-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Format: 1.8
Date: Mon, 12 Oct 2009 18:12:18 +0900
Source: mummer
Binary: mummer mummer-doc
Architecture: source all amd64
Version: 3.22~dfsg-1
Distribution: unstable
Urgency: low
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Charles Plessy <plessy@debian.org>
Description:
mummer - Efficient sequence alignment of full genomes
mummer-doc - Documentation for MUMmer
Changes:
mummer (3.22~dfsg-1) unstable; urgency=low
.
* New upstream release:
3.22
- Significant 'dnadiff' bug fixes.
- Unaligned contig output format switched to match show-diff format.
- Dynamic memory allocation for run-mummer1.
- Turned off output of the near useless .cluster files from nucmer and
promer (let us know if you still want them).
3.21
- gcc compatibility fix.
* debian/get-orig-source: rename mutilated upstream tarball.
* debian/control:
- incremented Standards-Version to reflect concordance with Debian Policy
3.8.3 (no changes needed).
- mummer-docs depends on ${misc:Depends}.
- dropped versionned dependencies when they are even satisfied in oldstable.
- dropped dependency on CDBS and patchutils, and added dependency on quilt.
- using Debhelper 7 (debian/compat).
- build-depend on csh for correct interpreter path detection.
* debian/patches:
- replaces some Makefile patches by environment variables in debian/rules.
- replaced 02at_scripts.diff by separate files in sh-replacement-scripts.
- added a series file to use Quilt.
- dropped the patch ‘01sm_src_tigr.diff’ that allowed to use MUMmer on
computers with less that 512 Mo of memory and is now obsoleted by
this release.
- refreshed the 02at_docs_web.diff patch that redirects the links for the
suppressed PDF files to the upstream website.
* debian/rules converted to debhelper (the build system is too odd to be
handled gently by CDBS without patches).
* Mangled ‘~dfsg’ from the Debian version number in debian/watch.
* Converted debian/copyright to a machine-readable format.
* Documented the PDF deletion and the patching in ‘debian/README.source’.
* Turned the get-orig-source shell script into a debian/rule target.
* Added an experimental collection of upstream metadata in YAML format
(debian/upstream-metadata.yaml).
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Files:
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Accepted:
mummer-doc_3.22~dfsg-1_all.deb
to pool/main/m/mummer/mummer-doc_3.22~dfsg-1_all.deb
mummer_3.22~dfsg-1.diff.gz
to pool/main/m/mummer/mummer_3.22~dfsg-1.diff.gz
mummer_3.22~dfsg-1.dsc
to pool/main/m/mummer/mummer_3.22~dfsg-1.dsc
mummer_3.22~dfsg-1_amd64.deb
to pool/main/m/mummer/mummer_3.22~dfsg-1_amd64.deb
mummer_3.22~dfsg.orig.tar.gz
to pool/main/m/mummer/mummer_3.22~dfsg.orig.tar.gz
