-----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 1.8 Date: Tue, 02 Sep 2014 15:15:06 +0200 Source: arb Binary: arb libarb libarb-dev arb-common arb-doc Architecture: source amd64 all Version: 6.0.2-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org> Changed-By: Elmar Pruesse <elmar@pruesse.net> Description: arb - Graphical suite for phylogenetic sequence analysis arb-common - Graphical suite for phylogenetic sequence analysis (common files) arb-doc - Graphical suite for phylogenetic sequence analysis (documentation libarb - Graphical suite for phylogenetic sequence analysis (libraries) libarb-dev - Graphical suite for phylogenetic sequence analysis (development f Closes: 741890 757497 Changes: arb (6.0.2-1) unstable; urgency=medium . [ Andreas Tille ] * New upstream version Closes: #741890 * debian/upstream -> debian/upstream/metadata * debian/control: - Build-Depends: added libglib2.0-dev - Depends: added mafft, mrbayes * debian/rules - Add explicite --remove-section=.comment option to manual strip call * cme fix dpkg-control * arb-common.dirs: Do not create unneeded lintian dir * Add turkish debconf translation (thanks for the patch to Mert Dirik <mertdirik@gmail.com>) Closes: #757497 . [ Elmar Pruesse ] * patches removed: - 10_config.makefiles.patch, 80_no_GL.patch removed in favor of creating file from config.makefile.template via sed in debian/control - 20_Makefile_main.patch merged upstream - 21_Makefiles.patch no longer needed - 30_tmpfile_CVE-2008-5378.patch: merged upstream - 50_fix_gcc-4.8.patch: merged upstream - 40_add_libGLU.patch: libGLU not needed for arb_ntree) - 60_use_debian_packaged_raxml.patch: merged upstream - 70_hardening.patch merged upstream - 72_add_math_lib_to_linker.patch does not appear to be needed * patches added: - 10_upstream_r12793__show_db_load_progress: backported patch showing progress while ARB is loading a database (needed as indicator/splash screen while ARB is launching) - 20_upstream_r12794__socket_permissions: backported security fix - 30_upstream_r12814__desktop_keywords: backported add keywords to desktop (fixes lintian warning) - 40_upstream_r12815__lintian_spelling: backported fix for lintian reported spelling errors - 50_private_nameservers change configuration to put nameservers into users home dirs (avoids need for shared writeable directory) - 60_use_debian_phyml use phyml from debian package for both interfaces in ARB * debian/rules: - create config.makefile from override_dh_configure target - use "make tarfile" in override_dh_install - remove extra cleaning not needed for ARB 6 - use "dh_install --list-missing" to avoid missing files - added override_dh_fixperms target * debian/control: - added libarb-dev package - Depends: added phyml, xdg-utils - Suggests: removed phyml - fix lintian duplicate-short-description (new descriptions) * debian/*.install: - "unrolled" confusing globbing to select files - pick files from debian/tmp - moved all config files to /etc/arb * debian/arb-common.templates: updated * scripts: - removed arb-add-pt-server - launch-wrapper: - only add demo.arb to newly created $ARBUSERDATA - pass commandline arguments through bin/arb wrapper - preinst: removing old PT server index files on upgrade from 5.5* - postinst: set setgid on shared PT dir * rewrote arb.1 manfile * added file icon for ARB databases * using upstream arb_tcp.dat Checksums-Sha1: d9b88d6010e9ad7de42340cfb0f0d102052ced72 2573 arb_6.0.2-1.dsc 54db2d2bcec89837c4ef8ca34bcf13f1ceecee50 13282105 arb_6.0.2.orig.tar.gz ea29a7a49296ea31dffe217a5dd285f984cdfd79 118628 arb_6.0.2-1.debian.tar.xz b6b0c530287b3f6ea5f03eb258b82c98bdbd021c 1968466 arb_6.0.2-1_amd64.deb e470e5c9e3c7f962f5924ea4710c7080fbeee287 578102 libarb_6.0.2-1_amd64.deb c8eb67d5300a19423dced59f58999f0ade2c80d9 401102 libarb-dev_6.0.2-1_amd64.deb 9033403259f598cf7b5945fc2346cb394726dea1 3566788 arb-common_6.0.2-1_all.deb cafb0063d1c8b942e92a94cb8e85dc56b971edad 279078 arb-doc_6.0.2-1_all.deb Checksums-Sha256: b49cf75e53735d8592522059a00429c920f540cb90a58f35743963646c1558b5 2573 arb_6.0.2-1.dsc 582faa70320dcad89e654d9c79cdf2944c301fbcca155ee7a75eb3461903b068 13282105 arb_6.0.2.orig.tar.gz e34de52ab83e308fa59e7c7a8e46e52de1f633b16b1e460597007bb136b7bffc 118628 arb_6.0.2-1.debian.tar.xz 62e71bb5496ca464f0ea50178a515c2f192249e746459f1d86e813454cd15631 1968466 arb_6.0.2-1_amd64.deb a405848a9e077c50bcb85e4c709dab1941721367b254090faa1718d844d777f1 578102 libarb_6.0.2-1_amd64.deb b1377c263bcd31234b0cfe6d79de35deda7f68a1615ad98dbc617cbcb2f8e6f4 401102 libarb-dev_6.0.2-1_amd64.deb c11d3943dd2de8d26194bd933fc1ebe8ec3c0882df47c6c71c1927d56aae3673 3566788 arb-common_6.0.2-1_all.deb 784a306bce2b01aa76c04a10ec9228955ec6db6cbcc13c996dbe70a228317be5 279078 arb-doc_6.0.2-1_all.deb Files: 549c93adabd15c7f5765f5917189e579 1968466 non-free/science optional arb_6.0.2-1_amd64.deb 5bca542984fb2f1782314d78607d5ce3 578102 non-free/science optional libarb_6.0.2-1_amd64.deb d916195a6d05ae21b5377ee29fb5dfd9 401102 non-free/libdevel optional libarb-dev_6.0.2-1_amd64.deb 095c3f4b0e2a2584a23903832f078fca 3566788 non-free/science optional arb-common_6.0.2-1_all.deb c46c7be758ae065a7b84d3f385a061b0 279078 non-free/doc optional arb-doc_6.0.2-1_all.deb c73b6bb54574617268014a6bf7b72441 2573 non-free/science optional arb_6.0.2-1.dsc a65c447a8e0b2b59b694aee46e8500a1 13282105 non-free/science optional arb_6.0.2.orig.tar.gz 3be244e5b3702ec13be0f49129130a0e 118628 non-free/science optional arb_6.0.2-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- Version: GnuPG v1 iQIcBAEBCgAGBQJUDq0oAAoJEFeKBJTRxkbRqB0P+gNAOGsFT/ANLN1QawKdReCN vdl4eU8dPCO8vvMZVX1lu335YhTYfMC9tPsXHYO0Vk2/W2My95UZyxu5UOcnQX2C /50VOEu62EcTEF8HFF8vuNhhF0DNYEVD+JRiGTwJU/bAvTdPJk11YSKQpKkFJUd1 ygpHn3Rf7zaw757wu2UNL8hPsDGRLvKKIFKYVAhGn/ttVbTTyMGiB9vGCuxQfyQh IhNUJHb6e9IJzs+3jY377b/bUWpiqytvWQ29EoqXsmGNUIzaxNvi0KNHTbxnq33b QhiPad0VQNH2V/WSbuX2HSuNl1Vbt8kNvay6GNQRIAtG7Db9ALFoo6GeXKl+XfaX iRawppsvNahm0H7PLZqU7kQlbqorY01GrabWKLZsPV4S7CQy71jz+SBTDea43WzQ nzUck7QWT/qEW3R1Z/Ep014Oq+4AqZPiHo6Qqj4GRWOJN5BlmIJMSf2U8mjTOrfS FJIZExxktl6SzR+9O8mSLKKFZFZ+49nFj0JJspMp2Y1BtB98WJarI8qJ3CgF/ytH I5h8CzWbEpPegqDKXd3i1QrFyNe2seWyoNBfdIhZifjvKQHwr1mkVz5D3kifUStc iCDkCLyRMtSjfjE5L6Nrx3M3pGXBLb4Zu8nSAqDZXpxdKvWtCy32aQJ2rT5aO7E+ X8kFzxquNVbDej83eHCP =SA1X -----END PGP SIGNATURE-----
