vcswatch reports that
this package seems to have a new changelog entry (version
2.3.4-1, distribution
UNRELEASED) and new commits
in its VCS. You should consider whether it's time to make
an upload.
Here are the relevant commit messages:
commit d0a3389ad36c2e8c106beffa935c8c1537490d83
Author: Andreas Tille <tille@debian.org>
Date: Mon Dec 7 17:22:24 2020 +0100
Close bug
commit 354ad798059b011d9d093e6413345d09d8ec34d8
Author: Andreas Tille <tille@debian.org>
Date: Mon Dec 7 17:18:03 2020 +0100
Update patches
commit 3f447ff5832b8c40748c2997c114505b697c7fc7
Merge: 7ad9491d a231a09a
Author: Andreas Tille <tille@debian.org>
Date: Mon Dec 7 17:15:07 2020 +0100
Update upstream source from tag 'upstream/2.3.4'
Update to upstream version '2.3.4'
with Debian dir 028a2042abe94c108e313207b215defd41eeffb8
commit a231a09a6a35d230aa48cad51bef33b63be3a81d
Author: Andreas Tille <tille@debian.org>
Date: Mon Dec 7 17:14:58 2020 +0100
New upstream version 2.3.4
commit 7ad9491d5302c424d8f5e8322fcb8dfa7534daa6
Author: Andreas Tille <tille@debian.org>
Date: Mon Dec 7 17:14:13 2020 +0100
routine-update: watch file standard 4
commit 41c9907d675a1f7021fd866383c658133e305dc8
Author: Andreas Tille <tille@debian.org>
Date: Mon Dec 7 17:13:51 2020 +0100
routine-update: Rules-Requires-Root: no
commit 1159640716109654a640f0c4277b37aa2439fbb7
Author: Andreas Tille <tille@debian.org>
Date: Mon Dec 7 17:13:51 2020 +0100
routine-update: Add salsa-ci file
commit 3fead78e1394ceab5a3d068c506c4dc50eec2cd5
Author: Andreas Tille <tille@debian.org>
Date: Mon Dec 7 17:13:51 2020 +0100
routine-update: Do not parse d/changelog
commit bf7634c038acaa467e0b7ede6a7b6dd23e2e72d8
Author: Andreas Tille <tille@debian.org>
Date: Mon Dec 7 17:11:13 2020 +0100
routine-update: Remove trailing whitespace in debian/rules
commit 0e84704cc81304368b122a5092c0084c7985d209
Author: Andreas Tille <tille@debian.org>
Date: Mon Dec 7 17:11:13 2020 +0100
routine-update: Remove trailing whitespace in debian/changelog
commit 9b9eb36482236ca8586175cdd0ae73a2d645fe8e
Author: Andreas Tille <tille@debian.org>
Date: Mon Dec 7 17:11:13 2020 +0100
routine-update: Secure URI in copyright format
commit 7add5ad1228dcdeceb94049014eb3d9aa3ec70ba
Author: Andreas Tille <tille@debian.org>
Date: Mon Dec 7 17:09:32 2020 +0100
routine-update: debhelper-compat 13
commit 0b982d2d6b6d426f67ae473f51bae6c04081bbe4
Author: Andreas Tille <tille@debian.org>
Date: Mon Dec 7 17:09:32 2020 +0100
routine-update: Standards-Version: 4.5.1
commit 2a9cd75ae41fb860800f71b2244ce7d431bbfa5a
Author: Andreas Tille <tille@debian.org>
Date: Mon Dec 7 16:37:23 2020 +0100
routine-update: New upstream version
commit c7453e3809bf098e2ef7ae55ea2980b26fec9ab8
Author: Andreas Tille <tille@debian.org>
Date: Mon Dec 7 16:36:36 2020 +0100
Remove debian/gbp.conf
commit 4cf00f6045a3f1c7a6fe4a19ddc655dea5a4115f
Author: Andreas Tille <tille@debian.org>
Date: Mon Dec 7 16:36:08 2020 +0100
Take over package into Debian Med team maintenance
commit ea5551ddecc84119cb14875cd4b00503abbac81a
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Fri Mar 9 02:48:21 2012 +0000
ENH: Manually merged Kent's changes for decoupling I/O from algorithm.
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1193 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit d10d9a05c83916b56a9a671a746bc10d0be41a8b
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Thu Mar 8 00:14:17 2012 +0000
STYLE: Minor style improvements for ITKv4.
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1192 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 0d4124a6187a74020198726df997b011e2560e83
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Thu Mar 8 00:14:16 2012 +0000
ENH: Prepare for merge with svn master.
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1191 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 9957c1fa5dccda0161b8d80745ef1b419ebc3832
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Thu Mar 8 00:14:14 2012 +0000
ENH: Moved fixed & moving file IO out of helper class
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1190 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 0cf0261daf7902653dd121fcd232241252531b8f
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Thu Mar 8 00:14:09 2012 +0000
ENH: Add method to use images instead of image filenames for fixed and moving images
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1189 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit ec3bec2423e08cacc16471f9c47c0a92c625af23
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Thu Mar 8 00:14:02 2012 +0000
ENH: Initialized variables deterministically
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1188 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit f287ec6d4c2289fd4bd7ee9fd90868bd202b6b83
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Thu Mar 8 00:13:53 2012 +0000
BUG: wasn't setting histogram match
ENH: allow setting output for logging to other than std::cout
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1187 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 793dd2cb07a9e5c7f7359c7fcddb82ebf3be1f80
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Thu Mar 8 00:13:51 2012 +0000
BUG: replaced status messages lost in refactoring
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1186 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit f1077b67b11d80987c7db79ccab5b0e1f004ce8b
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Thu Mar 8 00:13:50 2012 +0000
BUG: added printstate method & set more required parameters
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1185 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 58b6cd9691fc5ec05f1d450e94fdc6f05c743b7d
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Thu Mar 8 00:13:48 2012 +0000
ENH: Instrumented with debugging statements.
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1184 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 6d632434e863db596e5b940131b0550b18e36d19
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Thu Mar 8 00:13:47 2012 +0000
BUG: Ordering error caused some variable to be uninitialized.
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1183 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit e344641230d6454f25405ce0ab277d5ac17d4daa
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Thu Mar 8 00:13:45 2012 +0000
DOC: Change name to SyN to match documentation.
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1182 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 0814da0d000fbc49cbabac28df29a5e5d3a72f29
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Thu Mar 8 00:13:44 2012 +0000
BUG: Command line arg was not propogated properly
STYlE: Removed shadow typedef warnings by
renaming the local enumeration type.
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1181 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit e20bdcba821d76920db4bd08a48f2e9f79623f65
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Thu Mar 8 00:13:42 2012 +0000
ENH: added methods to retrieve results from registrationHelper
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1180 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit dfafad5396e92a0d2aa764e0c4050b645a5eca74
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Thu Mar 8 00:13:40 2012 +0000
ENH: Make itk::ants::RegistrationHelper a template class, add interface to retrieve transform and warped images after calling doRegistration.
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1179 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit ac9bc01d55de3048c76ada0f66b5afb5a6084d72
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Thu Mar 8 00:13:39 2012 +0000
COMP: Made RegistrationHelper class templated
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1178 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit cec33af9d0ab6c2bce055adf4c4d5001791c9414
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Thu Mar 8 00:13:37 2012 +0000
COMP: Finished up on re-doing antsRegistration
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1177 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 35d050ae7934a6d6b8e5e80274c375c8555bf1ec
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Thu Mar 8 00:13:35 2012 +0000
COMP: Remove SetDo(Fixed|Moving)ImagePreWarp calls
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1176 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 1f139ae5dd568a2002fd0f75315788fa6161399f
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Thu Mar 8 00:13:34 2012 +0000
ENH: Beginning to re-write antsRegistration
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1175 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit abc9d255cedddce19f960b54062a3ed7201cb1a9
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Thu Mar 8 00:13:32 2012 +0000
ENH: added itkantsRegistrationHelper class
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1174 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 0cfd1d589124410ed5e8477b55354b0caa11b688
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Thu Mar 8 00:13:27 2012 +0000
COMP: add nightly dashboard script
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1173 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit ec9cbbf0b8f63e5997909cb151485cb6a76abfc6
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Thu Mar 8 00:13:25 2012 +0000
COMP: Removed as many of the warnings generated by gcc 4.6 as possible
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1172 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit a8a397827ddc08cb50937516c7786ffee6249680
Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Wed Mar 7 20:47:15 2012 +0000
ENH: interface to multiple cgspca
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1171 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit e18d9103d778f9edad868dd4823bfe357d9305c6
Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Wed Mar 7 20:14:04 2012 +0000
ENH: interface to multiple cgspca
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1170 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 68ab4cea219a0d999bb3223e1438bdee13f69cc8
Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Wed Mar 7 19:53:56 2012 +0000
ENH: interface to multiple cgspca
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1169 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 04b5b5c9a45b4d60c18f36b205fe8813f9dd2c00
Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Wed Mar 7 18:33:52 2012 +0000
ENH: interface to multiple cgspca
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1168 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 77b8770cecaf9878eb9fff65f083e55b3d15d82f
Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Wed Mar 7 01:11:09 2012 +0000
ENH: to eigenanatomy algorithm nrepspervec and also network decomposition
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1167 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit e5153bf6ece844268cee84b7315e0bbd5966a449
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Tue Mar 6 03:03:27 2012 +0000
ENH: Remove deprecated ImagePreWarp optoins.
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1166 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 9675a627b00256d660290ddc4d8c19797681cd6e
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Tue Mar 6 02:32:16 2012 +0000
ENH: Updated ITK to latest merged fixes for registration.
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1165 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit c357236fdea0d43fe18cb1f9b99391fbbf0879e5
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Mon Mar 5 02:26:31 2012 +0000
ENH: Allow transforms to have .mat extensions.
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1164 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 072004af232b4fa8bd7cb0ca603c2dd6b8174033
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Sun Mar 4 22:01:27 2012 +0000
ENH: Updated ITK to include patch #12 from Nick Tustison's gerrit patch.
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1163 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit c4648ea405fc91f6f8904a0785a4f3f13b2c85c8
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Sun Mar 4 22:01:22 2012 +0000
COMP: Fixed compilation errors and warnings on clang.
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1162 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 6e675d46e4436f018d52fac3ddb9b650c4c82fa0
Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Fri Mar 2 22:53:58 2012 +0000
ENH: optimization restarting---improves reconstruction error and significance
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1161 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit b68bb6553ff77f9789384766988a89c47115d967
Author: ntustison <ntustison@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Fri Mar 2 19:44:22 2012 +0000
ENH: Facilitate double/float interchange.
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1160 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 9a1479cae79d2074ae66941cf7e96a5963381abc
Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Thu Mar 1 20:25:13 2012 +0000
ENH: Miccai results
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1159 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 33d72c412c035826393b45da9faed7fb59ab035b
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Thu Mar 1 17:11:22 2012 +0000
ENH: Updated to new version of antsResample.cxx with new ITKv4 features.
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1158 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit e70e4c51cbb0c19c253b26f235a960e9dfdbdf4d
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Thu Mar 1 17:11:19 2012 +0000
COMP: Added CTest for Iowa ANTS Dashboard
COMP: Removed a couple of warnings
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1157 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 8ba28f34cd9532437cc188cc6c69cf5c846f77e6
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Thu Mar 1 17:11:15 2012 +0000
COMP: Removed as many of the warnings generated by gcc 4.6 as possible
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1156 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 6e405e90868497bba13956da9ee9defd23c111aa
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Thu Mar 1 17:11:02 2012 +0000
COMP: remove obsolete flag from VTK Config so gcc 4.3+ & llvm-gcc work on OS X
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1155 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 45d54844eb9b53d8071538bb965bd9be0958e556
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Wed Feb 29 14:14:44 2012 +0000
COMP: Need to limit scope of variables in switch
This error occurs when a vairable declared inside
a switch statement is not explicitly limited to one case.
error: switch case is in protected scope
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1154 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 3b6348e7215c1733cb37aa1f87eefb95d93eec40
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Wed Feb 29 14:14:41 2012 +0000
STYLE: Re-formatted all files to match ITK style
The intent of this patchset is to clean the files
to make them KWSTYLE compliant with the ITKv4 style checker
The goal of this script is to develop a consistent system of
auto-formating and format testing such that if uncrustify is run,
then the code will pass the KWStyle format checker
http://www.itk.org/Wiki/ITKv4_StyleChangeProposal
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1153 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 87c0dfdc7d5865f9e10c837c31c51303925f0e39
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Wed Feb 29 02:39:17 2012 +0000
COMP: get rid of CLang compiler warnings
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1152 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 0f1c6f0303a32be1ac0dfd476c644998b9ecceb3
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Wed Feb 29 02:38:56 2012 +0000
COMP: Change baseline metrics so as to get passing tests
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1151 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 294be2f76db2eafd2d72f568b6cea4e36bef1f83
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Wed Feb 29 02:38:52 2012 +0000
COMP: Address compiler warnings.
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1150 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 4fb624170fdb8fab3dde9ae7b9755880812ab918
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Wed Feb 29 02:38:33 2012 +0000
COMP: Reformat add_test commands to make them more readable.
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1149 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 4160ff2866475fce38b4b0e5241f1a1098f48893
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Mon Feb 27 20:57:47 2012 +0000
COMP: mistake image filename in top level make causing several test failures with segfault
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1148 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 8ca4b388cf5281adad81d1565433af385509adca
Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Sun Feb 26 20:18:22 2012 +0000
ENH: add line search to greedy eanat
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1147 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 067f191e6e84ced1ed62a69cadddcf8eba52a71d
Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Sun Feb 26 19:39:59 2012 +0000
ENH: add line search to greedy eanat
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1146 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 5764313edcd0a3614630d4fa6c92491e4ff393cd
Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Sun Feb 26 19:38:53 2012 +0000
ENH: add line search to greedy eanat
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1145 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 208b3918abfd9c1269fecb73cc4a2740e65d4505
Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Fri Feb 24 05:02:30 2012 +0000
ENH: compute err metric for matrix approx
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1144 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 0d49b923dec4dad155d7a60f47140275679e908f
Author: mstauff <mstauff@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Thu Feb 23 19:06:52 2012 +0000
Add CreateDisplacementField
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1143 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit dc4c981779618e6c9c84a98aeb48691a7bf40dcb
Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Thu Feb 23 17:41:16 2012 +0000
ENH: add permutation test to sccan network
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1142 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit a35703a419f7e708bdae32a57899659863758a70
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Wed Feb 22 19:22:56 2012 +0000
COMP: Default values fixed
Default values for member functions need to be defined
in declaration rather than in definition.
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1141 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 6596aff14dea23414f3971f0a4559b9e86e497d4
Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Wed Feb 22 19:22:54 2012 +0000
ENH: added vtk build
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1140 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit adb5fb510d2ea0827e868bba0367f50aae536ab6
Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Wed Feb 22 18:35:36 2012 +0000
WIP: ntwk updates & err metric
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1139 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit e395e3171960680635497f29c0037162778cb5bc
Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Wed Feb 22 17:47:24 2012 +0000
WIP: ntwk updates & err metric
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1138 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 32d85e6de2d07e3d8c824dfc4b0ce8cfe5f5f8ea
Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Wed Feb 22 12:34:36 2012 +0000
ENH: ntwk decom
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1137 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 8b0953c008500a65b12fd6d0352c9b9bb5764892
Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Wed Feb 22 05:18:55 2012 +0000
ENH: ntwk decom
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1136 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 9e0b8b04d2079c87edb2c46ceff431eaa62de104
Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Tue Feb 21 00:00:57 2012 +0000
ENH: improved line search
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1135 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 99b1c87f5b3c3905a3e698386ba7726d6f307469
Author: cookpa <cookpa@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Mon Feb 20 23:14:34 2012 +0000
Add ITK thread limit to all qsub jobs
Added line to delete qsub jobs if CTRL+C is pressed during execution
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1134 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 8156a81fe6f2d5bb242daeca76f233691d717c61
Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Mon Feb 20 18:03:49 2012 +0000
ENH: improved line search
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1133 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit ab663075e1d85fb49b9544e7a557e2cc3db2fbb0
Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Sun Feb 19 04:26:21 2012 +0000
WIP: nlcgspca --- updated / tested + BUG fix for dvbyzero in greedy approach
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1132 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 433718b47bf20398d21a56c8ab61b709d43a2d46
Author: ntustison <ntustison@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Sat Feb 18 14:36:43 2012 +0000
ENH: fixing transform compatibilities with ANTS.
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1131 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 5a15daa58d84b9b79d23b818cd758b8fbec6d12e
Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Thu Feb 16 03:51:00 2012 +0000
WIP: ...
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1130 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 375313d7e22bda8d2f802d28b4708725b14e344b
Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Tue Feb 14 04:47:16 2012 +0000
ENH: prep for additional sccan algorithms + BUG fix when used w/o mask
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1129 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit f8ef5766b70027a3d923b27a8499420492de7a9e
Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Tue Feb 14 03:57:26 2012 +0000
ENH: prep for additional sccan algorithms + BUG fix when used w/o mask
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1128 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 71301de70607778b992cac631e448ec1566f41b6
Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Mon Feb 13 16:20:28 2012 +0000
WIP: some additional algorithms for sccan and change to input options
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1127 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 5ef722a1debbe9d0ae83a5c6371ab433e8ad2dbc
Author: ntustison <ntustison@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Mon Feb 13 01:57:26 2012 +0000
BUG: Fixed compilation warnings.
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1126 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit e857755ee9ee25c1f8f1a8ca6a2b73dc0bead9a6
Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Sat Feb 11 01:03:38 2012 +0000
ENH: 2 - further refactoring toward a pure gradient based optimization
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1125 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 33a6e60a60cea26ef2ece11c2c714f57a36702fc
Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Fri Feb 10 01:59:14 2012 +0000
ENH: writing out eigenvalues, also updating optimization with proper gradient (rather than greedy) formulation
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1124 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 5c3cac8d72f14edc383d9119ba7ccaffbe11732c
Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Fri Feb 10 00:47:04 2012 +0000
ENH: writing out eigenvalues, also updating optimization with proper gradient (rather than greedy) formulation
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1123 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 0f98a149d12f824bcbb6cd3f62d6b68257798e61
Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Wed Feb 8 23:08:22 2012 +0000
ENH: enable projection of the warp along a direction
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1122 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit a927e91a6bc17b1eedb77140f017505924bc90fd
Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Sat Feb 4 22:23:15 2012 +0000
BUG: need to downsample currently due to shortcomings of composite transform
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1121 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 876a1a330f905c50f37262acca4ffec208c8a994
Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Sat Feb 4 22:06:41 2012 +0000
BUG: need proper affie transform
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1120 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 35704610bb7bd8baf8121b91185947b8a43fc237
Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Sat Feb 4 20:56:56 2012 +0000
ENH: cc image metric update
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1119 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 5fc867740481fcd966e863b204f62e7481d93127
Author: ntustison <ntustison@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Fri Feb 3 23:11:29 2012 +0000
BUG: Restored HSV and Jet colormaps.
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1118 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit f289a85dfa71cb3ce2df89df6b2c6817abd8d98a
Author: ntustison <ntustison@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Fri Feb 3 00:39:36 2012 +0000
ENH: Fixed pathing to output directory.
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1117 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 20d59d90a541517ee2c8de7e1b5f745db8433e3e
Author: ntustison <ntustison@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Fri Feb 3 00:39:32 2012 +0000
ENH: Remove BRAINS References.
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1116 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 2464754aadc81d96e4aca102832c680f2a49c9a3
Author: ntustison <ntustison@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Fri Feb 3 00:39:27 2012 +0000
STYLE: Made whitespace consistent
Replaced seemingly random tabs with consistent spaces.
Removed end of line white-space.
Removed execute mode on source code files.
Added execute mode on shell files.
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1115 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 747d529f09fe585006d0eb95ac8ee779665eeab9
Author: ntustison <ntustison@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Fri Feb 3 00:38:16 2012 +0000
STYLE: Converted cmake directives to lower case
CMake documentation now uses lower case lettering
for it's directives. This patch set makes
cmake directives consistent with documentation.
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1114 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 720bf60e4f48df7725989fb34f6cba590bfd5f2c
Author: ntustison <ntustison@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Fri Feb 3 00:38:10 2012 +0000
COMP: First attempt at adding SuperBuild
This add the superbuild system that has been
refined to accomplish several goals. It is
more fully featured than is needed for the
simplest of ANTS superbuild systems.
The reason is that it very closely parallels
the superbuild system requirements that allow
this project to be added to the Slicer package,
and has been shown extensible and useful for the BRAINSTools
spharm-pdm and other packages.
Every attempt has been made to make this a generic
infrastructure that can be dropped on top of an existing
package, and with minimal editing add the superbuild system.
The differences from the BRAINSTools implementation include the
folowing:
1) Change LOCAL_PROJECT_NAME from "BRAINSTools" to "ANTS"
2) Remove custom BRAINSTools dependancy generation.
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1113 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 3bb3591cbdf1593087ce64e3669db9fc5ffd953b
Author: ntustison <ntustison@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Fri Feb 3 00:38:00 2012 +0000
COMP: Fixed clang compilation issues
The clang compiler is more stringent than most.
ANTS/Examples/../ImageRegistration/ANTS_affine_registration2.h:728:6: error: redefinition of 'GetAffineTransformFromImage'
ANTS/Examples/../ImageRegistration/ANTS_affine_registration2.h:701:43: error: call to function 'ShrinkImageToScale' that is neither visible in the template definition nor found by argument-dependent lookup
ANTS/Examples/../Utilities/itkDiReCTImageFilter953.hxx:1133:25: error: default arguments cannot be added to an out-of-line definition of a member of a class template
ANTS/Examples/../Utilities/itkDiReCTImageFilter953.hxx:1182:25: error: default arguments cannot be added to an out-of-line definition of a member of a class template
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1112 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 2f2e766e26e1045a3b4812927d8e3ff6ed12c493
Author: ntustison <ntustison@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Fri Feb 3 00:37:52 2012 +0000
COMP: Fix compiler error
itkPICSLAdvancedNormalizationToolKit.hxx:291:64: error: default
arguments cannot be added to an out-of-line definition of a member of a
class template
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1111 fd2da0a4-d968-48df-9cb5-d8c496287cbf
commit 51e38346f806f14fa8ce19cc9ebdbb022db57f2c
Author: ntustison <ntustison@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
Date: Fri Feb 3 00:37:47 2012 +0000
ENH: Added more complete notes on using svn and git together.
git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1110 fd2da0a4-d968-48df-9cb5-d8c496287cbf
The Vcs URL is using anonscm.debian.org. Please update it for the move to salsa.debian.org.