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bamtools

toolkit for manipulating BAM (genome alignment) files

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general

source: bamtools (main)
version: 2.5.2+dfsg-6
maintainer: Debian Med Packaging Team (archive) (DMD) (LowNMU)
uploaders: Étienne Mollier [DMD] – Andreas Tille [DMD] – Kevin Murray [DMD] – Michael R. Crusoe [DMD]
arch: all any
std-ver: 4.7.0
VCS: Git (Browse, QA)

versions [more versions can be listed by madison] [old versions available from snapshot.debian.org]

[pool directory]

o-o-stable: 2.5.1+dfsg-3
oldstable: 2.5.1+dfsg-9
stable: 2.5.2+dfsg-4
testing: 2.5.2+dfsg-6
unstable: 2.5.2+dfsg-6

versioned links

2.5.1+dfsg-3: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
2.5.1+dfsg-9: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
2.5.2+dfsg-4: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
2.5.2+dfsg-6: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]

binaries

bamtools (1 bugs: 0, 1, 0, 0)
libbamtools-dev
libbamtools-doc
libbamtools2.5.2

action needed

A new upstream version is available: 2.5.3 high

A new upstream version 2.5.3 is available, you should consider packaging it.

Created: 2025-05-20 Last update: 2025-06-16 12:00

debian/patches: 1 patch to forward upstream low

Among the 5 debian patches available in version 2.5.2+dfsg-6 of the package, we noticed the following issues:

1 patch where the metadata indicates that the patch has not yet been forwarded upstream. You should either forward the patch upstream or update the metadata to document its real status.

Created: 2023-02-26 Last update: 2024-07-13 00:05

Build log checks report 2 warnings low

Build log checks report 2 warnings

Created: 2018-04-05 Last update: 2018-04-13 02:11

Standards version of the package is outdated. wishlist

The package should be updated to follow the last version of Debian Policy (Standards-Version 4.7.2 instead of 4.7.0).

Created: 2025-02-21 Last update: 2025-02-27 13:24

news

[2024-07-14] bamtools 2.5.2+dfsg-6 MIGRATED to testing (Debian testing watch)
[2024-07-12] Accepted bamtools 2.5.2+dfsg-6 (source) into unstable (Andreas Tille)
[2023-12-18] bamtools 2.5.2+dfsg-5 MIGRATED to testing (Debian testing watch)
[2023-12-18] bamtools 2.5.2+dfsg-5 MIGRATED to testing (Debian testing watch)
[2023-12-15] Accepted bamtools 2.5.2+dfsg-5 (source) into unstable (Étienne Mollier)
[2022-12-22] bamtools 2.5.2+dfsg-4 MIGRATED to testing (Debian testing watch)
[2022-12-22] bamtools 2.5.2+dfsg-4 MIGRATED to testing (Debian testing watch)
[2022-12-19] Accepted bamtools 2.5.2+dfsg-4 (source) into unstable (Étienne Mollier)
[2022-12-04] bamtools 2.5.2+dfsg-3 MIGRATED to testing (Debian testing watch)
[2022-12-02] Accepted bamtools 2.5.2+dfsg-3 (source) into unstable (Andreas Tille)
[2022-09-05] bamtools 2.5.2+dfsg-2 MIGRATED to testing (Debian testing watch)
[2022-09-04] Accepted bamtools 2.5.2+dfsg-2 (source) into unstable (Andreas Tille) (signed by: Étienne Mollier)
[2022-09-04] Accepted bamtools 2.5.2+dfsg-1 (source amd64 all) into experimental, experimental (Debian FTP Masters) (signed by: Andreas Tille)
[2021-11-09] bamtools 2.5.1+dfsg-10 MIGRATED to testing (Debian testing watch)
[2021-11-06] Accepted bamtools 2.5.1+dfsg-10 (source) into unstable (Étienne Mollier)
[2021-04-21] bamtools 2.5.1+dfsg-9 MIGRATED to testing (Debian testing watch)
[2021-04-15] Accepted bamtools 2.5.1+dfsg-9 (source) into unstable (Andreas Tille)
[2021-01-29] bamtools 2.5.1+dfsg-8 MIGRATED to testing (Debian testing watch)
[2021-01-27] Accepted bamtools 2.5.1+dfsg-8 (source) into unstable (Andreas Tille)
[2020-05-31] bamtools 2.5.1+dfsg-7 MIGRATED to testing (Debian testing watch)
[2020-05-29] Accepted bamtools 2.5.1+dfsg-7 (source) into unstable (Andreas Tille)
[2020-05-29] bamtools 2.5.1+dfsg-6 MIGRATED to testing (Debian testing watch)
[2020-05-27] Accepted bamtools 2.5.1+dfsg-6 (source) into unstable (Andreas Tille)
[2019-12-16] bamtools 2.5.1+dfsg-5 MIGRATED to testing (Debian testing watch)
[2019-12-11] Accepted bamtools 2.5.1+dfsg-5 (source) into unstable (Andreas Tille)
[2018-04-11] bamtools 2.5.1+dfsg-3 MIGRATED to testing (Debian testing watch)
[2018-04-10] bamtools 2.5.1+dfsg-3 MIGRATED to testing (Debian testing watch)
[2018-04-05] Accepted bamtools 2.5.1+dfsg-3 (source) into unstable (Andreas Tille)
[2018-04-04] Accepted bamtools 2.5.1+dfsg-2 (source amd64 all) into unstable, unstable (Michael R. Crusoe) (signed by: Andreas Tille)
[2018-04-02] Accepted bamtools 2.5.1+dfsg-1 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)

1
2

bugs [bug history graph]

all: 1
RC: 0
I&N: 1
M&W: 0
F&P: 0
patch: 0

links

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version: 2.5.2+dfsg-6build1

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