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bcbio

toolkit for analysing high-throughput sequencing data

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general
  • source: bcbio (contrib)
  • version: 1.2.4-2
  • maintainer: Debian Med Packaging Team (archive) (DMD) (LowNMU)
  • uploaders: Steffen Moeller [DMD]
  • arch: all
  • std-ver: 4.5.0
  • VCS: Git (Browse, QA)
versions [more versions can be listed by madison] [old versions available from snapshot.debian.org]
[pool directory]
  • stable: 1.1.2-3
  • unstable: 1.2.4-2
versioned links
  • 1.1.2-3: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
  • 1.2.0-2: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
  • 1.2.4-2: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
binaries
  • bcbio
  • python3-bcbio
action needed
A new upstream version is available: 1.2.5 high
A new upstream version 1.2.5 is available, you should consider packaging it.
Created: 2021-01-13 Last update: 2021-01-15 18:01
The package has not entered testing even though the delay is over normal
The package has not entered testing even though the 5-day delay is over. Check why.
Created: 2020-11-11 Last update: 2021-01-15 23:34
version in VCS is newer than in repository, is it time to upload? normal
vcswatch reports that this package seems to have a new changelog entry (version 1.2.4-3, distribution UNELEASED) and new commits in its VCS. You should consider whether it's time to make an upload.

Here are the relevant commit messages:
commit a48982aa7bca71129decc931487c09ef30496119
Author: Steffen Moeller <moeller@debian.org>
Date:   Sun Dec 13 15:24:43 2020 +0100

    TL;DR for d/TODO

commit 097a6fd6f3b31b588aa034a942d480a124352aaa
Author: Steffen Moeller <moeller@debian.org>
Date:   Mon Dec 7 18:40:30 2020 +0100

    Added build dependencies

commit a2aa99d1c867b16da50e1c57d3d65dbf7cbb2ed0
Author: Steffen Moeller <moeller@debian.org>
Date:   Mon Dec 7 18:40:02 2020 +0100

    Extended paths available for testing

commit d94cceaa36d209359b470b29278d2fac746f2901
Author: Steffen Möller <moeller@debian.org>
Date:   Wed Dec 2 22:24:08 2020 +0000

    Update TODO

commit c27884029a9a7e15d9292117572dd116c1a143ca
Author: Steffen Moeller <moeller@debian.org>
Date:   Mon Nov 23 16:14:38 2020 +0100

    Refinements after introducing gsort

commit 50ace2d97dffa89c7175c39a1f0edf608f971443
Author: Steffen Moeller <moeller@debian.org>
Date:   Sat Nov 14 22:30:48 2020 +0100

    cnvkit executable now found without further ado

commit e23c8f362fb33cc9a54dd755e132f2c961ca6d49
Author: Steffen Moeller <moeller@debian.org>
Date:   Fri Nov 13 23:16:13 2020 +0100

    Series of updates.
Created: 2020-11-14 Last update: 2021-01-14 16:04
lintian reports 21 warnings normal
Lintian reports 21 warnings about this package. You should make the package lintian clean getting rid of them.
Created: 2020-07-29 Last update: 2020-10-22 04:31
Standards version of the package is outdated. wishlist
The package should be updated to follow the last version of Debian Policy (Standards-Version 4.5.1 instead of 4.5.0).
Created: 2020-11-17 Last update: 2020-11-17 05:41
testing migrations
  • excuses:
    • Migration status for bcbio (- to 1.2.4-2): BLOCKED: Rejected/violates migration policy/introduces a regression
    • Issues preventing migration:
    • autopkgtest for bcbio/1.2.4-2: amd64: No test results, arm64: No test results, armhf: No test results, i386: No test results, ppc64el: Regression ♻
    • Additional info:
    • Cannot be tested by piuparts (not a blocker) - (no link yet)
    • 71 days old (needed 5 days)
    • Not considered
news
[rss feed]
  • [2020-11-06] Accepted bcbio 1.2.4-2 (source) into unstable (Andreas Tille)
  • [2020-09-25] Accepted bcbio 1.2.4-1 (source) into unstable (Steffen Moeller)
  • [2020-08-29] bcbio REMOVED from testing (Debian testing watch)
  • [2020-08-29] bcbio REMOVED from testing (Debian testing watch)
  • [2020-06-14] bcbio 1.2.0-2 MIGRATED to testing (Debian testing watch)
  • [2020-03-11] Accepted bcbio 1.2.0-2 (source) into unstable (Andreas Tille)
  • [2020-02-25] Accepted bcbio 1.2.0-1 (source all) into unstable (Steffen Moeller)
  • [2020-02-14] Accepted bcbio 1.1.9-2 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
  • [2019-12-11] Accepted bcbio 1.1.9-1 (source) into unstable (Steffen Moeller)
  • [2019-11-26] Accepted bcbio 1.1.8-1 (source) into unstable (Steffen Moeller)
  • [2019-11-08] Accepted bcbio 1.1.7-1 (source all) into unstable, unstable (Steffen Moeller)
  • [2019-08-14] Accepted bcbio 1.1.5-1 (source all) into unstable (Steffen Moeller)
  • [2019-04-14] Accepted bcbio 1.1.4-1 (source all) into unstable (Steffen Moeller)
  • [2019-03-21] Accepted bcbio 1.1.3-1 (source all) into unstable (Michael R. Crusoe) (signed by: Steffen Moeller)
  • [2019-01-29] bcbio 1.1.2-3 MIGRATED to testing (Debian testing watch)
  • [2019-01-23] Accepted bcbio 1.1.2-1 (source all) into unstable, unstable (Steffen Moeller)
  • [2019-01-23] Accepted bcbio 1.1.2-3 (source all) into unstable, unstable (Steffen Moeller)
  • [2019-01-23] Accepted bcbio 1.1.2-2 (source all) into unstable, unstable (Steffen Moeller)
bugs [bug history graph]
  • all: 1
  • RC: 0
  • I&N: 1
  • M&W: 0
  • F&P: 0
  • patch: 0
links
  • homepage
  • lintian (0, 21)
  • buildd: logs, clang
  • popcon
  • browse source code
  • edit tags
  • other distros
  • screenshots
  • debci
ubuntu Ubuntu logo [Information about Ubuntu for Debian Developers]
  • version: 1.2.4-2

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