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bedtools

suite of utilities for comparing genomic features

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general

source: bedtools (source, science)
version: 2.26.0+dfsg-3
maintainer: Debian Med Packaging Team (archive) [DMD] [LowNMU]
uploaders: Andreas Tille [DMD] – Charles Plessy [DMD]
arch: all any
std-ver: 3.9.8
VCS: Git (Browse)

versions [more versions can be listed by madison] [old versions available from snapshot.debian.org]

[pool directory]

o-o-stable: 2.16.1-1
oldstable: 2.21.0-1
stable: 2.26.0+dfsg-3
testing: 2.26.0+dfsg-3
unstable: 2.26.0+dfsg-3

versioned links

2.16.1-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
2.21.0-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
2.26.0+dfsg-3: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]

binaries

bedtools
bedtools-test

action needed

Marked for autoremoval on 01 August: 865008

high

Version of bedtools is marked for autoremoval from testing on Tue 01 Aug 2017. It depends (transitively) on samtools, affected by 865008. You should try to prevent the removal by fixing these RC bugs.

Created: 2017-06-25 Last update: 2017-06-27 13:24

Debci reports failed tests (log)

high

Debci reports test failures (log).

The tests ran in 0h 0m 28s

Last run: 2017-06-27 05:35:20

Previous status: fail

Created: 2014-10-26 Last update: 2017-06-27 13:24

lintian reports 115 warnings

normal

Lintian reports 115 warnings about this package. You should make the package lintian clean getting rid of them.

Created: 2015-03-02 Last update: 2017-06-21 07:14

Multiarch hinter reports 1 issue(s)

low

There are issues with the multiarch metadata for this package.

bedtools-test could be marked Multi-Arch: foreign

Created: 2016-09-14 Last update: 2017-06-27 13:28

Build log checks report 2 warnings

low

Build log checks report 2 warnings

Created: 2014-07-02 Last update: 2014-07-02 18:05

news

[2016-11-26] bedtools 2.26.0+dfsg-3 MIGRATED to testing (Debian testing watch)
[2016-11-07] Accepted bedtools 2.26.0+dfsg-3 (source) into unstable (Charles Plessy)
[2016-08-12] Accepted bedtools 2.26.0+dfsg-2 (source amd64 all) into unstable (Andreas Tille)
[2016-07-18] Accepted bedtools 2.26.0+dfsg-1 (source amd64 all) into unstable (Charles Plessy) (signed by: Andreas Tille)
[2015-09-10] bedtools 2.25.0-1 MIGRATED to testing (Britney)
[2015-09-04] Accepted bedtools 2.25.0-1 (source all amd64) into unstable (Charles Plessy)
[2015-07-22] bedtools 2.24.0-2 MIGRATED to testing (Britney)
[2015-07-16] Accepted bedtools 2.24.0-2 (source amd64 all) into unstable (Andreas Tille)
[2015-07-07] Accepted bedtools 2.24.0-1 (source all amd64) into unstable (Andreas Tille)
[2014-09-29] bedtools 2.21.0-1 MIGRATED to testing (Britney)
[2014-09-23] Accepted bedtools 2.21.0-1 (source amd64 all) into unstable (Charles Plessy)
[2014-07-25] bedtools 2.20.1-1 MIGRATED to testing (Britney)
[2014-06-06] Accepted bedtools 2.20.1-1 (source amd64 all) (Andreas Tille)
[2014-05-09] Accepted bedtools 2.19.1-2 (source amd64 all) (Andreas Tille)
[2014-03-31] bedtools 2.19.1-1 MIGRATED to testing (Debian testing watch)
[2014-03-25] Accepted bedtools 2.19.1-1 (source all amd64) (Charles Plessy)
[2014-02-26] bedtools 2.19.0-1 MIGRATED to testing (Debian testing watch)
[2014-02-16] Accepted bedtools 2.19.0-1 (source amd64) (Charles Plessy)
[2013-05-05] bedtools 2.17.0-1 MIGRATED to testing (Debian testing watch)
[2012-11-04] Accepted bedtools 2.17.0-1 (source amd64) (Charles Plessy)
[2012-03-27] bedtools 2.16.1-1 MIGRATED to testing (Debian testing watch)
[2012-03-16] Accepted bedtools 2.16.1-1 (source amd64) (Charles Plessy)
[2012-01-21] bedtools 2.15.0-1 MIGRATED to testing (Debian testing watch)
[2012-01-11] Accepted bedtools 2.15.0-1 (source amd64) (Charles Plessy)
[2011-11-15] bedtools 2.14.3-1 MIGRATED to testing (Debian testing watch)
[2011-11-05] Accepted bedtools 2.14.3-1 (source amd64) (Charles Plessy)
[2011-11-03] Accepted bedtools 2.14.2-1 (source amd64) (Charles Plessy)
[2011-11-03] Accepted bedtools 2.14.1-1 (source amd64) (Charles Plessy)
[2011-10-29] Accepted bedtools 2.13.4-1 (source amd64) (Charles Plessy)
[2011-10-16] bedtools 2.13.3-1 MIGRATED to testing (Debian testing watch)

1
2

bugs [bug history graph]

all: 1
RC: 0
I&N: 1
M&W: 0
F&P: 0

links

homepage
lintian (0, 115)
buildd: logs, checks, clang, reproducibility
popcon
browse source code
edit tags
screenshots

ubuntu

[Information about Ubuntu for Debian Developers]

version: 2.26.0+dfsg-3

Debian Package Tracker — Copyright 2013-2016 The Distro Tracker Developers

Report problems to the tracker.debian.org pseudo-package in the Debian BTS.

Documentation — Git Repository — How to contribute