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bowtie

Ultrafast memory-efficient short read aligner

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general
  • source: bowtie (main)
  • version: 1.3.1-1
  • maintainer: Debian Med Packaging Team (archive) (DMD) (LowNMU)
  • uploaders: Stephan Struckmann [DMD] – Ognyan Kulev [DMD] – Alexandre Mestiashvili [DMD] – Steffen Moeller [DMD] – Andreas Tille [DMD]
  • arch: all alpha arm64 mips64el ppc64 ppc64el s390x sparc64
  • std-ver: 4.6.0
  • VCS: Git (Browse, QA)
versions [more versions can be listed by madison] [old versions available from snapshot.debian.org]
[pool directory]
  • oldstable: 1.2.2+dfsg-4
  • stable: 1.3.0+dfsg1-1
  • testing: 1.3.1-1
  • unstable: 1.3.1-1
versioned links
  • 1.2.2+dfsg-4: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
  • 1.3.0+dfsg1-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
  • 1.3.1-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
binaries
  • bowtie
  • bowtie-examples
action needed
lintian reports 1 error and 25 warnings high
Lintian reports 1 error and 25 warnings about this package. You should make the package lintian clean getting rid of them.
Created: 2021-10-13 Last update: 2023-02-17 23:01
version in VCS is newer than in repository, is it time to upload? normal
vcswatch reports that this package seems to have a new changelog entry (version 1.3.1-2, distribution UNRELEASED) and new commits in its VCS. You should consider whether it's time to make an upload.

Here are the relevant commit messages:
commit b3b931a9469e082e7050efa7815f9dc9911d4240
Author: Andreas Tille <tille@debian.org>
Date:   Tue Sep 14 12:48:59 2021 +0200

    Fix salsa-ci.yml

commit a343f9bfcccfd4bfb4c06eb82873839580931b02
Author: Andreas Tille <tille@debian.org>
Date:   Tue Sep 14 12:20:41 2021 +0200

    Disable reprotest

commit 007f66cf2c34c1d96ad3947b8f3cb2efda9af668
Author: Andreas Tille <tille@debian.org>
Date:   Tue Sep 14 08:12:24 2021 +0200

    Exclude i386 build in salsa-ci
Created: 2021-03-07 Last update: 2023-05-14 14:02
debian/patches: 7 patches to forward upstream low

Among the 8 debian patches available in version 1.3.1-1 of the package, we noticed the following issues:

  • 7 patches where the metadata indicates that the patch has not yet been forwarded upstream. You should either forward the patch upstream or update the metadata to document its real status.
Created: 2023-02-26 Last update: 2023-02-26 15:54
Standards version of the package is outdated. wishlist
The package should be updated to follow the last version of Debian Policy (Standards-Version 4.6.2 instead of 4.6.0).
Created: 2022-05-11 Last update: 2022-12-17 19:18
news
[rss feed]
  • [2021-09-27] bowtie 1.3.1-1 MIGRATED to testing (Debian testing watch)
  • [2021-09-22] Accepted bowtie 1.3.1-1 (source) into unstable (Andreas Tille)
  • [2020-10-18] bowtie 1.3.0+dfsg1-1 MIGRATED to testing (Debian testing watch)
  • [2020-10-13] Accepted bowtie 1.3.0+dfsg1-1 (source) into unstable (Andreas Tille)
  • [2020-10-12] Accepted bowtie 1.3.0+dfsg-3 (source) into unstable (Andreas Tille)
  • [2020-10-12] Accepted bowtie 1.3.0+dfsg-2 (source) into unstable (Andreas Tille)
  • [2020-09-15] Accepted bowtie 1.3.0+dfsg-1 (source) into unstable (Andreas Tille)
  • [2020-01-15] bowtie 1.2.3+dfsg-4 MIGRATED to testing (Debian testing watch)
  • [2020-01-11] Accepted bowtie 1.2.3+dfsg-4 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
  • [2020-01-08] Accepted bowtie 1.2.3+dfsg-3 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
  • [2019-09-08] bowtie 1.2.3+dfsg-2 MIGRATED to testing (Debian testing watch)
  • [2019-09-05] Accepted bowtie 1.2.3+dfsg-2 (source) into unstable (Alexandre Mestiashvili)
  • [2019-07-14] bowtie 1.2.3+dfsg-1 MIGRATED to testing (Debian testing watch)
  • [2019-07-11] Accepted bowtie 1.2.3+dfsg-1 (source) into unstable (Alexandre Mestiashvili)
  • [2018-09-08] bowtie 1.2.2+dfsg-4 MIGRATED to testing (Debian testing watch)
  • [2018-09-05] Accepted bowtie 1.2.2+dfsg-4 (source amd64 all) into unstable (Alexandre Mestiashvili)
  • [2018-05-26] bowtie 1.2.2+dfsg-3 MIGRATED to testing (Debian testing watch)
  • [2018-05-23] Accepted bowtie 1.2.2+dfsg-3 (source) into unstable (Andreas Tille)
  • [2018-02-06] bowtie 1.2.2+dfsg-2 MIGRATED to testing (Debian testing watch)
  • [2018-01-31] Accepted bowtie 1.2.2+dfsg-2 (source amd64 all) into unstable (Alexandre Mestiashvili)
  • [2017-12-24] bowtie 1.2.2+dfsg-1 MIGRATED to testing (Debian testing watch)
  • [2017-12-18] Accepted bowtie 1.2.2+dfsg-1 (source) into unstable (Alexandre Mestiashvili) (signed by: Andreas Tille)
  • [2017-10-29] bowtie 1.2.1.1+dfsg-1 MIGRATED to testing (Debian testing watch)
  • [2017-10-24] Accepted bowtie 1.2.1.1+dfsg-1 (source) into unstable (Alexandre Mestiashvili) (signed by: Andreas Tille)
  • [2017-06-08] Accepted bowtie 1.2.0+dfsg-1 (source amd64 all) into unstable (Stephan Struckmann) (signed by: Steffen Moeller)
  • [2016-10-20] bowtie 1.1.2-6 MIGRATED to testing (Debian testing watch)
  • [2016-10-14] Accepted bowtie 1.1.2-6 (source) into unstable (Andreas Tille)
  • [2016-09-13] bowtie 1.1.2-5 MIGRATED to testing (Debian testing watch)
  • [2016-09-07] Accepted bowtie 1.1.2-5 (source amd64 all) into unstable (Sascha Steinbiss)
  • [2016-06-01] bowtie 1.1.2-4 MIGRATED to testing (Debian testing watch)
  • 1
  • 2
bugs [bug history graph]
  • all: 0
links
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  • version: 1.3.1-1

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