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bwa-mem2

Sequence alignment using Burrows-Wheeler Transform

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general
  • source: bwa-mem2 (main)
  • version: 2.2.1-1
  • maintainer: Debian Med Packaging Team (archive) (DMD) (LowNMU)
  • uploaders: Dylan Aïssi [DMD] – Michael R. Crusoe [DMD]
  • arch: any
  • std-ver: 4.6.0
  • VCS: Git (Browse, QA)
versions [more versions can be listed by madison] [old versions available from snapshot.debian.org]
[pool directory]
  • unstable: 2.2.1-1
versioned links
  • 2.2.1-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
binaries
  • bwa-mem2
action needed
Problems while searching for a new upstream version high
uscan had problems while searching for a new upstream version:
In debian/watch no matching files for watch line
  https://github.com/bwa-mem2/bwa-mem2/releases .*/download/v(?:[-_]?[Vv]?(\d[\-+\.:\~\da-zA-Z]*))/Source_code_including_submodules(?i)(?:\.(?:tar\.xz|tar\.bz2|tar\.gz|tar\.zstd?|zip|tgz|tbz|txz))
Created: 2025-04-18 Last update: 2025-07-20 10:32
The package has not entered testing even though the delay is over normal
The package has not entered testing even though the 20-day delay is over. Check why.
Created: 2025-04-27 Last update: 2025-07-20 16:02
lintian reports 16 warnings normal
Lintian reports 16 warnings about this package. You should make the package lintian clean getting rid of them.
Created: 2025-04-17 Last update: 2025-04-17 21:00
debian/patches: 1 patch to forward upstream low

Among the 10 debian patches available in version 2.2.1-1 of the package, we noticed the following issues:

  • 1 patch where the metadata indicates that the patch has not yet been forwarded upstream. You should either forward the patch upstream or update the metadata to document its real status.
Created: 2025-04-17 Last update: 2025-04-17 22:03
Standards version of the package is outdated. wishlist
The package should be updated to follow the last version of Debian Policy (Standards-Version 4.7.2 instead of 4.6.0).
Created: 2025-04-17 Last update: 2025-04-17 19:03
testing migrations
  • excuses:
    • Migration status for bwa-mem2 (- to 2.2.1-1): BLOCKED: Needs an approval (either due to a freeze, the source suite or a manual hint)
    • Issues preventing migration:
    • ∙ ∙ blocked by freeze: is not in testing
    • Additional info:
    • ∙ ∙ Piuparts tested OK - https://piuparts.debian.org/sid/source/b/bwa-mem2.html
    • ∙ ∙ autopkgtest for bwa-mem2/2.2.1-1: amd64: Pass, i386: Pass
    • ∙ ∙ Reproducible on amd64 - info ♻
    • ∙ ∙ Waiting for reproducibility test results on armhf - info ♻
    • ∙ ∙ 94 days old (needed 20 days)
    • Not considered
news
[rss feed]
  • [2025-04-17] Accepted bwa-mem2 2.2.1-1 (source amd64) into unstable (Debian FTP Masters) (signed by: Michael R. Crusoe)
bugs [bug history graph]
  • all: 0
links
  • homepage
  • lintian (0, 16)
  • buildd: logs, cross
  • popcon
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  • screenshots
  • debian patches
  • debci
ubuntu Ubuntu logo [Information about Ubuntu for Debian Developers]
  • version: 2.2.1-1

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