vcswatch reports that
this package seems to have a new changelog entry (version
3.5.2, distribution
UNRELEASED) and new commits
in its VCS. You should consider whether it's time to make
an upload.
Here are the relevant commit messages:
commit 77893f0bdc8726a04c0248d79b5a31302b09a5e7
Author: Andreas Tille <tille@debian.org>
Date: Sat Jul 4 08:27:09 2020 +0200
Add mecat2 and rosa
commit 9b3d8d76ea5524ad39648741b8a58f0ad4a88a88
Author: Andreas Tille <tille@debian.org>
Date: Thu Jul 2 22:54:23 2020 +0200
Recommends: marginphase
commit 0d359a6cd4d5434a1c37955581a32938b67bccef
Author: Andreas Tille <tille@debian.org>
Date: Tue Jun 30 11:39:15 2020 +0200
Recommends: libssu-dev, python3-unifrac
commit 1f79bc1e0b6cb0f27d7c914f7db6a346d57fdcba
Author: Andreas Tille <tille@debian.org>
Date: Tue Jun 30 07:34:31 2020 +0200
Add dextractor
commit ff0b95db9cab73dd431cafc319c2891576450c2d
Author: Andreas Tille <tille@debian.org>
Date: Mon Jun 29 11:01:01 2020 +0200
Update UDD
commit dfcf44928f3e416bebc9ac784d06267a4d2dc89c
Author: Andreas Tille <tille@debian.org>
Date: Mon Jun 29 08:22:24 2020 +0200
Add trf
commit c192f675b4986f0f04649b77f7446819fd29de73
Author: Andreas Tille <tille@debian.org>
Date: Sat Jun 27 08:53:14 2020 +0200
Add seqkit
commit af1b5ba63daff30431279b871f5d872aa9f882cb
Author: Andreas Tille <tille@debian.org>
Date: Fri Jun 26 10:55:49 2020 +0200
treetime is packaged
commit 5d9b02cf7621cefcd107de5ee2c8ff905541ff8b
Author: Andreas Tille <tille@debian.org>
Date: Fri Jun 26 10:52:26 2020 +0200
Update UDD status
commit 692d565fd0df6bfcd631edbfb12b6abb16507fd9
Author: Andreas Tille <tille@debian.org>
Date: Wed Jun 24 18:37:21 2020 +0200
Revert "Update bio - substituted (most) recommendations with suggestions" - this heavy change should be discussed first. Please use the extra branch.
This reverts commit d272989338037be9ff8eb691a1ed8b8a2216c42d.
commit d272989338037be9ff8eb691a1ed8b8a2216c42d
Author: Steffen Möller <moeller@debian.org>
Date: Tue Jun 23 16:56:33 2020 +0000
Update bio - substituted (most) recommendations with suggestions
commit 15699646484a1558a9abcfc69ca4b15295a4f2ce
Author: Steffen Möller <moeller@debian.org>
Date: Tue Jun 23 16:43:27 2020 +0000
Update bio-dev - added conda-package-handling
commit dddd8ce3f22c38f3073aa817e4acc4fe28e98563
Author: Steffen Möller <moeller@debian.org>
Date: Tue Jun 23 16:42:51 2020 +0000
Update bio - added conda-package-handling
commit ed1e144359426d8bf4da58b50cc808eb97176577
Author: Andreas Tille <tille@debian.org>
Date: Mon Jun 22 23:23:26 2020 +0200
Recommends: pomoxis
commit 0baf2c170a92b267462996bf57ea737cd5709835
Author: Andreas Tille <tille@debian.org>
Date: Mon Jun 22 14:55:11 2020 +0200
Update UDD
commit 5c362fa523e3d80f9210d3245c8e3e663f5cf17a
Author: Andreas Tille <tille@debian.org>
Date: Mon Jun 22 14:52:54 2020 +0200
Add medaka
commit e7ca7bd779696125f8a1773d53251f20c3361fe7
Author: Andreas Tille <tille@debian.org>
Date: Mon Jun 22 14:51:30 2020 +0200
Cleanup some remarks
commit 8d564eb31555007ee353d00ff09b3f11f4ec5ea1
Author: Andreas Tille <tille@debian.org>
Date: Sun Jun 21 23:07:11 2020 +0200
Streamz is python3-streamz
commit ae4c7d375f349d6b8b1dd7568014d6d86f602bb4
Author: Steffen Möller <moeller@debian.org>
Date: Sun Jun 21 16:43:10 2020 +0000
Update bio - added entries from new queue
commit 82fef035750880267dd6de6734c3dc4971a17dde
Author: Steffen Möller <moeller@debian.org>
Date: Sun Jun 21 16:06:35 2020 +0000
Update bio
commit a9e8c13b17938706c0036fd78a4dfe776b21ac51
Author: Andreas Tille <tille@debian.org>
Date: Sun Jun 21 16:08:13 2020 +0200
Recommends: ufasta
commit d8c35b406bf153b8526d69ca0582823ab210b6fc
Author: Andreas Tille <tille@debian.org>
Date: Sun Jun 21 14:18:25 2020 +0200
Update UDD
commit b53ad025ca39f6e3093630b1e065cf391b024a04
Author: Andreas Tille <tille@debian.org>
Date: Sat Jun 20 16:33:41 2020 +0200
Revert "Update bio - recommends->suggests and added ref to Rsubread (BioConductor)" - the attempt should be finalised in branch demote-recommends first
This reverts commit 6f89da845718a91efc641291f65d0c3480750b07.
commit b949d091360a8ae1c25e6bbde597345aa85aa738
Author: Andreas Tille <tille@debian.org>
Date: Sat Jun 20 11:20:51 2020 +0200
Update UDD status
commit 3f6450f7f79a8940b76deace116b5eca7f29bc43
Author: Andreas Tille <tille@debian.org>
Date: Fri Jun 19 09:09:14 2020 +0200
Update UDD status
commit 396ff696b67465b30bd88c1c603f9ebade651cad
Author: Andreas Tille <tille@debian.org>
Date: Thu Jun 18 17:49:31 2020 +0200
pychopper is python3-pychopper
commit 76bb459bc93f1f926c0d354c02026d4f75e53df4
Author: Andreas Tille <tille@debian.org>
Date: Thu Jun 18 14:53:19 2020 +0200
magicblast is ncbi-magicblast
commit 24fea3f217ec8019b946704384ada000d10ea2cf
Author: Andreas Tille <tille@debian.org>
Date: Thu Jun 18 14:18:08 2020 +0200
pairtools is python3-pairtools
commit 2e34868fa7dd0583102bbfc04b7fe949d27863b5
Author: Andreas Tille <tille@debian.org>
Date: Thu Jun 18 13:09:59 2020 +0200
Recommends: ngmlr
commit 326fa4dbf58d89f267e89eb30679b0a0ad91bdc4
Author: Andreas Tille <tille@debian.org>
Date: Thu Jun 18 12:00:09 2020 +0200
Add python3-intake which was missing in this list
commit 8403ceeda4ad8085800fc1b10be5ef278130e9cb
Author: Andreas Tille <tille@debian.org>
Date: Thu Jun 18 10:09:54 2020 +0200
Recommends: vn
commit 2adc792b9b9573e5d6dc8c06701fa397032de419
Author: Andreas Tille <tille@debian.org>
Date: Wed Jun 17 20:54:13 2020 +0200
Recommends: python3-pyranges
commit 3c9e20d8bb55546beed90efefdcedf819687486f
Author: Andreas Tille <tille@debian.org>
Date: Wed Jun 17 20:50:18 2020 +0200
Update UDD data
commit 64e81890db090bf53c126da45d4e552184ec5698
Author: Andreas Tille <tille@debian.org>
Date: Wed Jun 17 18:37:51 2020 +0200
Recommends: yanagiba
commit 816d84408825fd255ae23509f6f4202dddea9c82
Author: Andreas Tille <tille@debian.org>
Date: Wed Jun 17 12:28:02 2020 +0200
Add python3-seirsplus
commit 59918ead544a88748f0494659ab8e72c915df10b
Author: Andreas Tille <tille@debian.org>
Date: Wed Jun 17 10:19:10 2020 +0200
Synced with https://docs.google.com/spreadsheets/d/1tApLhVqxRZ2VOuMH_aPUgFENQJfbLlB_PFH_Ah_q7hM/edit?ts=5eb957ba#gid=543782716, update UDD
commit b9703b20c5919b0e66666bca99ab3b45d5535e4e
Author: Andreas Tille <tille@debian.org>
Date: Wed Jun 17 09:47:12 2020 +0200
Fix query to avoid duplicates and update to latest status of UDD
commit e744c43bb769cf075df6cf47ffcb3008bb05bb38
Author: Andreas Tille <tille@debian.org>
Date: Wed Jun 17 08:08:04 2020 +0200
Add nanofilt
commit 30ae50d931cf1086bdc0e2a997c0b496a825b32f
Author: Andreas Tille <tille@debian.org>
Date: Tue Jun 16 19:48:07 2020 +0200
Add new packages
commit 407c6e7587a18c9fd7be6f4ed69a26b2786ce563
Author: Andreas Tille <tille@debian.org>
Date: Mon Jun 15 18:53:25 2020 +0200
Recommends: readucks
commit d9312b8b1c1177327a57ac3403d66f03a8330779
Author: Andreas Tille <tille@debian.org>
Date: Mon Jun 15 12:37:02 2020 +0200
Add tombo and lastz
commit fbd5bef65cc272c6bd01dac82f65d5cea328b6f4
Author: Andreas Tille <tille@debian.org>
Date: Mon Jun 15 11:46:46 2020 +0200
Add Recommends: signalalign
commit ff62526054bb0f6408a23988271727e2ac6e2cd5
Author: Andreas Tille <tille@debian.org>
Date: Mon Jun 15 09:10:00 2020 +0200
Several packages now moved to testing
commit 94dcb59088e5859bacddf78c68e0e7cde94bdab5
Author: Andreas Tille <tille@debian.org>
Date: Sun Jun 14 00:04:46 2020 +0200
Add python3-pairix
commit 54a5cb071b0aa0fe4e1d346a6dcf9ca64ef168c9
Author: Steffen Möller <moeller@debian.org>
Date: Sat Jun 13 16:16:27 2020 +0000
Update bio-dev - added ncls
commit 9be13a52c3f7293d52e264e49c38ed2d6b1b9f64
Author: Steffen Möller <moeller@debian.org>
Date: Sat Jun 13 16:15:05 2020 +0000
Update bio - added ncls
commit 877c16d7bde0e86c9dab6c0e305805c761675dbf
Author: Andreas Tille <tille@debian.org>
Date: Sat Jun 13 17:03:37 2020 +0200
Recommends: python3-cooler
commit c38004bb033f35ba0757589020eeaf0ea0619686
Author: Andreas Tille <tille@debian.org>
Date: Fri Jun 12 23:49:38 2020 +0200
Some packages accepted
commit 9c4ebd18a54a95875a50dffce8bcfafe9a4bf6be
Author: Steffen Möller <moeller@debian.org>
Date: Fri Jun 12 19:03:36 2020 +0000
Update covid-19 - added TODO mmtf python package
commit 958c2f716e65824a668b808daa56151549276fbd
Author: Steffen Möller <moeller@debian.org>
Date: Thu Jun 11 13:12:18 2020 +0000
Update bio - added r-bioc-grohmm, removed doublette r-bioc-tximport
commit 6f89da845718a91efc641291f65d0c3480750b07
Author: Steffen Möller <moeller@debian.org>
Date: Thu Jun 11 12:16:49 2020 +0000
Update bio - recommends->suggests and added ref to Rsubread (BioConductor)
There are far too many recommended packages for a general "bio" metapackage. This needs to be cleaned up.
commit 14546540cc0aa166c1062338a369af88a1344515
Author: Steffen Möller <moeller@debian.org>
Date: Thu Jun 11 12:05:27 2020 +0000
Update bio-ngs - added ref to Rsubread (BioConductor)
commit f5810bf20cb9867b90e2bb0550381debac0dbcd2
Author: Steffen Möller <moeller@debian.org>
Date: Thu Jun 11 12:04:29 2020 +0000
Update covid-19 - added ref to Rsubread (BioConductor)
commit d673ca86a3d79b09fb635ddbaa8b48c79d1d3d3e
Author: Andreas Tille <tille@debian.org>
Date: Wed Jun 10 21:49:48 2020 +0200
Add ncbi-acc-download and insilicoseq
commit 10863d430113eeaa3e796d30b869da6d7f29a5fb
Author: Andreas Tille <tille@debian.org>
Date: Wed Jun 10 12:50:49 2020 +0200
Some more packages in new
commit 18b61ff4beab6ae328479338287c952f074c44b7
Author: Andreas Tille <tille@debian.org>
Date: Tue Jun 9 18:47:14 2020 +0200
Recommends: assembly-stats
commit 38e04a5a696fd1bf726a8fe4309ca38a3331db53
Author: Andreas Tille <tille@debian.org>
Date: Tue Jun 9 17:52:00 2020 +0200
Update status UDD
commit 9f36fb4458762e3b4bfff2696c039eb06dc9afe0
Author: Steffen Möller <moeller@debian.org>
Date: Mon Jun 8 22:23:36 2020 +0000
Update bio - added tophat and tophat-recondition
commit 373814bb72b8bc9e6c8f9770073f7fee672830a0
Author: Steffen Möller <moeller@debian.org>
Date: Mon Jun 8 15:25:00 2020 +0000
Update bio - added qiime2 modules not yet in distribution
commit afb80161d9ef2083d26658f875eacd40be6beb99
Author: Steffen Möller <moeller@debian.org>
Date: Mon Jun 8 14:58:57 2020 +0000
Update bio - added qiime modules
commit 00bfcb2214be10da09086fd53ee3596b6f768025
Author: Andreas Tille <tille@debian.org>
Date: Mon Jun 8 14:27:11 2020 +0200
Fix typo also in task
commit 45e1dadbdc9196bef3c25d7190f585d1edf77918
Author: Andreas Tille <tille@debian.org>
Date: Mon Jun 8 14:26:22 2020 +0200
Typo in vienna-rna
commit 666d5591c1038323ccb9de156eb3faf2194082d4
Author: Andreas Tille <tille@debian.org>
Date: Mon Jun 8 13:50:24 2020 +0200
Update udd
commit 97aaf8c3f5814ce4d606f43e21a427b78fef3ea3
Author: Andreas Tille <tille@debian.org>
Date: Sun Jun 7 20:34:22 2020 +0200
Add flappie and nanosv
commit c71441afaec9129c6298257ba97dd5345eb8601b
Author: Andreas Tille <tille@debian.org>
Date: Sun Jun 7 20:30:47 2020 +0200
Update UDD
commit 40b6c7e034a830232e5a6f156dac5d8a0f3da110
Author: Andreas Tille <tille@debian.org>
Date: Sun Jun 7 09:01:55 2020 +0200
Inject more packages mentioned in Jun's document
commit f3dca1abdd2f7613bf523a0dea9640c6ec2d0698
Author: Steffen Möller <moeller@debian.org>
Date: Sun Jun 7 14:26:10 2020 +0000
Update bio - added nanosv
commit 0dd4c2c6aa40f7639c320edd72ee17a1bfa40bb8
Author: Steffen Möller <moeller@debian.org>
Date: Sun Jun 7 14:21:07 2020 +0000
Update bio - added flappie
commit 47bbec8032396ba8cec1a321bfa09de0c61b980a
Author: Steffen Möller <moeller@debian.org>
Date: Sun Jun 7 01:39:54 2020 +0000
Update bio - added picopore
commit 84b7dfeb2cc4b1c2b1f47dea1d04237031ca19b0
Author: Andreas Tille <tille@debian.org>
Date: Sat Jun 6 07:19:07 2020 +0200
Keep the sequence of packages identical to original table at https://docs.google.com/spreadsheets/d/1tApLhVqxRZ2VOuMH_aPUgFENQJfbLlB_PFH_Ah_q7hM/edit?ts=5eb957ba#gid=543782716
commit 6db731f0f74cbe851b59b93962c4999bbbbc758e
Author: Andreas Tille <tille@debian.org>
Date: Fri Jun 5 18:49:40 2020 +0200
Recommends: flye
commit dc2cabbcba5935f33ce6c8337d9ecbd3a78c05aa
Author: Andreas Tille <tille@debian.org>
Date: Fri Jun 5 11:20:57 2020 +0200
libatomicbitvector-dev is in new
commit 66c0e63af9c5652b5bc6a007cd97e6ee5136b008
Author: Andreas Tille <tille@debian.org>
Date: Thu Jun 4 21:45:35 2020 +0200
argparser does not make any sense in this list
commit 7f701a7887668ca02be45e41b594adda487551d8
Author: Andreas Tille <tille@debian.org>
Date: Thu Jun 4 21:04:54 2020 +0200
Add links to software mentioned in paper at https://www.preprints.org/manuscript/202005.0376/v1
commit 1b90e619917d5a800b78c0562dff6d075e8c3b9c
Author: Andreas Tille <tille@debian.org>
Date: Thu Jun 4 14:43:31 2020 +0200
args is libargs, added vt, update UDD
commit c6f8ef308a6a9422e1dd90f0238ffb5b42ec8c8b
Author: Andreas Tille <tille@debian.org>
Date: Thu Jun 4 09:18:16 2020 +0200
Update bio_covid-19 list, added libbbhash-dev
commit db68db33a8b349972af5903290a76c47a1b246d9
Author: Steffen Möller <moeller@debian.org>
Date: Wed Jun 3 14:14:34 2020 +0000
Update bio - added graphmap2
commit 2a7d1d7ab7f8782d4ec1ec4314446b73bcb8bf63
Author: Steffen Möller <moeller@debian.org>
Date: Wed Jun 3 14:13:47 2020 +0000
Update bio-ngs - added graphmap2
commit dd7c9d6fdf6999c7cc48055b5142ded797b0e334
Author: Steffen Möller <moeller@debian.org>
Date: Wed Jun 3 14:08:41 2020 +0000
Update bio-ngs - added nanolyse, nanoplot
commit 4b1327b9d0c99522bbf7f34bff48323cac4ffd27
Author: Steffen Möller <moeller@debian.org>
Date: Wed Jun 3 14:07:49 2020 +0000
Update bio - added nanolyse, nanoplot
commit d2475f21a266af44ea20c0da139aefeeb9fd1b30
Author: Andreas Tille <tille@debian.org>
Date: Wed Jun 3 15:51:45 2020 +0200
Add bbhash, update packages
commit e2f554cc84cfc7665e1cf4c28efe0cb6d04991ef
Author: Andreas Tille <tille@debian.org>
Date: Mon Jun 1 15:56:16 2020 +0200
Migrations to testing, upload to new
commit d20f3736e6811725c6e7802f630e0c31b0b012d5
Author: Andreas Tille <tille@debian.org>
Date: Sat May 30 21:32:26 2020 +0200
Add covtobed
commit 3592d3b07208af99e7991eaf9fd00baba7759ead
Author: Andreas Tille <tille@debian.org>
Date: Sat May 30 10:01:58 2020 +0200
Update dependencies
commit 6b998125cb9e58f5c446635b4699285562f04953
Author: Andreas Tille <tille@debian.org>
Date: Sat May 30 09:57:22 2020 +0200
Just uploaded plain presto package to (binary) new
commit 8e416f5695b1be48b07b8e66d78285c7c9dfa098
Author: Andreas Tille <tille@debian.org>
Date: Fri May 29 15:20:26 2020 +0200
Typo
commit e31cb10b3f1ab2456d6f27009d7ecff767161ded
Author: Andreas Tille <tille@debian.org>
Date: Fri May 29 12:54:10 2020 +0200
Recommends: r-cran-incidence, r-cran-epiestim
commit 7f76e74fb9d3523539842fe45aa9a9c36f44ce5d
Author: Andreas Tille <tille@debian.org>
Date: Thu May 28 17:46:15 2020 +0200
Metabat now in Salsa
commit 048b03d9814129d2a5dda8838d33890d4c316a63
Author: Andreas Tille <tille@debian.org>
Date: Thu May 28 16:35:40 2020 +0200
Update list
commit bee99e99e1cdda283afc6b91ee7f1685ffbfc2c2
Author: Andreas Tille <tille@debian.org>
Date: Thu May 28 10:39:07 2020 +0200
vep is ensembl-vep
commit 61c7257337b27b3e41bfb1f86a61a2722c80e57a
Author: Andreas Tille <tille@debian.org>
Date: Thu May 28 09:06:23 2020 +0200
Add column test suite
commit 294f89dbc20eb282e2e3f54190a66b36a098b695
Author: Andreas Tille <tille@debian.org>
Date: Wed May 27 23:07:28 2020 +0200
lumpy is lumpy-sv, new push in UDD uncovered more accepted packages and packages in new
commit 317a1e82a228a00ab4dfc517014704a9c1225e25
Author: Andreas Tille <tille@debian.org>
Date: Wed May 27 22:40:59 2020 +0200
Re-render dependencies with some accepted packages and other packages in new
commit 1fbecdba835feeaa1c4dc7fa5baa715e5862c601
Author: Andreas Tille <tille@debian.org>
Date: Wed May 27 16:39:49 2020 +0200
Recommends: lighter
commit f449e24fe8add6cd61cef1ed0faf9457a46b968a
Author: Andreas Tille <tille@debian.org>
Date: Wed May 27 13:52:13 2020 +0200
Recommends: samclip
commit b917aade8725d6183985abac75099f71c2580b1a
Author: Andreas Tille <tille@debian.org>
Date: Wed May 27 08:09:43 2020 +0200
Some package migrations, more conda ids
commit b1ac82f4b7df98d957ab2587a0ed9af71c57ec4e
Author: Andreas Tille <tille@debian.org>
Date: Tue May 26 15:57:08 2020 +0200
Add lumpy-sv
commit fe04995eeaf955f56542434bfeb76ff051f9a4ed
Author: Andreas Tille <tille@debian.org>
Date: Tue May 26 15:03:29 2020 +0200
Updated list of packages according to https://docs.google.com/spreadsheets/d/1tApLhVqxRZ2VOuMH_aPUgFENQJfbLlB_PFH_Ah_q7hM/edit?ts=5eb957ba#gid=543782716
commit 685d9fbb2930d68bd9aaff52eedec85f79ad1bbd
Author: Andreas Tille <tille@debian.org>
Date: Tue May 26 13:45:28 2020 +0200
python3-h5py was added to https://docs.google.com/spreadsheets/d/1tApLhVqxRZ2VOuMH_aPUgFENQJfbLlB_PFH_Ah_q7hM/edit?ts=5eb957ba#gid=543782716
commit e9fcb6dbfb3cf5a63d542c2ae16e47fbe04446d5
Author: Andreas Tille <tille@debian.org>
Date: Tue May 26 13:00:17 2020 +0200
Recommends: flash
![[bug history graph]](https://qa.debian.org/data/bts/graphs/d/debian-med.png){kind=link}