hdf5 - Debian Package Tracker

general

source: hdf5 (main)
version: 1.10.8+repack-3
maintainer: Gilles Filippini (DMD)
arch: all any
std-ver: 4.5.0
VCS: Git (Browse, QA)

versions [more versions can be listed by madison] [old versions available from snapshot.debian.org]

[pool directory]

o-o-stable: 1.10.0-patch1+docs-3+deb9u1
oldstable: 1.10.4+repack-10
stable: 1.10.6+repack-4+deb11u1
testing: 1.10.8+repack-1
unstable: 1.10.8+repack-3
exp: 1.12.2+repack-1~exp1

versioned links

1.10.0-patch1+docs-3+deb9u1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
1.10.4+repack-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
1.10.4+repack-10: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
1.10.6+repack-4+deb11u1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
1.10.8+repack-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
1.10.8+repack-4: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
1.12.2+repack-1~exp1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]

binaries

hdf5-helpers
hdf5-tools (5 bugs: 0, 5, 0, 0)
libhdf5-103
libhdf5-103-1
libhdf5-cpp-103
libhdf5-cpp-103-1
libhdf5-dev (1 bugs: 0, 1, 0, 0)
libhdf5-doc
libhdf5-fortran-102
libhdf5-hl-100
libhdf5-hl-cpp-100
libhdf5-hl-fortran-100
libhdf5-java
libhdf5-jni
libhdf5-mpi-dev
libhdf5-mpich-103
libhdf5-mpich-103-1
libhdf5-mpich-cpp-103-1
libhdf5-mpich-dev
libhdf5-mpich-fortran-102
libhdf5-mpich-hl-100
libhdf5-mpich-hl-cpp-100
libhdf5-mpich-hl-fortran-100
libhdf5-openmpi-103
libhdf5-openmpi-103-1
libhdf5-openmpi-cpp-103-1
libhdf5-openmpi-dev (2 bugs: 0, 2, 0, 0)
libhdf5-openmpi-fortran-102
libhdf5-openmpi-hl-100
libhdf5-openmpi-hl-cpp-100
libhdf5-openmpi-hl-fortran-100

action needed

3 security issues in sid high

There are 3 open security issues in sid.

3 important issues:

CVE-2019-8396: A buffer overflow in H5O__layout_encode in H5Olayout.c in the HDF HDF5 through 1.10.4 library allows attackers to cause a denial of service via a crafted HDF5 file. This issue was triggered while repacking an HDF5 file, aka "Invalid write of size 2."
CVE-2019-8398: An issue was discovered in the HDF HDF5 1.10.4 library. There is an out of bounds read in the function H5T_get_size in H5T.c.
CVE-2018-11205: A out of bounds read was discovered in H5VM_memcpyvv in H5VM.c in the HDF HDF5 1.10.2 library. It could allow a remote denial of service or information disclosure attack.

Created: 2022-07-04 Last update: 2022-11-26 16:07

8 security issues in buster high

There are 8 open security issues in buster.

3 important issues:

CVE-2019-8396: A buffer overflow in H5O__layout_encode in H5Olayout.c in the HDF HDF5 through 1.10.4 library allows attackers to cause a denial of service via a crafted HDF5 file. This issue was triggered while repacking an HDF5 file, aka "Invalid write of size 2."
CVE-2019-8398: An issue was discovered in the HDF HDF5 1.10.4 library. There is an out of bounds read in the function H5T_get_size in H5T.c.
CVE-2018-11205: A out of bounds read was discovered in H5VM_memcpyvv in H5VM.c in the HDF HDF5 1.10.2 library. It could allow a remote denial of service or information disclosure attack.

5 issues postponed or untriaged:

CVE-2018-17233: (needs triaging) A SIGFPE signal is raised in the function H5D__create_chunk_file_map_hyper() of H5Dchunk.c in the HDF HDF5 through 1.10.3 library during an attempted parse of a crafted HDF file, because of incorrect protection against division by zero. It could allow a remote denial of service attack.
CVE-2018-17234: (needs triaging) Memory leak in the H5O__chunk_deserialize() function in H5Ocache.c in the HDF HDF5 through 1.10.3 library allows attackers to cause a denial of service (memory consumption) via a crafted HDF5 file.
CVE-2018-17237: (needs triaging) A SIGFPE signal is raised in the function H5D__chunk_set_info_real() of H5Dchunk.c in the HDF HDF5 1.10.3 library during an attempted parse of a crafted HDF file, because of incorrect protection against division by zero. This issue is different from CVE-2018-11207.
CVE-2018-17434: (needs triaging) A SIGFPE signal is raised in the function apply_filters() of h5repack_filters.c in the HDF HDF5 through 1.10.3 library during an attempted parse of a crafted HDF file, because of incorrect protection against division by zero. It could allow a remote denial of service attack.
CVE-2018-17437: (needs triaging) Memory leak in the H5O_dtype_decode_helper() function in H5Odtype.c in the HDF HDF5 through 1.10.3 library allows attackers to cause a denial of service (memory consumption) via a crafted HDF5 file.

Created: 2022-07-04 Last update: 2022-11-26 16:07

3 security issues in bullseye high

There are 3 open security issues in bullseye.

3 important issues:

CVE-2019-8396: A buffer overflow in H5O__layout_encode in H5Olayout.c in the HDF HDF5 through 1.10.4 library allows attackers to cause a denial of service via a crafted HDF5 file. This issue was triggered while repacking an HDF5 file, aka "Invalid write of size 2."
CVE-2019-8398: An issue was discovered in the HDF HDF5 1.10.4 library. There is an out of bounds read in the function H5T_get_size in H5T.c.
CVE-2018-11205: A out of bounds read was discovered in H5VM_memcpyvv in H5VM.c in the HDF HDF5 1.10.2 library. It could allow a remote denial of service or information disclosure attack.

Created: 2022-07-04 Last update: 2022-11-26 16:07

3 security issues in bookworm high

There are 3 open security issues in bookworm.

3 important issues:

CVE-2019-8396: A buffer overflow in H5O__layout_encode in H5Olayout.c in the HDF HDF5 through 1.10.4 library allows attackers to cause a denial of service via a crafted HDF5 file. This issue was triggered while repacking an HDF5 file, aka "Invalid write of size 2."
CVE-2019-8398: An issue was discovered in the HDF HDF5 1.10.4 library. There is an out of bounds read in the function H5T_get_size in H5T.c.
CVE-2018-11205: A out of bounds read was discovered in H5VM_memcpyvv in H5VM.c in the HDF HDF5 1.10.2 library. It could allow a remote denial of service or information disclosure attack.

Created: 2022-07-04 Last update: 2022-11-26 16:07

Problems while searching for a new upstream version high

uscan had problems while searching for a new upstream version:

uscan warning: In debian/watch,
 no matching refs for watch line
 https://bitbucket.hdfgroup.org/scm/hdffv/hdf5.git refs/tags/hdf5-([\d_]+) debian debian/orig-tar.sh

Created: 2022-05-05 Last update: 2022-11-26 14:39

lintian reports 47 warnings normal

Lintian reports 47 warnings about this package. You should make the package lintian clean getting rid of them.

Created: 2022-11-23 Last update: 2022-11-26 17:02

Multiarch hinter reports 1 issue(s) low

There are issues with the multiarch metadata for this package.

libhdf5-doc could be marked Multi-Arch: foreign

Created: 2016-09-14 Last update: 2022-11-26 19:34

Build log checks report 3 warnings low

Build log checks report 3 warnings

Created: 2021-09-10 Last update: 2021-09-10 08:35

Standards version of the package is outdated. wishlist

The package should be updated to follow the last version of Debian Policy (Standards-Version 4.6.1 instead of 4.5.0).

Created: 2020-11-17 Last update: 2022-11-26 18:58

testing migrations

This package will soon be part of the auto-hdf5 transition. You might want to ensure that your package is ready for it. You can probably find supplementary information in the debian-release archives or in the corresponding release.debian.org bug.
excuses:
- Migration status for hdf5 (1.10.8+repack-1 to 1.10.8+repack-4): BLOCKED: Maybe temporary, maybe blocked but Britney is missing information (check below)
- Issues preventing migration:
- ∙ ∙ missing build on mips64el
- ∙ ∙ autopkgtest for adios/1.13.1-30: amd64: Pass, arm64: Pass, armel: Pass, armhf: Pass, i386: Pass, ppc64el: Test in progress, s390x: Pass
- ∙ ∙ autopkgtest for avogadrolibs/1.97.0-3: amd64: Pass, arm64: Pass, armel: Pass, armhf: Pass, i386: Pass, ppc64el: Test in progress, s390x: Pass
- ∙ ∙ autopkgtest for bcalm/2.2.3-3: amd64: Pass, arm64: Pass, i386: Pass, ppc64el: Test in progress, s390x: Pass
- ∙ ∙ autopkgtest for blasr/5.3.5+dfsg-5: amd64: Pass, arm64: Pass, ppc64el: Test in progress
- ∙ ∙ autopkgtest for cctbx/2022.9+ds2+~3.11.2+ds1-4: amd64: Pass, arm64: Pass, ppc64el: Test in progress, s390x: Pass
- ∙ ∙ autopkgtest for cdo/2.1.0-1: amd64: No test results, arm64: No test results, armel: No test results, armhf: No test results, i386: No test results, ppc64el: Test in progress, s390x: No test results
- ∙ ∙ autopkgtest for chemps2/1.8.12-1: amd64: Pass, arm64: Pass, armel: Pass, armhf: Pass, i386: Pass, ppc64el: Test in progress, s390x: Pass
- ∙ ∙ autopkgtest for csound-plugins/1.0.2~dfsg1-2: amd64: Pass, arm64: Pass, armel: Pass, armhf: Pass, i386: Pass, ppc64el: Test in progress, s390x: Pass
- ∙ ∙ autopkgtest for deal.ii/9.4.0-2: amd64: Pass, arm64: Pass, ppc64el: Test in progress, s390x: Pass
- ∙ ∙ autopkgtest for diffoscope/225: amd64: Pass, arm64: Pass, armel: Pass, armhf: Pass, i386: Pass, ppc64el: Test in progress, s390x: Pass
- ∙ ∙ autopkgtest for discosnp/1:2.6.2-1: amd64: Pass, arm64: Pass, i386: Pass, ppc64el: Test in progress, s390x: Not a regression
- ∙ ∙ autopkgtest for dmrgpp/6.02-3: amd64: Pass, arm64: Pass, armhf: No test results, i386: Test in progress, ppc64el: Test in progress, s390x: No test results
- ∙ ∙ autopkgtest for dyssol/1.0.2+ds2-1: amd64: Pass, arm64: Pass, armel: Pass, armhf: Pass, i386: Pass, ppc64el: Test in progress, s390x: Pass
- ∙ ∙ autopkgtest for fast5/0.6.5-7: amd64: Pass, arm64: Pass, armel: Pass, armhf: Pass, i386: Pass, ppc64el: Test in progress, s390x: Pass
- ∙ ∙ autopkgtest for fclib/3.1.0+dfsg-2: amd64: Pass, arm64: Pass, armel: Pass, armhf: Pass, i386: Pass, ppc64el: Test in progress, s390x: Pass
- ∙ ∙ autopkgtest for fenics-dolfinx/1:0.5.2-1: amd64: Pass, arm64: Pass, armel: Pass, armhf: Pass, i386: Test in progress, ppc64el: Test in progress, s390x: Pass
- ∙ ∙ autopkgtest for freefem++/4.11+dfsg1-2: amd64: Not a regression, arm64: Pass, armel: Pass, armhf: Not a regression, i386: Not a regression, ppc64el: Test in progress, s390x: Pass
- ∙ ∙ autopkgtest for h5py/3.7.0-3: amd64: Pass, arm64: Pass, armel: Pass, armhf: Pass, i386: Pass, ppc64el: Test in progress, s390x: Pass
- ∙ ∙ autopkgtest for ismrmrd/1.8.0-2: amd64: Pass, arm64: Pass, armel: Pass, i386: Pass, ppc64el: Test in progress, s390x: Pass
- ∙ ∙ autopkgtest for kineticstools/0.6.1+git20220223.1326a4d+dfsg-1: amd64: Pass, arm64: Pass, armel: Pass, armhf: Pass, i386: Pass, ppc64el: Test in progress, s390x: Not a regression
- ∙ ∙ autopkgtest for libpdl-io-hdf5-perl/1:0.75-4: amd64: Pass, arm64: Pass, armel: Pass, armhf: Pass, i386: Pass, ppc64el: Test in progress, s390x: Pass
- ∙ ∙ autopkgtest for libsis-jhdf5-java/19.04.1+dfsg-2: amd64: Pass, arm64: Pass, armel: Pass, armhf: Pass, i386: Pass, ppc64el: Test in progress
- ∙ ∙ autopkgtest for med-fichier/4.1.0+repack-3: amd64: Pass, arm64: Pass, armel: Pass, armhf: Pass, i386: Pass, ppc64el: Test in progress, s390x: Pass
- ∙ ∙ autopkgtest for minia/3.2.6-2: amd64: Pass, arm64: Pass, i386: Pass, ppc64el: Test in progress, s390x: Pass
- ∙ ∙ autopkgtest for nanook/1.33+dfsg-4: amd64: Pass, arm64: Pass, armel: Pass, armhf: Pass, i386: Pass, ppc64el: Test in progress, s390x: Pass
- ∙ ∙ autopkgtest for nanopolish/0.14.0-1: amd64: Pass, arm64: Pass, armel: Pass, armhf: Pass, i386: Pass, ppc64el: Test in progress
- ∙ ∙ autopkgtest for nexus/4.4.3-5: amd64: Pass, arm64: Pass, armel: Pass, armhf: Pass, i386: Pass, ppc64el: Test in progress, s390x: Pass
- ∙ ∙ autopkgtest for octave/7.3.0-1: amd64: Pass, arm64: Pass, armel: Pass, armhf: Pass, i386: Pass, ppc64el: Test in progress, s390x: Pass
- ∙ ∙ autopkgtest for opencv/4.6.0+dfsg-9: amd64: Pass, arm64: Pass, armel: Pass, armhf: Pass, i386: Pass, ppc64el: Test in progress, s390x: Pass
- ∙ ∙ autopkgtest for openems/0.0.35+git20190103.6a75e98+dfsg.1-3.1: amd64: No test results, arm64: No test results, i386: No test results, ppc64el: Test in progress, s390x: No test results
- ∙ ∙ autopkgtest for openmolcas/22.02-6: amd64: Pass, arm64: Pass, ppc64el: Test in progress, s390x: Not a regression
- ∙ ∙ autopkgtest for petsc/3.17.5+dfsg1-1: amd64: Pass, arm64: Pass, armel: Pass, armhf: Pass, i386: Pass, ppc64el: Test in progress, s390x: Pass
- ∙ ∙ autopkgtest for picopore/1.2.0-2: amd64: Pass, arm64: Pass, armel: Pass, armhf: Pass, i386: Pass, ppc64el: Test in progress, s390x: Pass
- ∙ ∙ autopkgtest for pytables/3.7.0-4: amd64: Pass, arm64: Pass, armel: Pass, armhf: Pass, i386: Pass, ppc64el: Test in progress, s390x: Pass
- ∙ ∙ autopkgtest for r-bioc-dropletutils/1.16.0+ds-1: amd64: Pass, arm64: Pass, armel: Pass, armhf: Pass, i386: Pass, ppc64el: Test in progress, s390x: Pass
- ∙ ∙ autopkgtest for r-bioc-hdf5array/1.24.2-1: amd64: Pass, arm64: Pass, armel: Pass, armhf: Pass, i386: Pass, ppc64el: Test in progress, s390x: Pass
- ∙ ∙ autopkgtest for r-cran-hdf5r/1.3.7+dfsg-1: amd64: Pass, arm64: Pass, armel: Not a regression, armhf: Pass, i386: Pass, ppc64el: Test in progress, s390x: Not a regression
- ∙ ∙ autopkgtest for ruby-hdfeos5/1.2-11: amd64: Pass, arm64: Pass, armel: Pass, armhf: Pass, i386: Pass, ppc64el: Test in progress, s390x: Pass
- ∙ ∙ autopkgtest for scrappie/1.4.2-8: amd64: Pass, arm64: Pass, armhf: Pass, i386: Pass, ppc64el: Test in progress, s390x: Pass
- ∙ ∙ autopkgtest for seer/1.1.4-7: amd64: Pass, arm64: Pass, armel: Pass, armhf: Pass, i386: Pass, ppc64el: Test in progress, s390x: Pass
- ∙ ∙ autopkgtest for simka/1.5.3-6: amd64: Pass, arm64: Pass, i386: Pass, ppc64el: Test in progress, s390x: Pass
- ∙ ∙ autopkgtest for slepc/3.17.2+dfsg1-2: amd64: Pass, arm64: Pass, armel: Pass, armhf: Pass, i386: Test in progress, ppc64el: Test in progress, s390x: Pass
- ∙ ∙ autopkgtest for slurm-wlm/21.08.8.2-1.1: amd64: Pass, arm64: Pass, armel: Pass, armhf: Pass, i386: Test in progress (will not be considered a regression), ppc64el: Test in progress, s390x: Pass
- ∙ ∙ autopkgtest for uncalled/2.2+ds1-1: amd64: Pass, arm64: Pass, armel: Pass, armhf: Pass, i386: Test in progress, ppc64el: Test in progress, s390x: Pass
- ∙ ∙ autopkgtest for unifrac/0.10.0-3: amd64: Pass, arm64: Pass, ppc64el: Test in progress
- ∙ ∙ autopkgtest for vtk7/7.1.1+dfsg2-10.2: amd64: Pass, arm64: Pass, armel: Pass, armhf: Pass, i386: Test in progress, ppc64el: Test in progress, s390x: Pass
- ∙ ∙ autopkgtest for vtk9/9.1.0+really9.1.0+dfsg2-4: amd64: Pass, arm64: Pass, armel: Pass, armhf: Pass, i386: Test in progress, ppc64el: Test in progress, s390x: Pass
- ∙ ∙ autopkgtest for xmds2/3.1.0+dfsg2-1: arm64: Pass, armel: Pass, armhf: Pass, i386: Test in progress, s390x: Not a regression
- ∙ ∙ autopkgtest for xmds2/blocked-on-ci-infra: amd64: Ignored failure, ppc64el: Not a regression
- ∙ ∙ Too young, only 1 of 5 days old
- Additional info:
- ∙ ∙ Piuparts tested OK - https://piuparts.debian.org/sid/source/h/hdf5.html
- Not considered

news

[rss feed]

[2022-11-26] Accepted hdf5 1.10.8+repack-4 (source) into unstable (Gilles Filippini)
[2022-11-25] Accepted hdf5 1.10.8+repack-3 (source) into unstable (Gilles Filippini)
[2022-11-22] Accepted hdf5 1.10.8+repack-2 (source) into unstable (Gilles Filippini)
[2022-09-27] hdf5 1.10.8+repack-1 MIGRATED to testing (Debian testing watch)
[2022-08-22] Accepted hdf5 1.10.8+repack-1 (source) into unstable (Gilles Filippini)
[2022-05-01] Accepted hdf5 1.12.2+repack-1~exp1 (source) into experimental (Gilles Filippini)
[2021-10-18] hdf5 1.10.7+repack-4 MIGRATED to testing (Debian testing watch)
[2021-10-12] Accepted hdf5 1.10.7+repack-4 (source) into unstable (Gilles Filippini)
[2021-10-03] Accepted hdf5 1.10.7+repack-3 (source) into unstable (Gilles Filippini)
[2021-09-30] Accepted hdf5 1.10.7+repack-2 (source) into unstable (Gilles Filippini)
[2021-09-29] hdf5 1.10.7+repack-1 MIGRATED to testing (Debian testing watch)
[2021-09-20] Accepted hdf5 1.10.6+repack-4+deb11u1 (source) into proposed-updates->stable-new, proposed-updates (Debian FTP Masters) (signed by: Gilles Filippini)
[2021-09-09] Accepted hdf5 1.10.7+repack-1 (source) into unstable (Gilles Filippini)
[2021-08-17] hdf5 1.10.6+repack-5 MIGRATED to testing (Debian testing watch)
[2021-08-11] Accepted hdf5 1.10.6+repack-5 (source) into unstable (Gilles Filippini)
[2021-06-22] hdf5 1.10.6+repack-4 MIGRATED to testing (Debian testing watch)
[2021-06-16] Accepted hdf5 1.10.6+repack-4 (source) into unstable (Gilles Filippini)
[2021-06-14] Accepted hdf5 1.10.6+repack-3 (source) into unstable (Gilles Filippini)
[2020-05-05] hdf5 1.10.6+repack-2 MIGRATED to testing (Debian testing watch)
[2020-04-25] Accepted hdf5 1.10.6+repack-2 (source) into unstable (Gilles Filippini)
[2020-04-25] hdf5 1.10.6+repack-1 MIGRATED to testing (Debian testing watch)
[2020-04-23] Accepted hdf5 1.12.0+repack-1~exp2 (source) into experimental (Gilles Filippini)
[2020-04-02] Accepted hdf5 1.12.0+repack-1~exp1 (source amd64 all) into experimental, experimental (Debian FTP Masters) (signed by: Gilles Filippini)
[2020-03-28] Accepted hdf5 1.10.6+repack-1 (source) into unstable (Gilles Filippini)
[2020-03-18] Accepted hdf5 1.10.6+repack-1~exp5 (source) into experimental (Gilles Filippini)
[2020-03-16] Accepted hdf5 1.10.6+repack-1~exp4 (source) into experimental (Gilles Filippini)
[2020-02-29] hdf5 1.10.4+repack-11 MIGRATED to testing (Debian testing watch)
[2020-02-23] Accepted hdf5 1.10.4+repack-11 (source) into unstable (Gilles Filippini)
[2020-01-05] Accepted hdf5 1.10.6+repack-1~exp3 (source) into experimental (Gilles Filippini)
[2019-12-29] Accepted hdf5 1.10.6+repack-1~exp2 (source) into experimental (Gilles Filippini)

bugs [bug history graph]

all: 13
RC: 0
I&N: 11
M&W: 2
F&P: 0
patch: 0

links

homepage
lintian (0, 47)
buildd: logs, exp, checks, reproducibility, cross
popcon
browse source code
edit tags
other distros
security tracker

ubuntu

[Information about Ubuntu for Debian Developers]

version: 1.10.8+repack-1ubuntu1
13 bugs (1 patch)
patches for 1.10.8+repack-1ubuntu1