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hisat2

graph-based alignment of short nucleotide reads to many genomes

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general

source: hisat2 (main)
version: 2.1.0-2
maintainer: Debian Med Packaging Team (archive) [DMD] [LowNMU]
uploaders: Michael R. Crusoe [DMD]
arch: amd64 kfreebsd-amd64
std-ver: 4.2.1
VCS: Git (Browse, QA)

versions [more versions can be listed by madison] [old versions available from snapshot.debian.org]

[pool directory]

stable: 2.0.5-1
testing: 2.1.0-2
unstable: 2.1.0-2

versioned links

2.0.5-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
2.1.0-2: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]

binaries

hisat2

action needed

version in VCS is newer than in repository, is it time to upload? normal

vcswatch reports that this package seems to have a new changelog entry (version 2.1.0-3, distribution UNRELEASED) and new commits in its VCS. You should consider whether it's time to make an upload.

Here are the relevant commit messages:

commit 8c33f70533310cf602c9028e42994a262987a36a
Author: Steffen Moeller <moeller@debian.org>
Date:   Thu Apr 18 00:55:00 2019 +0200

    Extending support for Python files of hisat2
    
    bcbio needs them to build-testing

commit cc4f2173ebdc7ef9c2c60239e6eea91272777fe4
Author: Andreas Tille <tille@debian.org>
Date:   Mon Mar 25 11:37:02 2019 +0100

    Add lintian override since we need the .py extension for usage in bcbio

commit 656051ed9c758366dcbd60cb2d70956115708702
Author: Andreas Tille <tille@debian.org>
Date:   Mon Mar 25 11:36:03 2019 +0100

    Install hisat2_extract_splice_sites.py

commit d721a700ee92e0c0776f3202759f67a366f3324a
Author: Steffen Möller <moeller@debian.org>
Date:   Sun Mar 10 13:34:17 2019 +0000

    Updated RRID in d/u/metadata

Created: 2019-03-10 Last update: 2019-06-15 18:55

Standards version of the package is outdated. wishlist

The package should be updated to follow the last version of Debian Policy (Standards-Version 4.3.0 instead of 4.2.1).

Created: 2018-12-23 Last update: 2018-12-23 17:15

news

[2018-09-29] hisat2 2.1.0-2 MIGRATED to testing (Debian testing watch)
[2018-09-24] Accepted hisat2 2.1.0-2 (source) into unstable (Andreas Tille)
[2017-09-09] hisat2 2.1.0-1 MIGRATED to testing (Debian testing watch)
[2017-09-04] Accepted hisat2 2.1.0-1 (source amd64) into unstable (Andreas Tille)
[2016-12-20] hisat2 2.0.5-1 MIGRATED to testing (Debian testing watch)
[2016-12-09] Accepted hisat2 2.0.5-1 (source amd64) into unstable (Andreas Tille)
[2016-08-31] hisat2 2.0.4-2 MIGRATED to testing (Debian testing watch)
[2016-08-25] Accepted hisat2 2.0.4-2 (source amd64) into unstable (Sascha Steinbiss)
[2016-08-24] hisat2 2.0.4-1 MIGRATED to testing (Debian testing watch)
[2016-08-19] Accepted hisat2 2.0.4-1 (source amd64) into unstable, unstable (Michael R. Crusoe) (signed by: Sascha Steinbiss)

bugs [bug history graph]

all: 0

links

homepage
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ubuntu

[Information about Ubuntu for Debian Developers]

version: 2.1.0-2

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