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hts-nim-tools

tools biological sequences: bam-filter, count-reads, vcf-check

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general
  • source: hts-nim-tools (main)
  • version: 0.2.1-2
  • maintainer: Debian Med Packaging Team (archive) (DMD) (LowNMU)
  • uploaders: Steffen Moeller [DMD] – Nilesh Patra [DMD]
  • arch: any
  • std-ver: 4.7.0
  • VCS: Git (Browse, QA)
versions [more versions can be listed by madison] [old versions available from snapshot.debian.org]
[pool directory]
  • oldstable: 0.2.1-1
  • stable: 0.2.1-1
  • unstable: 0.2.1-2
versioned links
  • 0.2.1-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
  • 0.2.1-2: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
binaries
  • hts-nim-tools
action needed
Debci reports failed tests high
  • unstable: fail (log)
    The tests ran in 0:00:16
    Last run: 2025-05-15T00:53:42.000Z
    Previous status: unknown

  • testing: pass (log)
    The tests ran in 0:00:23
    Last run: 2024-07-11T16:43:34.000Z
    Previous status: unknown

  • stable: pass (log)
    The tests ran in 0:00:17
    Last run: 2025-03-25T16:56:57.000Z
    Previous status: unknown

Created: 2025-02-27 Last update: 2025-05-30 09:31
source package has 3 unsatisfiable build dependencies high
  • Build dependencies in unstable cannot be satisfied on s390x because: unsatisfied dependency on nim
  • Build dependencies in unstable cannot be satisfied on mips64el, amd64, armel, ppc64el, armhf, and i386 because: unsatisfied dependency on libpcre3
  • Build dependencies in unstable cannot be satisfied on arm64 because: unsatisfied dependency on libpcre3
Created: 2025-02-05 Last update: 2025-05-30 09:30
2 binary packages have unsatisfiable dependencies high
  • The dependencies of hts-nim-tools=0.2.1-2 cannot be satisfied in unstable on mips64el, amd64, armel, ppc64el, armhf, and i386 because: unsatisfied dependency on libpcre3
  • The dependencies of hts-nim-tools=0.2.1-2 cannot be satisfied in unstable on arm64 because: unsatisfied dependency on libpcre3
Created: 2025-02-05 Last update: 2025-05-30 09:30
The package has not entered testing even though the delay is over normal
The package has not entered testing even though the 20-day delay is over. Check why.
Created: 2024-12-04 Last update: 2025-05-30 08:32
Depends on packages which need a new maintainer normal
The packages that hts-nim-tools depends on which need a new maintainer are:
  • nim (#1074512)
    • Build-Depends: nim
Created: 2024-06-30 Last update: 2025-05-30 07:34
lintian reports 4 warnings normal
Lintian reports 4 warnings about this package. You should make the package lintian clean getting rid of them.
Created: 2021-01-27 Last update: 2022-07-30 12:14
Standards version of the package is outdated. wishlist
The package should be updated to follow the last version of Debian Policy (Standards-Version 4.7.2 instead of 4.7.0).
Created: 2025-02-21 Last update: 2025-02-27 13:24
testing migrations
  • excuses:
    • Migrates after: nim, nim-docopt, nim-hts, nim-kexpr, nim-lapper, nim-regex, nim-unicodedb, nim-unicodeplus
    • Migration status for hts-nim-tools (- to 0.2.1-2): BLOCKED: Rejected/violates migration policy/introduces a regression
    • Issues preventing migration:
    • ∙ ∙ autopkgtest for hts-nim-tools/0.2.1-2: amd64: Regression or new test ♻, arm64: Regression or new test ♻, armel: Regression or new test ♻, armhf: Regression or new test ♻, i386: Regression or new test ♻, ppc64el: Regression or new test ♻, riscv64: Regression or new test ♻
    • ∙ ∙ blocked by freeze: is not in testing
    • ∙ ∙ Build-Depends(-Arch): hts-nim-tools nim (not considered)
    • ∙ ∙ Build-Depends(-Arch): hts-nim-tools nim-docopt (not considered)
    • ∙ ∙ Build-Depends(-Arch): hts-nim-tools nim-hts (not considered)
    • ∙ ∙ Build-Depends(-Arch): hts-nim-tools nim-kexpr (not considered)
    • ∙ ∙ Build-Depends(-Arch): hts-nim-tools nim-lapper (not considered)
    • ∙ ∙ Build-Depends(-Arch): hts-nim-tools nim-regex (not considered)
    • ∙ ∙ Build-Depends(-Arch): hts-nim-tools nim-unicodedb (not considered)
    • ∙ ∙ Build-Depends(-Arch): hts-nim-tools nim-unicodeplus (not considered)
    • ∙ ∙ Depends: hts-nim-tools nim-hts (not considered)
    • Additional info:
    • ∙ ∙ Piuparts tested OK - https://piuparts.debian.org/sid/source/h/hts-nim-tools.html
    • ∙ ∙ Waiting for reproducibility test results on amd64 - info ♻
    • ∙ ∙ Waiting for reproducibility test results on arm64 - info ♻
    • ∙ ∙ Reproducible on armhf - info ♻
    • ∙ ∙ Waiting for reproducibility test results on i386 - info ♻
    • ∙ ∙ 179 days old (needed 20 days)
    • Not considered
news
[rss feed]
  • [2024-12-02] Accepted hts-nim-tools 0.2.1-2 (source) into unstable (Andreas Tille)
  • [2024-07-16] hts-nim-tools REMOVED from testing (Debian testing watch)
  • [2022-11-29] hts-nim-tools 0.2.1-1 MIGRATED to testing (Debian testing watch)
  • [2022-06-14] hts-nim-tools REMOVED from testing (Debian testing watch)
  • [2020-11-18] hts-nim-tools 0.2.1-1 MIGRATED to testing (Debian testing watch)
  • [2020-11-18] hts-nim-tools 0.2.1-1 MIGRATED to testing (Debian testing watch)
  • [2020-11-13] Accepted hts-nim-tools 0.2.1-1 (source) into unstable (Nilesh Patra)
  • [2020-11-12] Accepted hts-nim-tools 0.2.0-3 (source) into unstable (Steffen Moeller)
  • [2020-11-09] Accepted hts-nim-tools 0.2.0-2 (source) into unstable (Nilesh Patra)
  • [2020-11-08] Accepted hts-nim-tools 0.2.0-1 (source amd64) into unstable, unstable (Debian FTP Masters) (signed by: Steffen Moeller)
bugs [bug history graph]
  • all: 0
links
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  • lintian (0, 4)
  • buildd: logs, checks, debcheck, cross
  • popcon
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ubuntu Ubuntu logo [Information about Ubuntu for Debian Developers]
  • version: 0.2.1-2
  • 1 bug

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