Debian Package Tracker

general

source: htsjdk (main)
version: 2.14.3+dfsg-2
maintainer: Debian Med Packaging Team (archive) [DMD] [LowNMU]
uploaders: Vincent Danjean [DMD] – Charles Plessy [DMD] – Andreas Tille [DMD] – Olivier Sallou [DMD]
arch: all
std-ver: 4.1.4
VCS: Git (Browse, QA)

versions [more versions can be listed by madison] [old versions available from snapshot.debian.org]

[pool directory]

old-bpo: 2.1.1+dfsg.1-1~bpo8+1
stable: 2.8.1+dfsg-1
testing: 2.8.1+dfsg-2
unstable: 2.14.3+dfsg-2

versioned links

2.1.1+dfsg.1-1~bpo8+1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
2.8.1+dfsg-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
2.8.1+dfsg-2: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
2.14.3+dfsg-2: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]

binaries

libhtsjdk-java
libhtsjdk-java-doc

action needed

Marked for autoremoval on 14 July: #894289 high

Version 2.8.1+dfsg-2 of htsjdk is marked for autoremoval from testing on Sat 14 Jul 2018. It is affected by #894289. The removal of htsjdk will also cause the removal of (transitive) reverse dependencies: beagle, chromhmm, fastqc, paleomix, picard-tools, qcumber, surankco. You should try to prevent the removal by fixing these RC bugs.

Created: 2018-04-04 Last update: 2018-06-21 20:11

A new upstream version is available: 2.16.0 high

A new upstream version 2.16.0 is available, you should consider packaging it.

Created: 2017-11-21 Last update: 2018-06-21 20:00

Fails to build during reproducibility testing normal

A package building reproducibly enables third parties to verify that the source matches the distributed binaries. It has been identified that this source package produced different results, failed to build or had other issues in a test environment. Please read about how to improve the situation!

Created: 2017-11-06 Last update: 2018-06-21 20:12

The package has not entered testing even though the delay is over normal

The package has not entered testing even though the 5-day delay is over. Check why.

Created: 2018-05-29 Last update: 2018-06-21 19:57

lintian reports 8 warnings normal

Lintian reports 8 warnings about this package. You should make the package lintian clean getting rid of them.

Created: 2018-04-15 Last update: 2018-06-19 08:22

Multiarch hinter reports 1 issue(s) low

There are issues with the multiarch metadata for this package.

libhtsjdk-java-doc could be marked Multi-Arch: foreign

Created: 2016-09-14 Last update: 2018-06-21 20:14

testing migrations

excuses:
- 29 days old (5 needed)
- libhtsjdk-java/arm64 unsatisfiable Depends: libngs-java
- libhtsjdk-java/armel unsatisfiable Depends: libngs-java
- libhtsjdk-java/armhf unsatisfiable Depends: libngs-java
- libhtsjdk-java/mips unsatisfiable Depends: libngs-java
- libhtsjdk-java/mips64el unsatisfiable Depends: libngs-java
- libhtsjdk-java/mipsel unsatisfiable Depends: libngs-java
- libhtsjdk-java/ppc64el unsatisfiable Depends: libngs-java
- libhtsjdk-java/s390x unsatisfiable Depends: libngs-java
- Updating htsjdk introduces new bugs: #900011
- Updating htsjdk fixes old bugs: #894289
- Piuparts tested OK - https://piuparts.debian.org/sid/source/h/htsjdk.html
- autopkgtest for beagle/4.1~180127+dfsg-1: amd64: Pass
- autopkgtest for chromhmm/1.14+dfsg-1: amd64: Pass
- autopkgtest for fastqc/0.11.7+dfsg-1: amd64: Always failed
- autopkgtest for picard-tools/2.8.1+dfsg-4: amd64: Pass
- Not considered

news

[rss feed]

[2018-05-24] Accepted htsjdk 2.14.3+dfsg-2 (source) into unstable (Andreas Tille)
[2018-04-17] Accepted htsjdk 2.14.3+dfsg-1 (source) into experimental (Andreas Tille)
[2017-11-06] htsjdk 2.8.1+dfsg-2 MIGRATED to testing (Debian testing watch)
[2017-11-01] Accepted htsjdk 2.8.1+dfsg-2 (source all) into unstable (Olivier Sallou)
[2016-12-31] htsjdk 2.8.1+dfsg-1 MIGRATED to testing (Debian testing watch)
[2016-12-31] htsjdk 2.8.1+dfsg-1 MIGRATED to testing (Debian testing watch)
[2016-12-19] Accepted htsjdk 2.8.1+dfsg-1 (source all) into unstable (Andreas Tille)
[2016-12-03] htsjdk 2.7.0+dfsg-2 MIGRATED to testing (Debian testing watch)
[2016-11-27] Accepted htsjdk 2.7.0+dfsg-2 (all source) into unstable (Vincent Danjean)
[2016-11-27] Accepted htsjdk 2.7.0+dfsg-1 (all source) into unstable (Vincent Danjean)
[2016-09-15] htsjdk 2.6.1+dfsg-1 MIGRATED to testing (Debian testing watch)
[2016-09-10] Accepted htsjdk 2.6.1+dfsg-1 (source all) into unstable (Andreas Tille)
[2016-07-17] htsjdk 2.5.0+dfsg.2-2 MIGRATED to testing (Debian testing watch)
[2016-07-10] Accepted htsjdk 2.5.0+dfsg.2-2 (source all) into unstable (Andreas Tille)
[2016-07-07] Accepted htsjdk 2.5.0+dfsg.2-1 (all source) into unstable (Vincent Danjean)
[2016-05-04] Accepted htsjdk 2.1.1+dfsg.1-1~bpo8+1 (source all) into jessie-backports, jessie-backports (Andreas Tille)
[2016-04-10] htsjdk 2.1.1+dfsg.1-1 MIGRATED to testing (Debian testing watch)
[2016-04-05] Accepted htsjdk 2.1.1+dfsg.1-1 (source all) into unstable (Vincent Danjean) (signed by: Andreas Tille)
[2016-02-21] htsjdk 2.0.1+dfsg.1-1 MIGRATED to testing (Debian testing watch)
[2016-02-15] Accepted htsjdk 2.0.1+dfsg.1-1 (source all) into unstable (Andreas Tille)
[2015-12-19] Accepted htsjdk 1.138+dfsg.1-4 (all source) into unstable (Vincent Danjean)
[2015-12-19] Accepted htsjdk 1.138+dfsg.1-2 (all source) into unstable, unstable (Vincent Danjean)

bugs [bug history graph]

all: 2
RC: 1
I&N: 1
M&W: 0
F&P: 0

links

homepage
lintian (0, 8)
buildd: logs, clang, reproducibility
popcon
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ubuntu

[Information about Ubuntu for Debian Developers]

version: 2.14.3+dfsg-2
1 bug