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r-bioc-gviz

Plotting data and annotation information along genomic coordinates

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general
  • source: r-bioc-gviz (main)
  • version: 1.50.0+dfsg-2
  • maintainer: Debian R Packages Maintainers (archive) (DMD) (LowNMU)
  • uploaders: Andreas Tille [DMD]
  • arch: all
  • std-ver: 4.7.0
  • VCS: Git (Browse, QA)
versions [more versions can be listed by madison] [old versions available from snapshot.debian.org]
[pool directory]
  • o-o-stable: 1.34.0+dfsg-1
  • oldstable: 1.42.1+dfsg-1
  • stable: 1.50.0+dfsg-2
  • unstable: 1.50.0+dfsg-2
versioned links
  • 1.34.0+dfsg-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
  • 1.42.1+dfsg-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
  • 1.50.0+dfsg-2: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
binaries
  • r-bioc-gviz
action needed
Debci reports failed tests high
  • unstable: pass (log)
    The tests ran in 0:02:23
    Last run: 2025-11-04T22:22:24.000Z
    Previous status: unknown

  • testing: fail (log)
    The tests ran in 0:00:20
    Last run: 2025-11-27T15:31:40.000Z
    Previous status: unknown

  • stable: pass (log)
    The tests ran in 0:01:54
    Last run: 2025-11-09T04:03:45.000Z
    Previous status: unknown

Created: 2025-11-27 Last update: 2025-11-30 01:01
A new upstream version is available: 1.54.0 high
A new upstream version 1.54.0 is available, you should consider packaging it.
Created: 2025-11-27 Last update: 2025-11-29 23:30
debian/patches: 1 patch with invalid metadata high

Among the 1 debian patch available in version 1.50.0+dfsg-2 of the package, we noticed the following issues:

  • 1 patch with invalid metadata that ought to be fixed.
Created: 2023-02-26 Last update: 2025-01-15 00:03
The package has not entered testing even though the delay is over normal
The package has not entered testing even though the 2-day delay is over. Check why.
Created: 2025-11-23 Last update: 2025-11-30 00:02
Standards version of the package is outdated. wishlist
The package should be updated to follow the last version of Debian Policy (Standards-Version 4.7.2 instead of 4.7.0).
Created: 2025-02-21 Last update: 2025-02-27 13:25
testing migrations
  • excuses:
    • Migration status: Blocked. Can't migrate due to a non-migratable dependency. Check status below.
    • Blocked by: r-bioc-genomeinfodb
    • Migrates after: r-bioc-annotationdbi, r-bioc-biomart, r-bioc-biostrings, r-bioc-biovizbase, r-bioc-bsgenome, r-bioc-ensembldb, r-bioc-genomicalignments, r-bioc-genomicfeatures, r-bioc-genomicranges, r-bioc-rsamtools, r-bioc-rtracklayer
    • Migration status for r-bioc-gviz (- to 1.50.0+dfsg-2): BLOCKED: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
    • Issues preventing migration:
    • ∙ ∙ Build-Depends(-Arch): r-bioc-gviz r-bioc-genomeinfodb (not considered)
    • ∙ ∙ Depends: r-bioc-gviz r-bioc-genomeinfodb (not considered)
    • ∙ ∙ Invalidated by build-dependency
    • ∙ ∙ Invalidated by dependency
    • ∙ ∙ Build-Depends(-Arch): r-bioc-gviz r-bioc-annotationdbi
    • ∙ ∙ Build-Depends(-Arch): r-bioc-gviz r-bioc-biomart
    • ∙ ∙ Build-Depends(-Arch): r-bioc-gviz r-bioc-biostrings
    • ∙ ∙ Build-Depends(-Arch): r-bioc-gviz r-bioc-biovizbase
    • ∙ ∙ Build-Depends(-Arch): r-bioc-gviz r-bioc-bsgenome
    • ∙ ∙ Build-Depends(-Arch): r-bioc-gviz r-bioc-ensembldb
    • ∙ ∙ Build-Depends(-Arch): r-bioc-gviz r-bioc-genomicalignments
    • ∙ ∙ Build-Depends(-Arch): r-bioc-gviz r-bioc-genomicfeatures
    • ∙ ∙ Build-Depends(-Arch): r-bioc-gviz r-bioc-genomicranges
    • ∙ ∙ Build-Depends(-Arch): r-bioc-gviz r-bioc-rsamtools
    • ∙ ∙ Build-Depends(-Arch): r-bioc-gviz r-bioc-rtracklayer
    • ∙ ∙ Depends: r-bioc-gviz r-bioc-annotationdbi
    • ∙ ∙ Depends: r-bioc-gviz r-bioc-biomart
    • ∙ ∙ Depends: r-bioc-gviz r-bioc-biostrings
    • ∙ ∙ Depends: r-bioc-gviz r-bioc-biovizbase
    • ∙ ∙ Depends: r-bioc-gviz r-bioc-bsgenome
    • ∙ ∙ Depends: r-bioc-gviz r-bioc-ensembldb
    • ∙ ∙ Depends: r-bioc-gviz r-bioc-genomicalignments
    • ∙ ∙ Depends: r-bioc-gviz r-bioc-genomicfeatures
    • ∙ ∙ Depends: r-bioc-gviz r-bioc-genomicranges
    • ∙ ∙ Depends: r-bioc-gviz r-bioc-rsamtools
    • ∙ ∙ Depends: r-bioc-gviz r-bioc-rtracklayer
    • Additional info (not blocking):
    • ∙ ∙ Piuparts tested OK - https://piuparts.debian.org/sid/source/r/r-bioc-gviz.html
    • ∙ ∙ Autopkgtest skipped on i386: not installable (which is allowed)
    • ∙ ∙ Autopkgtest for r-bioc-gviz/1.50.0+dfsg-2: amd64: Pass, arm64: Pass, ppc64el: Pass, riscv64: Pass, s390x: Pass
    • ∙ ∙ Reproducible on amd64 - info ♻
    • ∙ ∙ Reproducible on arm64 - info ♻
    • ∙ ∙ Required age reduced by 3 days because of autopkgtest
    • ∙ ∙ 320 days old (needed 2 days)
    • Not considered
news
[rss feed]
  • [2025-11-24] r-bioc-gviz REMOVED from testing (Debian testing watch)
  • [2025-01-22] r-bioc-gviz 1.50.0+dfsg-2 MIGRATED to testing (Debian testing watch)
  • [2025-01-21] r-bioc-gviz REMOVED from testing (Debian testing watch)
  • [2025-01-14] Accepted r-bioc-gviz 1.50.0+dfsg-2 (source) into unstable (Michael R. Crusoe)
  • [2024-12-08] r-bioc-gviz 1.48.0+dfsg-1 MIGRATED to testing (Debian testing watch)
  • [2024-12-07] r-bioc-gviz REMOVED from testing (Debian testing watch)
  • [2024-12-03] Accepted r-bioc-gviz 1.50.0+dfsg-1 (source) into experimental (Michael R. Crusoe)
  • [2024-09-10] r-bioc-gviz 1.48.0+dfsg-1 MIGRATED to testing (Debian testing watch)
  • [2024-08-18] Accepted r-bioc-gviz 1.48.0+dfsg-1 (source) into unstable (Michael R. Crusoe)
  • [2024-08-07] Accepted r-bioc-gviz 1.48.0+dfsg-1~0exp1 (source) into experimental (Michael R. Crusoe)
  • [2024-07-14] Accepted r-bioc-gviz 1.48.0+dfsg-1~0exp (source) into experimental (Michael R. Crusoe)
  • [2024-06-25] r-bioc-gviz REMOVED from testing (Debian testing watch)
  • [2024-04-26] r-bioc-gviz 1.46.1+dfsg-1 MIGRATED to testing (Debian testing watch)
  • [2024-03-22] r-bioc-gviz REMOVED from testing (Debian testing watch)
  • [2023-12-17] r-bioc-gviz 1.46.1+dfsg-1 MIGRATED to testing (Debian testing watch)
  • [2023-12-08] Accepted r-bioc-gviz 1.46.1+dfsg-1 (source) into unstable (Andreas Tille)
  • [2023-10-14] r-bioc-gviz 1.44.2+dfsg-1 MIGRATED to testing (Debian testing watch)
  • [2023-10-09] Accepted r-bioc-gviz 1.44.2+dfsg-1 (source) into unstable (Andreas Tille)
  • [2023-08-18] Accepted r-bioc-gviz 1.44.1+dfsg-1 (source) into unstable (Andreas Tille)
  • [2023-07-27] Accepted r-bioc-gviz 1.44.0+dfsg-1 (source) into unstable (Andreas Tille)
  • [2023-07-14] r-bioc-gviz REMOVED from testing (Debian testing watch)
  • [2023-03-08] r-bioc-gviz 1.42.1+dfsg-1 MIGRATED to testing (Debian testing watch)
  • [2023-02-26] Accepted r-bioc-gviz 1.42.1+dfsg-1 (source) into unstable (Andreas Tille)
  • [2022-12-06] r-bioc-gviz 1.42.0+dfsg-1 MIGRATED to testing (Debian testing watch)
  • [2022-12-05] r-bioc-gviz REMOVED from testing (Debian testing watch)
  • [2022-11-22] Accepted r-bioc-gviz 1.42.0+dfsg-1 (source) into unstable (Andreas Tille)
  • [2022-05-24] r-bioc-gviz 1.40.1+dfsg-1 MIGRATED to testing (Debian testing watch)
  • [2022-05-17] Accepted r-bioc-gviz 1.40.1+dfsg-1 (source) into unstable (Andreas Tille)
  • [2022-02-02] r-bioc-gviz 1.38.3+dfsg-1 MIGRATED to testing (Debian testing watch)
  • [2022-01-30] Accepted r-bioc-gviz 1.38.3+dfsg-1 (source) into unstable (Andreas Tille)
  • 1
  • 2
bugs [bug history graph]
  • all: 0
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  • version: 1.50.0+dfsg-2

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