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diamond-aligner

accelerated BLAST compatible local sequence aligner

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general

source: diamond-aligner (main)
version: 2.2.8-1
maintainer: Debian Med Packaging Team (archive) (DMD) (LowNMU)
uploaders: Andreas Tille [DMD] – Étienne Mollier [DMD]
arch: arm64 ia64 loong64 ppc64 ppc64el riscv64 s390x sparc64
std-ver: 4.7.4
VCS: Git (Browse, QA)

versions [more versions can be listed by madison] [old versions available from snapshot.debian.org]

[pool directory]

o-o-stable: 2.0.7-1
oldstable: 2.1.3-1
stable: 2.1.11-2
testing: 2.1.14-1
unstable: 2.2.8-1

versioned links

2.0.7-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
2.1.3-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
2.1.11-2: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
2.1.14-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
2.2.6-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
2.2.8-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]

binaries

diamond-aligner

action needed

Marked for autoremoval on 07 November: #1148077 high

Version 2.1.14-1 of diamond-aligner is marked for autoremoval from testing on Sat 07 Nov 2026. It is affected by #1148077. The removal of diamond-aligner will also cause the removal of (transitive) reverse dependencies: cat-bat, proteinortho, transdecoder. You should try to prevent the removal by fixing these RC bugs.

Created: 2026-09-23 Last update: 2026-10-24 13:33

RM: This package has been requested to be removed. normal

This package has been requested to be removed. This means that, when this request gets processed by an ftp-master, this package will no longer be in unstable, and will automatically be removed from testing too afterwards. If for some reason you want keep this package in unstable, please discuss so in the bug. Please see bug number #1151335 for more information.

Created: 2026-10-19 Last update: 2026-10-19 21:30

testing migrations

excuses:
- Migration status for diamond-aligner (2.1.14-1 to 2.2.8-1): BLOCKED: Maybe temporary, maybe blocked but Britney is missing information (check below)
- Issues preventing migration:
- ∙ ∙ Missing build on riscv64
- ∙ ∙ Missing build on s390x
- ∙ ∙ Autopkgtest deferred on riscv64: missing arch:riscv64 build
- ∙ ∙ Autopkgtest deferred on s390x: missing arch:s390x build
- ∙ ∙ Autopkgtest for diamond-aligner/2.2.8-1: amd64: Pass, arm64: Pass, ppc64el: Pass
- ∙ ∙ Lintian check waiting for test results on riscv64, s390x - info
- Additional info (not blocking):
- ∙ ∙ Updating diamond-aligner will fix bugs in testing: #1148077
- ∙ ∙ Piuparts tested OK - https://piuparts.debian.org/sid/source/d/diamond-aligner.html
- ∙ ∙ Reproduced on amd64 - info
- ∙ ∙ Reproduced on arm64 - info
- ∙ ∙ Reproduced on armhf - info
- ∙ ∙ Reproduced on i386 - info
- ∙ ∙ 5 days old (needed 5 days)
- Not considered

news

[2026-10-19] Accepted diamond-aligner 2.2.8-1 (source) into unstable (Andreas Tille)
[2026-09-03] Accepted diamond-aligner 2.2.6-1 (source) into unstable (Andreas Tille)
[2026-08-14] Accepted diamond-aligner 2.2.5-2 (source) into unstable (Andreas Tille)
[2026-08-13] Accepted diamond-aligner 2.2.5-1 (source) into unstable (Andreas Tille)
[2025-10-19] diamond-aligner 2.1.14-1 MIGRATED to testing (Debian testing watch)
[2025-10-17] Accepted diamond-aligner 2.1.14-1 (source) into unstable (Andreas Tille)
[2025-03-11] diamond-aligner 2.1.11-2 MIGRATED to testing (Debian testing watch)
[2025-03-09] Accepted diamond-aligner 2.1.11-2 (source) into unstable (Étienne Mollier)
[2025-03-07] Accepted diamond-aligner 2.1.11-1 (source) into unstable (Étienne Mollier)
[2025-02-18] diamond-aligner 2.1.9-2 MIGRATED to testing (Debian testing watch)
[2025-02-16] Accepted diamond-aligner 2.1.9-2 (source) into unstable (Étienne Mollier)
[2024-02-11] diamond-aligner 2.1.9-1 MIGRATED to testing (Debian testing watch)
[2024-02-07] Accepted diamond-aligner 2.1.9-1 (source) into unstable (Andreas Tille)
[2023-08-21] diamond-aligner 2.1.8-2 MIGRATED to testing (Debian testing watch)
[2023-08-19] Accepted diamond-aligner 2.1.8-2 (source) into unstable (Andreas Tille)
[2023-07-14] diamond-aligner 2.1.8-1 MIGRATED to testing (Debian testing watch)
[2023-07-11] Accepted diamond-aligner 2.1.8-1 (source) into unstable (Andreas Tille)
[2023-03-06] diamond-aligner 2.1.3-1 MIGRATED to testing (Debian testing watch)
[2023-02-23] Accepted diamond-aligner 2.1.3-1 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
[2023-02-20] Accepted diamond-aligner 2.1.1-1 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
[2023-02-01] Accepted diamond-aligner 2.1.0-1 (source) into unstable (Andreas Tille)
[2022-05-04] diamond-aligner 2.0.15-1 MIGRATED to testing (Debian testing watch)
[2022-05-02] Accepted diamond-aligner 2.0.15-1 (source) into unstable (Andreas Tille)
[2022-01-19] diamond-aligner 2.0.14-1 MIGRATED to testing (Debian testing watch)
[2022-01-16] Accepted diamond-aligner 2.0.14-1 (source) into unstable (Andreas Tille)
[2021-11-02] diamond-aligner 2.0.13-1 MIGRATED to testing (Debian testing watch)
[2021-10-31] Accepted diamond-aligner 2.0.13-1 (source) into unstable (Nilesh Patra)
[2021-10-30] diamond-aligner 2.0.12-1 MIGRATED to testing (Debian testing watch)
[2021-10-06] Accepted diamond-aligner 2.0.12-1 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
[2021-09-14] Accepted diamond-aligner 2.0.11-1 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)

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bugs [bug history graph]

all: 0

links

homepage
lintian
buildd: logs, reproducibility, cross
popcon
browse source code
other distros
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ubuntu

[Information about Ubuntu for Debian Developers]

version: 2.2.5-2ubuntu1
patches for 2.2.5-2ubuntu1

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