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python-pyani

Python3 module for average nucleotide identity analyses

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general
  • source: python-pyani (main)
  • version: 0.2.13-1
  • maintainer: Debian Med Packaging Team (archive) (DMD) (LowNMU)
  • uploaders: Étienne Mollier [DMD] – Andreas Tille [DMD]
  • arch: any
  • std-ver: 4.6.2
  • VCS: Git (Browse, QA)
versions [more versions can be listed by madison] [old versions available from snapshot.debian.org]
[pool directory]
  • o-o-stable: 0.2.10-2
  • oldstable: 0.2.12-2
  • stable: 0.2.13-1
  • testing: 0.2.13-1
  • unstable: 0.2.13-1
versioned links
  • 0.2.10-2: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
  • 0.2.12-2: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
  • 0.2.13-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
binaries
  • python3-pyani
action needed
Marked for autoremoval on 05 June due to libcifpp, python-biopython, starlette: #1131072, #1133818, #1134850, #1135451 high
Version 0.2.13-1 of python-pyani is marked for autoremoval from testing on Fri 05 Jun 2026. It depends (transitively) on libcifpp, python-biopython, starlette, affected by #1131072, #1133818, #1134850, #1135451. You should try to prevent the removal by fixing these RC bugs.
Created: 2026-04-21 Last update: 2026-05-10 14:03
A new upstream version is available: 0.2.13.1 high
A new upstream version 0.2.13.1 is available, you should consider packaging it.
Created: 2025-11-27 Last update: 2026-05-10 11:04
debian/patches: 1 patch with invalid metadata high

Among the 2 debian patches available in version 0.2.13-1 of the package, we noticed the following issues:

  • 1 patch with invalid metadata that ought to be fixed.
Created: 2023-02-26 Last update: 2025-03-18 13:35
version in VCS is newer than in repository, is it time to upload? normal
vcswatch reports that this package seems to have a new changelog entry (version 0.2.13.1-1, distribution UNRELEASED) and new commits in its VCS. You should consider whether it's time to make an upload.

Here are the relevant commit messages:
commit 7dcf99cf1768f8032d0e53d41b4ae2a9d134819a
Author: Alexandre Detiste <alexandre.detiste@gmail.com>
Date:   Tue Mar 18 01:35:33 2025 +0100

    interim upload

commit 9e93865b64a6ca629c1cf7ac61b87e4ec80ac32b
Author: Alexandre Detiste <tchet@debian.org>
Date:   Sun Jan 26 23:09:22 2025 +0100

    remove runtime dependency on python3-setuptools

commit 50a6bc02f23a752d7326062374003e4a466fac66
Author: Étienne Mollier <emollier@debian.org>
Date:   Sat Aug 24 19:22:44 2024 +0200

    Update changelog.

commit b847142dc5c27957b559ff500c173e333c9d0c11
Author: Étienne Mollier <emollier@debian.org>
Date:   Sat Aug 24 19:21:29 2024 +0200

    d/rules: skip test_download_dry_run which needs Internet.

commit 3712b0b0ac4ea4f20725dabbf215140298d55966
Author: Étienne Mollier <emollier@debian.org>
Date:   Sat Aug 24 19:21:02 2024 +0200

    d/control: tests depend on many additional python3 modules.

commit bb9fefc9662bd73ba901404dcc9cdbd38dfde6e1
Author: Étienne Mollier <emollier@debian.org>
Date:   Sat Aug 24 17:03:53 2024 +0200

    disable-namedlist.patch: new: disable use of obsolete module.

commit 6459219843dd44b1809410b745823d03ba36122f
Author: Étienne Mollier <emollier@debian.org>
Date:   Sat Aug 24 16:41:02 2024 +0200

    unrelease, many issues were hidden by a transient problem.

commit bdd2426b9255223b92a3d58325c1d4efc2c306f5
Author: Étienne Mollier <emollier@debian.org>
Date:   Thu Aug 22 18:44:55 2024 +0200

    ready for upload to unstable.

commit 76796ea005de78d5080a4bca3cf02d7a201148b7
Author: Étienne Mollier <emollier@debian.org>
Date:   Thu Aug 22 18:44:18 2024 +0200

    d/control: declare compliance to standards version 4.7.0.

commit d55d6b1bdc60109a883a387a598e1e0194716d84
Author: Étienne Mollier <emollier@debian.org>
Date:   Thu Aug 22 18:43:21 2024 +0200

    dataframe_sort.patch: delete: fixed upstream.

commit 8511020b3110c8a83b2e748e7c283cba5a0c2a49
Author: Étienne Mollier <emollier@debian.org>
Date:   Thu Aug 22 18:42:21 2024 +0200

    pytest.patch: delete: upstream migrated away from nosetest.

commit 82712a4e0a9e7bd516e9daf8c3d6e67972cf55df
Merge: d1e9096 a46a74c
Author: Étienne Mollier <emollier@debian.org>
Date:   Thu Aug 22 18:39:38 2024 +0200

    Update upstream source from tag 'upstream/0.2.13.1'
    
    Update to upstream version '0.2.13.1'
    with Debian dir 552b7cd8336b14820ebc13baa4da9c191e3c998a

commit a46a74cb1cb197f68dea7e6b911bd64374d8a72a
Author: Étienne Mollier <emollier@debian.org>
Date:   Thu Aug 22 18:24:15 2024 +0200

    New upstream version 0.2.13.1
Created: 2024-08-22 Last update: 2026-05-10 14:03
Fails to build during reproducibility testing normal
A package building reproducibly enables third parties to verify that the source matches the distributed binaries. It has been identified that this source package produced different results, failed to build or had other issues in a test environment. Please read about how to improve the situation!
Created: 2026-05-04 Last update: 2026-05-10 13:30
lintian reports 1 warning normal
Lintian reports 1 warning about this package. You should make the package lintian clean getting rid of them.
Created: 2025-03-18 Last update: 2025-03-18 22:33
Standards version of the package is outdated. wishlist
The package should be updated to follow the last version of Debian Policy (Standards-Version 4.7.4 instead of 4.6.2).
Created: 2024-04-07 Last update: 2026-03-31 15:01
news
[rss feed]
  • [2025-03-20] python-pyani 0.2.13-1 MIGRATED to testing (Debian testing watch)
  • [2025-03-18] Accepted python-pyani 0.2.13-1 (source) into unstable (Nilesh Patra)
  • [2025-03-18] Accepted python-pyani 0.2.12-4 (source) into unstable (Alexandre Detiste)
  • [2024-04-02] python-pyani 0.2.12-3 MIGRATED to testing (Debian testing watch)
  • [2024-03-08] python-pyani REMOVED from testing (Debian testing watch)
  • [2023-11-27] python-pyani 0.2.12-3 MIGRATED to testing (Debian testing watch)
  • [2023-11-24] Accepted python-pyani 0.2.12-3 (source) into unstable (Ananthu C V) (signed by: Andreas Tille)
  • [2022-12-06] python-pyani 0.2.12-2 MIGRATED to testing (Debian testing watch)
  • [2022-12-03] Accepted python-pyani 0.2.12-2 (source) into unstable (Étienne Mollier)
  • [2022-11-26] python-pyani 0.2.12-1 MIGRATED to testing (Debian testing watch)
  • [2022-11-24] Accepted python-pyani 0.2.12-1 (source) into unstable (Andreas Tille)
  • [2022-07-26] python-pyani 0.2.11-1 MIGRATED to testing (Debian testing watch)
  • [2022-07-23] python-pyani REMOVED from testing (Debian testing watch)
  • [2021-08-20] python-pyani 0.2.11-1 MIGRATED to testing (Debian testing watch)
  • [2021-08-16] Accepted python-pyani 0.2.11-1 (source) into unstable (Nilesh Patra)
  • [2020-03-23] python-pyani 0.2.10-2 MIGRATED to testing (Debian testing watch)
  • [2020-03-20] Accepted python-pyani 0.2.10-2 (source) into unstable (Sao I Kuan) (signed by: Andreas Tille)
  • [2020-02-27] python-pyani 0.2.10-1 MIGRATED to testing (Debian testing watch)
  • [2020-02-21] Accepted python-pyani 0.2.10-1 (source) into unstable (Steffen Moeller)
  • [2019-11-17] Accepted python-pyani 0.2.9-1 (source amd64) into unstable, unstable (Andreas Tille)
bugs [bug history graph]
  • all: 0
links
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  • lintian (0, 1)
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  • popcon
  • browse source code
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  • debci
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  • version: 0.2.13-1

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