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r-bioc-genefilter

methods for filtering genes from microarray experiments

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general
  • source: r-bioc-genefilter (main)
  • version: 1.88.0-3
  • maintainer: Debian R Packages Maintainers (archive) (DMD) (LowNMU)
  • uploaders: Andreas Tille [DMD]
  • arch: any
  • std-ver: 4.7.3
  • VCS: Git (Browse, QA)
versions [more versions can be listed by madison] [old versions available from snapshot.debian.org]
[pool directory]
  • o-o-stable: 1.72.1-1
  • oldstable: 1.80.3-1
  • stable: 1.88.0-2
  • unstable: 1.88.0-3
versioned links
  • 1.72.1-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
  • 1.80.3-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
  • 1.88.0-2: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
  • 1.88.0-3: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
binaries
  • r-bioc-genefilter
action needed
1 binary package has unsatisfiable dependencies high
  • The dependencies of r-bioc-genefilter=1.88.0-3 cannot be satisfied in unstable on amd64, ppc64el, riscv64, loong64, and arm64 because: unsatisfied dependency on r-api-bioc-3.20
Created: 2026-07-11 Last update: 2026-08-05 06:30
Debci reports failed tests high
  • unstable: pass (log)
    The tests ran in 0:01:30
    Last run: 2026-05-26T18:08:55.000Z
    Previous status: unknown

  • testing: fail (log)
    The tests ran in 0:00:25
    Last run: 2025-11-26T21:05:09.000Z
    Previous status: unknown

  • stable: pass (log)
    The tests ran in 0:01:26
    Last run: 2026-07-18T09:08:07.000Z
    Previous status: unknown

Created: 2025-11-26 Last update: 2026-08-05 06:00
A new upstream version is available: 1.94.0 high
A new upstream version 1.94.0 is available, you should consider packaging it.
Created: 2025-11-26 Last update: 2026-08-05 01:02
The package has not entered testing even though the delay is over normal
The package has not entered testing even though the 5-day delay is over. Check why.
Created: 2026-04-13 Last update: 2026-08-05 05:31
version in VCS is newer than in repository, is it time to upload? normal
vcswatch reports that this package seems to have a new changelog entry (version 1.94.0-1, distribution UNRELEASED) and new commits in its VCS. You should consider whether it's time to make an upload.

Here are the relevant commit messages:
commit 426199e7e586aa665671c875959de4ce5229166b
Author: Steffen Moeller <moeller@debian.org>
Date:   Tue Aug 4 15:33:34 2026 +0200

    Drop 'Rules-Requires-Root: no' from d/control (routine-update)

commit 03a96b0d00578651ff446f618383b0e965f7c2bd
Author: Steffen Moeller <moeller@debian.org>
Date:   Tue Aug 4 15:33:34 2026 +0200

    Restrict to R packages team core architectures (routine-update)

commit 884f2079ad1451d796c01492d54589d5fb7a1fa4
Author: Steffen Moeller <moeller@debian.org>
Date:   Tue Aug 4 15:33:12 2026 +0200

    Changes made by cme

commit 3fc9039923c1e408e93b25072419a92b3ce6ace4
Author: Steffen Moeller <moeller@debian.org>
Date:   Tue Aug 4 15:33:06 2026 +0200

    Standards-Version: 4.7.4 (routine-update)

commit 48b1d441db8a48dbbdd4cdb1e3e77410567d08a4
Merge: e8615bd 0f92837
Author: Steffen Moeller <moeller@debian.org>
Date:   Tue Aug 4 15:33:06 2026 +0200

    Update upstream source from tag 'upstream/1.94.0'
    
    Update to upstream version '1.94.0'
    with Debian dir 8a894a9fcc734470c91f3c366fc54202291041b0

commit 0f928375d04b20d60db2245406fdb276163713b2
Author: Steffen Moeller <moeller@debian.org>
Date:   Tue Aug 4 15:33:03 2026 +0200

    New upstream version 1.94.0

commit e8615bd0a9aa529803c08c5a9e018a382fa45f4d
Author: Steffen Moeller <moeller@debian.org>
Date:   Tue Aug 4 15:33:02 2026 +0200

    New upstream version


https://salsa.debian.org/api/v4/projects/r-pkg-team%2Fr-bioc-genefilter API request failed: 401 Unauthorized at /srv/qa.debian.org/data/vcswatch/vcswatch line 410.
Created: 2026-08-04 Last update: 2026-08-04 14:33
debian/patches: 1 patch to forward upstream low

Among the 1 debian patch available in version 1.88.0-3 of the package, we noticed the following issues:

  • 1 patch where the metadata indicates that the patch has not yet been forwarded upstream. You should either forward the patch upstream or update the metadata to document its real status.
Created: 2025-01-14 Last update: 2026-03-15 12:31
Standards version of the package is outdated. wishlist
The package should be updated to follow the last version of Debian Policy (Standards-Version 4.7.4 instead of 4.7.3).
Created: 2026-03-31 Last update: 2026-03-31 15:01
testing migrations
  • This package is part of the ongoing testing transition known as r-api-bioc-3.23. Please avoid uploads unrelated to this transition, they would likely delay it and require supplementary work from the release managers. On the other hand, if your package has problems preventing it to migrate to testing, please fix them as soon as possible. You can probably find supplementary information in the debian-release archives or in the corresponding release.debian.org bug.
  • excuses:
    • Migrates after: r-bioc-annotate, r-bioc-annotationdbi, r-bioc-biobase, r-bioc-matrixgenerics
    • Migration status for r-bioc-genefilter (- to 1.88.0-3): BLOCKED: Rejected/violates migration policy/introduces a regression
    • Issues preventing migration:
    • ∙ ∙ r-bioc-genefilter/amd64 has unsatisfiable dependency
    • ∙ ∙ r-bioc-genefilter/arm64 has unsatisfiable dependency
    • ∙ ∙ r-bioc-genefilter/loong64 has unsatisfiable dependency
    • ∙ ∙ r-bioc-genefilter/ppc64el has unsatisfiable dependency
    • ∙ ∙ r-bioc-genefilter/riscv64 has unsatisfiable dependency
    • ∙ ∙ Build-Depends(-Arch): r-bioc-genefilter r-bioc-annotate (not considered)
    • ∙ ∙ Build-Depends(-Arch): r-bioc-genefilter r-bioc-annotationdbi (not considered)
    • ∙ ∙ Build-Depends(-Arch): r-bioc-genefilter r-bioc-biobase
    • ∙ ∙ Build-Depends(-Arch): r-bioc-genefilter r-bioc-matrixgenerics (not considered)
    • Additional info (not blocking):
    • ∙ ∙ Piuparts tested OK - https://piuparts.debian.org/sid/source/r/r-bioc-genefilter.html
    • ∙ ∙ Autopkgtest skipped on amd64: not installable
    • ∙ ∙ Autopkgtest skipped on arm64: not installable
    • ∙ ∙ Autopkgtest skipped on loong64: not installable
    • ∙ ∙ Autopkgtest skipped on ppc64el: not installable
    • ∙ ∙ Autopkgtest skipped on riscv64: not installable
    • ∙ ∙ Reproduced on amd64 - info
    • ∙ ∙ Reproduced on arm64 - info
    • ∙ ∙ Reproduced on armhf - info
    • ∙ ∙ Reproduced on i386 - info
    • ∙ ∙ 143 days old (needed 5 days)
    • Not considered
news
[rss feed]
  • [2026-03-15] Accepted r-bioc-genefilter 1.88.0-3 (source) into unstable (Charles Plessy)
  • [2025-11-24] r-bioc-genefilter REMOVED from testing (Debian testing watch)
  • [2025-01-22] r-bioc-genefilter 1.88.0-2 MIGRATED to testing (Debian testing watch)
  • [2025-01-13] Accepted r-bioc-genefilter 1.88.0-2 (source) into unstable (Michael R. Crusoe)
  • [2024-11-29] Accepted r-bioc-genefilter 1.88.0-1 (source) into experimental (Michael R. Crusoe)
  • [2024-09-10] r-bioc-genefilter 1.86.0-1 MIGRATED to testing (Debian testing watch)
  • [2024-08-18] Accepted r-bioc-genefilter 1.86.0-1 (source) into unstable (Michael R. Crusoe)
  • [2024-07-30] Accepted r-bioc-genefilter 1.86.0-1~0exp1 (source) into experimental (Michael R. Crusoe)
  • [2024-07-14] Accepted r-bioc-genefilter 1.86.0-1~0exp (source) into experimental (Michael R. Crusoe)
  • [2024-06-25] r-bioc-genefilter REMOVED from testing (Debian testing watch)
  • [2023-12-17] r-bioc-genefilter 1.84.0-1 MIGRATED to testing (Debian testing watch)
  • [2023-11-30] Accepted r-bioc-genefilter 1.84.0-1 (source) into unstable (Andreas Tille)
  • [2023-09-28] r-bioc-genefilter 1.82.1-1 MIGRATED to testing (Debian testing watch)
  • [2023-07-27] Accepted r-bioc-genefilter 1.82.1-1 (source) into unstable (Andreas Tille)
  • [2023-07-14] r-bioc-genefilter REMOVED from testing (Debian testing watch)
  • [2023-01-26] r-bioc-genefilter 1.80.3-1 MIGRATED to testing (Debian testing watch)
  • [2023-01-21] Accepted r-bioc-genefilter 1.80.3-1 (source) into unstable (Andreas Tille)
  • [2022-12-24] r-bioc-genefilter 1.80.2-1 MIGRATED to testing (Debian testing watch)
  • [2022-12-24] r-bioc-genefilter 1.80.2-1 MIGRATED to testing (Debian testing watch)
  • [2022-12-24] r-bioc-genefilter 1.80.2-1 MIGRATED to testing (Debian testing watch)
  • [2022-12-19] Accepted r-bioc-genefilter 1.80.2-1 (source) into unstable (Andreas Tille)
  • [2022-12-07] r-bioc-genefilter 1.80.1-1 MIGRATED to testing (Debian testing watch)
  • [2022-12-05] Accepted r-bioc-genefilter 1.80.1-1 (source) into unstable (Andreas Tille)
  • [2022-12-05] r-bioc-genefilter 1.80.0-1 MIGRATED to testing (Debian testing watch)
  • [2022-11-21] Accepted r-bioc-genefilter 1.80.0-1 (source) into unstable (Andreas Tille)
  • [2022-05-24] r-bioc-genefilter 1.78.0-1 MIGRATED to testing (Debian testing watch)
  • [2022-05-16] Accepted r-bioc-genefilter 1.78.0-1 (source) into unstable (Andreas Tille)
  • [2021-12-03] r-bioc-genefilter 1.76.0-1 MIGRATED to testing (Debian testing watch)
  • [2021-11-25] Accepted r-bioc-genefilter 1.76.0-1 (source) into unstable (Andreas Tille)
  • [2021-10-21] r-bioc-genefilter 1.74.1-1 MIGRATED to testing (Debian testing watch)
  • 1
  • 2
bugs [bug history graph]
  • all: 0
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  • version: 1.88.0-3

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