r-bioc-hdf5array - Debian Package Tracker

general

source: r-bioc-hdf5array (main)
version: 1.34.0-3
maintainer: Debian R Packages Maintainers (archive) (DMD) (LowNMU)
uploaders: Charles Plessy [DMD] – Steffen Moeller [DMD]
arch: any
std-ver: 4.7.3
VCS: Git (Browse, QA)

versions [more versions can be listed by madison] [old versions available from snapshot.debian.org]

[pool directory]

o-o-stable: 1.18.1-3
oldstable: 1.26.0-1
stable: 1.34.0-2
unstable: 1.34.0-3

versioned links

1.18.1-3: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
1.26.0-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
1.34.0-2: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
1.34.0-3: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]

binaries

r-bioc-hdf5array

action needed

Debci reports failed tests high

unstable: pass (log)
The tests ran in 0:01:35
Last run: 2026-05-25T03:41:09.000Z
Previous status: unknown

testing: fail (log)
The tests ran in 0:00:23
Last run: 2025-11-26T13:19:52.000Z
Previous status: unknown

stable: pass (log)
The tests ran in 0:02:08
Last run: 2026-07-16T04:17:14.000Z
Previous status: unknown

Created: 2025-11-26 Last update: 2026-08-17 06:32

1 binary package has unsatisfiable dependencies high

The dependencies of r-bioc-hdf5array=1.34.0-3 cannot be satisfied in unstable on riscv64, amd64, arm64, and ppc64el because: unsatisfied dependency on r-api-bioc-3.20

Created: 2026-07-11 Last update: 2026-08-17 06:31

A new upstream version is available: 1.40.0 high

A new upstream version 1.40.0 is available, you should consider packaging it.

Created: 2026-07-29 Last update: 2026-08-17 04:00

The package has not entered testing even though the delay is over normal

The package has not entered testing even though the 5-day delay is over. Check why.

Created: 2026-04-13 Last update: 2026-08-17 06:31

version in VCS is newer than in repository, is it time to upload? normal

vcswatch reports that this package seems to have a new changelog entry (version 1.40.0-1, distribution UNRELEASED) and new commits in its VCS. You should consider whether it's time to make an upload.

Here are the relevant commit messages:

commit e460c51fe1bfe8c58fb98c02be94bb8de2f0d589
Author: Charles Plessy <plessy@debian.org>
Date:   Mon Aug 10 11:02:16 2026 +0900

    Architecture-dependent functions moved to r-bioc-h5mread.

commit 0b4229a8c24919dbc608ebbb64c2912866917c68
Author: Charles Plessy <plessy@debian.org>
Date:   Mon Aug 10 10:57:38 2026 +0900

    Changes made by cme

commit 930293dc2936a0831b49797b32a77d54c0197fcd
Author: Charles Plessy <plessy@debian.org>
Date:   Mon Aug 10 10:57:35 2026 +0900

    Standards-Version: 4.7.4 (routine-update)

commit 961f5ccdd34e90a2cee837cd332cad1cf22a0dc5
Merge: 5f743c4 375c50e
Author: Charles Plessy <plessy@debian.org>
Date:   Mon Aug 10 10:57:34 2026 +0900

    Update upstream source from tag 'upstream/1.40.0'
    
    Update to upstream version '1.40.0'
    with Debian dir 1c7a07128d851d718db8a1e64bd9b2daa82a1dfc

commit 5f743c47d12259392cc053d5e4514b2affce9942
Author: Charles Plessy <plessy@debian.org>
Date:   Mon Aug 10 10:57:24 2026 +0900

    New upstream version

commit 375c50e41ecfd3d859d75be54491ce3b2a7067d4
Author: Charles Plessy <plessy@debian.org>
Date:   Mon Aug 10 10:57:24 2026 +0900

    New upstream version 1.40.0

commit f4ff3047c54f536db378d68a1fa9343b39dd9c7f
Author: Charles Plessy <plessy@debian.org>
Date:   Mon Aug 10 10:57:21 2026 +0900

    Use uscan v5 $template template. (routine-update)

commit 206370461bfd0c169a0d19c7c69adc07fa34bdac
Author: Charles Plessy <plessy@debian.org>
Date:   Mon Aug 10 10:57:18 2026 +0900

    Packaging update (routine-update)

https://salsa.debian.org/api/v4/projects/r-pkg-team%2Fr-bioc-hdf5array API request failed: 401 Unauthorized at /srv/qa.debian.org/data/vcswatch/vcswatch line 410.

Created: 2026-08-10 Last update: 2026-08-16 20:01

debian/patches: 1 patch to forward upstream low

Among the 1 debian patch available in version 1.34.0-3 of the package, we noticed the following issues:

1 patch where the metadata indicates that the patch has not yet been forwarded upstream. You should either forward the patch upstream or update the metadata to document its real status.

Created: 2023-02-26 Last update: 2026-03-15 19:02

Standards version of the package is outdated. wishlist

The package should be updated to follow the last version of Debian Policy (Standards-Version 4.7.4 instead of 4.7.3).

Created: 2026-03-31 Last update: 2026-03-31 15:01

testing migrations

This package is part of the ongoing testing transition known as r-api-bioc-3.23. Please avoid uploads unrelated to this transition, they would likely delay it and require supplementary work from the release managers. On the other hand, if your package has problems preventing it to migrate to testing, please fix them as soon as possible. You can probably find supplementary information in the debian-release archives or in the corresponding release.debian.org bug.
excuses:
- Migrates after: r-bioc-biocgenerics, r-bioc-delayedarray, r-bioc-iranges, r-bioc-rhdf5, r-bioc-rhdf5filters, r-bioc-rhdf5lib, r-bioc-s4arrays, r-bioc-s4vectors, r-bioc-sparsearray
- Migration status for r-bioc-hdf5array (- to 1.34.0-3): BLOCKED: Rejected/violates migration policy/introduces a regression
- Issues preventing migration:
- ∙ ∙ r-bioc-hdf5array/amd64 has unsatisfiable dependency
- ∙ ∙ r-bioc-hdf5array/arm64 has unsatisfiable dependency
- ∙ ∙ r-bioc-hdf5array/ppc64el has unsatisfiable dependency
- ∙ ∙ r-bioc-hdf5array/riscv64 has unsatisfiable dependency
- ∙ ∙ Updating r-bioc-hdf5array would introduce bugs in testing: #1135462
- ∙ ∙ Build-Depends(-Arch): r-bioc-hdf5array r-bioc-biocgenerics (not considered)
- ∙ ∙ Build-Depends(-Arch): r-bioc-hdf5array r-bioc-delayedarray (not considered)
- ∙ ∙ Build-Depends(-Arch): r-bioc-hdf5array r-bioc-iranges (not considered)
- ∙ ∙ Build-Depends(-Arch): r-bioc-hdf5array r-bioc-rhdf5
- ∙ ∙ Build-Depends(-Arch): r-bioc-hdf5array r-bioc-rhdf5filters
- ∙ ∙ Build-Depends(-Arch): r-bioc-hdf5array r-bioc-rhdf5lib
- ∙ ∙ Build-Depends(-Arch): r-bioc-hdf5array r-bioc-s4arrays (not considered)
- ∙ ∙ Build-Depends(-Arch): r-bioc-hdf5array r-bioc-s4vectors
- ∙ ∙ Build-Depends(-Arch): r-bioc-hdf5array r-bioc-sparsearray (not considered)
- Additional info (not blocking):
- ∙ ∙ Piuparts tested OK - https://piuparts.debian.org/sid/source/r/r-bioc-hdf5array.html
- ∙ ∙ Autopkgtest skipped on amd64: not installable
- ∙ ∙ Autopkgtest skipped on arm64: not installable
- ∙ ∙ Autopkgtest skipped on ppc64el: not installable
- ∙ ∙ Reproduced on amd64 - info
- ∙ ∙ Reproduced on arm64 - info
- ∙ ∙ Reproduced on armhf - info
- ∙ ∙ Reproduced on i386 - info
- ∙ ∙ 155 days old (needed 5 days)
- Not considered

news

[rss feed]

[2026-03-15] Accepted r-bioc-hdf5array 1.34.0-3 (source) into unstable (Charles Plessy)
[2025-12-08] r-bioc-hdf5array REMOVED from testing (Debian testing watch)
[2025-01-22] r-bioc-hdf5array 1.34.0-2 MIGRATED to testing (Debian testing watch)
[2025-01-12] Accepted r-bioc-hdf5array 1.34.0-2 (source) into unstable (Michael R. Crusoe)
[2025-01-02] r-bioc-hdf5array REMOVED from testing (Debian testing watch)
[2024-11-29] Accepted r-bioc-hdf5array 1.34.0-1 (source) into experimental (Michael R. Crusoe)
[2024-10-04] r-bioc-hdf5array 1.32.1-1 MIGRATED to testing (Debian testing watch)
[2024-08-17] Accepted r-bioc-hdf5array 1.32.1-1 (source) into unstable (Michael R. Crusoe)
[2024-08-12] Accepted r-bioc-hdf5array 1.32.0-1~0exp2 (source) into experimental (Michael R. Crusoe)
[2024-07-23] Accepted r-bioc-hdf5array 1.32.0-1~0exp1 (source) into experimental (Michael R. Crusoe)
[2024-07-14] Accepted r-bioc-hdf5array 1.32.0-1~0exp (source) into experimental (Michael R. Crusoe)
[2024-06-25] r-bioc-hdf5array REMOVED from testing (Debian testing watch)
[2024-02-23] r-bioc-hdf5array 1.30.1-1 MIGRATED to testing (Debian testing watch)
[2024-02-20] Accepted r-bioc-hdf5array 1.30.1-1 (source) into unstable (Andreas Tille)
[2023-12-17] r-bioc-hdf5array 1.30.0-1 MIGRATED to testing (Debian testing watch)
[2023-11-30] Accepted r-bioc-hdf5array 1.30.0-1 (source) into unstable (Andreas Tille)
[2023-08-19] r-bioc-hdf5array 1.28.1-1 MIGRATED to testing (Debian testing watch)
[2023-07-26] Accepted r-bioc-hdf5array 1.28.1-1 (source) into unstable (Andreas Tille)
[2023-07-10] r-bioc-hdf5array REMOVED from testing (Debian testing watch)
[2022-12-05] r-bioc-hdf5array 1.26.0-1 MIGRATED to testing (Debian testing watch)
[2022-11-21] Accepted r-bioc-hdf5array 1.26.0-1 (source) into unstable (Andreas Tille)
[2022-08-09] r-bioc-hdf5array 1.24.2-1 MIGRATED to testing (Debian testing watch)
[2022-08-07] Accepted r-bioc-hdf5array 1.24.2-1 (source) into unstable (Andreas Tille)
[2022-06-09] r-bioc-hdf5array 1.24.1-1 MIGRATED to testing (Debian testing watch)
[2022-06-07] Accepted r-bioc-hdf5array 1.24.1-1 (source) into unstable (Andreas Tille)
[2022-05-24] r-bioc-hdf5array 1.24.0-1 MIGRATED to testing (Debian testing watch)
[2022-05-14] Accepted r-bioc-hdf5array 1.24.0-1 (source) into unstable (Andreas Tille)
[2021-12-03] r-bioc-hdf5array 1.22.1-1 MIGRATED to testing (Debian testing watch)
[2021-11-25] Accepted r-bioc-hdf5array 1.22.1-1 (source) into unstable (Andreas Tille)
[2021-09-29] r-bioc-hdf5array 1.20.0-2 MIGRATED to testing (Debian testing watch)

bugs [bug history graph]

all: 1
RC: 1
I&N: 0
M&W: 0
F&P: 0
patch: 0

links

homepage
lintian
buildd: logs, debcheck, cross
popcon
browse source code
other distros
debian patches
debci

ubuntu

[Information about Ubuntu for Debian Developers]

version: 1.34.0-3