-----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 1.8 Date: Fri, 19 Nov 2021 00:22:37 +0100 Source: phyml Architecture: source Version: 3:3.3.20211021-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org> Changed-By: Étienne Mollier <emollier@debian.org> Changes: phyml (3:3.3.20211021-1) unstable; urgency=medium . * New upstream version. * Refresh most patches. * Add apply-cflags.patch: ensure standard Debian CFLAGS are propagated throughout the build process. * Add filter-sse3-intrinsics.patch: fixes FTBFS when built with -msse but without -msse3, as the codebase also now includes SSE3 instructions; however this means that SSE acceleration is thus now disabled on amd64. * Add apply-ldflags.patch: ensure standard Debian LDFLAGS are propagated throughout the build process for proper hardening. * d/rules: autoconfigure with --enable-phyml-mpi, replacing --enable-mpi. * d/rules: fix permissions of example files nucleic and proteic. * d/{links,phyml.1}: also provide phyml-mpi manual page. * d/control: add myself to Uploaders. * d/copyright: bump project to GPL-3 and document the file src/mxml.h * d/copyright: update copyright entry of package maintenance Checksums-Sha1: cf8a61dee1f68ba7b3046c4ae5fa80f2ec81bf49 2138 phyml_3.3.20211021-1.dsc 3aaeeee99a730a06b84808582fc5434f5e502a2c 1802071 phyml_3.3.20211021.orig.tar.gz f7dfac21a22ff2641496823020580b553cf63c35 20624 phyml_3.3.20211021-1.debian.tar.xz dd7ffa74c64ff79c5390456e5f0b736a3940e670 7657 phyml_3.3.20211021-1_amd64.buildinfo Checksums-Sha256: d44bcec424bb82635a01b9c4a152e86f3bb1cc0182b6131b284ad2a4c26068eb 2138 phyml_3.3.20211021-1.dsc 8dd6519ccbf73ce67e57bc7681f6dffdbbc63e78e15aae79394f3ec362d42c2d 1802071 phyml_3.3.20211021.orig.tar.gz d0742cebf4095013bd842a69f75c30a915d46445f16000733ccc7293aa0e2194 20624 phyml_3.3.20211021-1.debian.tar.xz 5579ca7a4b98df1dbc95f3d64ebfd00bf18113ab9833645d6dc4cf5b54d94c5d 7657 phyml_3.3.20211021-1_amd64.buildinfo Files: 5486c5ac4b0c28b2ef4980fbd7d646a0 2138 science optional phyml_3.3.20211021-1.dsc 99e736f8726870c3ea2e40cf9e6222a4 1802071 science optional phyml_3.3.20211021.orig.tar.gz 3cc15620d34e3741bc6643854c41e55b 20624 science optional phyml_3.3.20211021-1.debian.tar.xz ea427e77e132a72c7fde70f3c7331e4d 7657 science optional phyml_3.3.20211021-1_amd64.buildinfo -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmGW7soUHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdqi+w/+K2Dq0ipZtEThs79sI6TAZY9TGdsh DT/1Sdfp3FgmoBgvB08L60hMue/aN8+S3e+/9rOynwG+clzfE6/jzmt9jPmhXSRD XvZ1zL+s8j18xkCnmfQ4yXAb9enHtoHd7jGm7DoCUBdRKQJL+nMcVHZc3+9GOyWH 56dlMCvGdiLAYu0GcOcQwoKFB7haHdiNAY4DssBaHZ7eDIBnXdNz9ccVH+EZ9QQX 3oe1iXF/sfbdGrc8p+/J56v9GrgRJb66rvMGa5/q2AkcT8IUnbAKB9Ga8GhYqBcd C9RkKCBAyDeAXOIFo7+4Kq951EyjL+PZRURQXxJUk7mryhbQsILceUEMxRJG2uYU LuHj/xnXIVzz5RXHFAv0BB291alccy0ry34Foj3XGwOj0uQiv6qivw70skb8vkw6 wsCWtCsLyEr4hNLe1WuU7+YAdOiDXvbPyXDHwEMEDhC25tmTJTrMak6x9aPg1mtu XknOwOcOX8WsSVj7rj+wfQtv38hKjOLUUPYz4odu+ZQXI+YrUSB7UpzbVR99nnAu W94NcZ4/B6SrVqdvtQl9jM9cKnZjUPs3mCS+Z/i8PcwH/OeYJNo9dY9bdIM/B+2+ y5kkIF5LSXjlJRtK6p2mZ9KFxVu+pT/81TJZrJOd6VMXeOAMH4lEstyyC9cpIdKy Foel4looQh0SIzE= =kI5a -----END PGP SIGNATURE-----