-----BEGIN PGP SIGNED MESSAGE----- Hash: SHA1 Format: 1.8 Date: Fri, 23 Jan 2009 22:19:50 +0900 Source: python-biopython Binary: python-biopython python-biopython-doc python-biopython-sql python-biopython-martel Architecture: source all powerpc Version: 1.49-1 Distribution: unstable Urgency: low Maintainer: Debian-Med Packaging Team <debian-med-packaging@lists.alioth.debian.org> Changed-By: Charles Plessy <plessy@debian.org> Description: python-biopython - Python library for bioinformatics python-biopython-doc - Documentation for the Biopython library python-biopython-martel - Flat file parser for the Biopython library python-biopython-sql - SQL support for the Biopython library Closes: 478457 Changes: python-biopython (1.49-1) unstable; urgency=low . * New upstream release. - uses NumPy rather than its precursor Numeric (Closes: #478457) - Martel, Bio.Mindy, Bio.MetaTool, Bio.EUtils, Bio.Saf, Bio.NBRF, and Bio.IntelliGenetics are deprecated. - Bio.PubMed and the online code in Bio.GenBank are now considered obsolete and will be deprecated in a future release. - Bio.Fasta is also considered to be obsolete and will eventually be deprecated. * debian/control: - added myself as Uploader. - depends on python-numpy instead of python-numeric-ext. - moved python-martel to oldlibs section, priority extra as it is deprecated, and indicate this in the description. - build-depend on python-mysqldb and wise for the tests after building. * Use Debhelper 7 (debian/co{ntrol,mpat}). * debian/copyright: added myself to the Hall of Fame and updated to latest draft of the machine-readable format. * debian/watch: makes beta versions lower by prepending a tilde between numbers and letters (1.49b -> 1.49~b). * mmCIF support enabled: - debian/patches/01-enable-mmCIF.patch: as the name indicates ;) - debian/rules: patch and unpatch through /usr/share/quilt/quilt.make. - debian/control: build-depends on quilt. * debian/python-biopython-doc.doc-base: corrected index name that was changed upstream. * debian/patches/02-fix-wise-test.patch: prevents tests failing with Debian's version of Wise. * debian/rules: perform tests after build. 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