Register | Log in

bowtie2

ultrafast memory-efficient short read aligner

Choose email to subscribe with

general

source: bowtie2 (main)
version: 2.3.5.1-6
maintainer: Debian Med Packaging Team (archive) (DMD) (LowNMU)
uploaders: Alexandre Mestiashvili [DMD] – Andreas Tille [DMD]
arch: all any
std-ver: 4.4.1
VCS: Git (Browse, QA)

versions [more versions can be listed by madison] [old versions available from snapshot.debian.org]

[pool directory]

o-o-stable: 2.2.4-1
oldstable: 2.3.0-2
stable: 2.3.4.3-1
testing: 2.3.5.1-6
unstable: 2.3.5.1-6

versioned links

2.2.4-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
2.3.0-2: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
2.3.4.3-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
2.3.5.1-6: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]

binaries

bowtie2
bowtie2-examples

action needed

version in VCS is newer than in repository, is it time to upload? normal

vcswatch reports that this package seems to have a new changelog entry (version 2.3.5.1-7, distribution UNRELEASED) and new commits in its VCS. You should consider whether it's time to make an upload.

Here are the relevant commit messages:

commit 0ab5ce6d0cfdef1c1d068eb0c16d7b5229cadb94
Author: Michael R. Crusoe <michael.crusoe@gmail.com>
Date:   Fri Dec 20 09:39:49 2019 -0800

    update SIMDe to 2019-12-20 37c74d3

commit a3cf4c555e5b10d89ca174a3cfa447e1dc563177
Author: Michael R. Crusoe <michael.crusoe@gmail.com>
Date:   Thu Dec 19 11:54:27 2019 -0800

    skip 32bit archs to waste less energy; patches to fix 32-bit are welcome!

Created: 2019-12-19 Last update: 2020-01-16 17:04

Standards version of the package is outdated. wishlist

The package should be updated to follow the last version of Debian Policy (Standards-Version 4.5.0 instead of 4.4.1).

Created: 2020-01-21 Last update: 2020-01-21 05:06

news

[2019-12-22] bowtie2 2.3.5.1-6 MIGRATED to testing (Debian testing watch)
[2019-12-19] Accepted bowtie2 2.3.5.1-6 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
[2019-12-18] Accepted bowtie2 2.3.5.1-5 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
[2019-12-18] Accepted bowtie2 2.3.5.1-4 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
[2019-12-16] Accepted bowtie2 2.3.5.1-3 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
[2019-12-12] bowtie2 2.3.5.1-2 MIGRATED to testing (Debian testing watch)
[2019-12-07] Accepted bowtie2 2.3.5.1-2 (source) into unstable (Alexandre Mestiashvili)
[2019-09-08] bowtie2 2.3.5.1-1 MIGRATED to testing (Debian testing watch)
[2019-09-05] Accepted bowtie2 2.3.5.1-1 (source) into unstable (Alexandre Mestiashvili)
[2018-09-27] bowtie2 2.3.4.3-1 MIGRATED to testing (Debian testing watch)
[2018-09-25] Accepted bowtie2 2.3.4.3-1 (source amd64 all) into unstable (Alexandre Mestiashvili)
[2018-08-16] bowtie2 2.3.4.2-1 MIGRATED to testing (Debian testing watch)
[2018-08-14] Accepted bowtie2 2.3.4.2-1 (source amd64 all) into unstable (Alexandre Mestiashvili)
[2018-06-15] bowtie2 2.3.4.1-2 MIGRATED to testing (Debian testing watch)
[2018-06-12] Accepted bowtie2 2.3.4.1-2 (source) into unstable (Liubov Chuprikova) (signed by: Andreas Tille)
[2018-02-13] bowtie2 2.3.4.1-1 MIGRATED to testing (Debian testing watch)
[2018-02-07] Accepted bowtie2 2.3.4.1-1 (source amd64 all) into unstable (Alexandre Mestiashvili)
[2018-01-12] bowtie2 2.3.4-1 MIGRATED to testing (Debian testing watch)
[2018-01-06] Accepted bowtie2 2.3.4-1 (source amd64 all) into unstable (Alexandre Mestiashvili)
[2017-10-19] bowtie2 2.3.3.1-1 MIGRATED to testing (Debian testing watch)
[2017-10-13] Accepted bowtie2 2.3.3.1-1 (source amd64 all) into unstable (Alexandre Mestiashvili)
[2017-09-16] bowtie2 2.3.3-1 MIGRATED to testing (Debian testing watch)
[2017-09-11] Accepted bowtie2 2.3.3-1 (source amd64 all) into unstable (Alexandre Mestiashvili)
[2017-08-02] bowtie2 2.3.2-2 MIGRATED to testing (Debian testing watch)
[2017-07-27] Accepted bowtie2 2.3.2-2 (source amd64 all) into unstable (Alexandre Mestiashvili)
[2017-06-20] bowtie2 2.3.1-1 MIGRATED to testing (Debian testing watch)
[2017-06-09] Accepted bowtie2 2.3.0-2~bpo8+1 (source amd64 all) into jessie-backports->backports-policy, jessie-backports (Andreas Tille)
[2017-05-24] Accepted bowtie2 2.3.2-1 (source amd64 all) into experimental (Alexandre Mestiashvili)
[2017-03-08] Accepted bowtie2 2.3.1-1 (source amd64 all) into unstable (Alexandre Mestiashvili)
[2017-02-05] bowtie2 2.3.0-2 MIGRATED to testing (Debian testing watch)

1
2

bugs [bug history graph]

all: 0

links

homepage
buildd: logs, clang, reproducibility, cross
popcon
browse source code
edit tags
screenshots
debci

ubuntu

[Information about Ubuntu for Debian Developers]

version: 2.3.5.1-6

Debian Package Tracker — Copyright 2013-2018 The Distro Tracker Developers

Report problems to the tracker.debian.org pseudo-package in the Debian BTS.

Documentation — Bugs — Git Repository — Contributing