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bowtie2

ultrafast memory-efficient short read aligner

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general

source: bowtie2 (main)
version: 2.5.1-1
maintainer: Debian Med Packaging Team (archive) (DMD) (LowNMU)
uploaders: Andreas Tille [DMD] – Alexandre Mestiashvili [DMD]
arch: all arm64 ia64 m68k mips64el ppc64 ppc64el sh4 sparc64
std-ver: 4.6.2
VCS: Git (Browse, QA)

versions [more versions can be listed by madison] [old versions available from snapshot.debian.org]

[pool directory]

o-o-stable: 2.3.4.3-1
oldstable: 2.4.2-2
stable: 2.5.0-3
testing: 2.5.1-1
unstable: 2.5.1-1

versioned links

2.3.4.3-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
2.4.2-2: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
2.5.0-3: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
2.5.1-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]

binaries

bowtie2
bowtie2-examples

action needed

Debci reports failed tests high

unstable: fail (log)
The tests ran in 0:02:11
Last run: 2023-09-12T23:04:16.000Z
Previous status: pass

testing: pass (log)
The tests ran in 0:00:31
Last run: 2023-09-13T12:18:31.000Z
Previous status: pass

stable: pass (log)
The tests ran in 0:00:21
Last run: 2023-09-19T04:26:09.000Z
Previous status: pass

Created: 2023-09-12 Last update: 2023-09-23 13:19

debian/patches: 2 patches to forward upstream low

Among the 10 debian patches available in version 2.5.1-1 of the package, we noticed the following issues:

2 patches where the metadata indicates that the patch has not yet been forwarded upstream. You should either forward the patch upstream or update the metadata to document its real status.

Created: 2023-02-26 Last update: 2023-09-12 18:59

news

[2023-09-14] bowtie2 2.5.1-1 MIGRATED to testing (Debian testing watch)
[2023-09-12] Accepted bowtie2 2.5.1-1 (source) into unstable (Michael R. Crusoe)
[2023-01-23] bowtie2 2.5.0-3 MIGRATED to testing (Debian testing watch)
[2023-01-22] Accepted bowtie2 2.5.0-4~0exp (source) into experimental (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
[2023-01-17] Accepted bowtie2 2.5.0-3 (source) into unstable (Andreas Tille)
[2022-12-12] Accepted bowtie2 2.5.0-2 (source) into unstable (Andreas Tille)
[2022-11-05] Accepted bowtie2 2.5.0-1 (source) into unstable (Étienne Mollier)
[2022-03-16] bowtie2 2.4.5-1 MIGRATED to testing (Debian testing watch)
[2022-02-17] Accepted bowtie2 2.4.5-1 (source) into unstable (Andreas Tille)
[2021-09-22] bowtie2 2.4.4-1 MIGRATED to testing (Debian testing watch)
[2021-09-13] Accepted bowtie2 2.4.4-1 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
[2020-12-26] Accepted bowtie2 2.4.2-3~0exp0simde (source) into experimental (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
[2020-12-21] bowtie2 2.4.2-2 MIGRATED to testing (Debian testing watch)
[2020-12-21] bowtie2 2.4.2-2 MIGRATED to testing (Debian testing watch)
[2020-12-15] Accepted bowtie2 2.4.2-2 (source) into unstable (Andreas Tille)
[2020-12-10] Accepted bowtie2 2.4.2-2~0exp0simde (source) into experimental (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
[2020-10-13] bowtie2 2.4.2-1 MIGRATED to testing (Debian testing watch)
[2020-10-07] Accepted bowtie2 2.4.2-1 (source) into unstable (Alexandre Mestiashvili)
[2020-06-04] bowtie2 2.4.1-6 MIGRATED to testing (Debian testing watch)
[2020-06-01] Accepted bowtie2 2.4.1-6 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
[2020-05-25] Accepted bowtie2 2.4.1-5 (source) into unstable (Andreas Tille)
[2020-04-24] bowtie2 2.4.1-4 MIGRATED to testing (Debian testing watch)
[2020-04-21] Accepted bowtie2 2.4.1-4 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
[2020-04-21] bowtie2 2.4.1-2 MIGRATED to testing (Debian testing watch)
[2020-04-19] Accepted bowtie2 2.4.1-2 (source) into unstable (Alexandre Mestiashvili)
[2020-04-06] bowtie2 2.4.1-1 MIGRATED to testing (Debian testing watch)
[2020-04-04] Accepted bowtie2 2.4.1-1 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
[2019-12-22] bowtie2 2.3.5.1-6 MIGRATED to testing (Debian testing watch)
[2019-12-19] Accepted bowtie2 2.3.5.1-6 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
[2019-12-18] Accepted bowtie2 2.3.5.1-5 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)

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bugs [bug history graph]

all: 0

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ubuntu

[Information about Ubuntu for Debian Developers]

version: 2.5.0-3

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