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bowtie2

ultrafast memory-efficient short read aligner

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general
  • source: bowtie2 (main)
  • version: 2.4.2-2
  • maintainer: Debian Med Packaging Team (archive) (DMD) (LowNMU)
  • uploaders: Alexandre Mestiashvili [DMD] – Andreas Tille [DMD]
  • arch: all arm64 ia64 m68k mips64el ppc64 ppc64el s390x sh4 sparc64
  • std-ver: 4.5.1
  • VCS: Git (Browse, QA)
versions [more versions can be listed by madison] [old versions available from snapshot.debian.org]
[pool directory]
  • oldstable: 2.3.0-2
  • stable: 2.3.4.3-1
  • testing: 2.4.2-2
  • unstable: 2.4.2-2
  • exp: 2.4.2-3~0exp0simde
versioned links
  • 2.3.0-2: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
  • 2.3.4.3-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
  • 2.4.2-2: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
  • 2.4.2-3~0exp0simde: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
binaries
  • bowtie2
  • bowtie2-examples
action needed
Problems while searching for a new upstream version high
uscan had problems while searching for a new upstream version:
In debian/watch no matching files for watch line
  https://github.com/BenLangmead/bowtie2/releases .*/archive/v(\d[\d.-]+)\.(?:tar(?:\.gz|\.bz2)?|tgz)
Created: 2021-03-22 Last update: 2021-04-14 16:04
The VCS repository is not up to date, push the missing commits. high
vcswatch reports that the current version of the package is not in its VCS.
Either you need to push your commits and/or your tags, or the information about the package's VCS are out of date. A common cause of the latter issue when using the Git VCS is not specifying the correct branch when the packaging is not in the default one (remote HEAD branch), which is usually "master" but can be modified in salsa.debian.org in the project's general settings with the "Default Branch" field). Alternatively the Vcs-Git field in debian/control can contain a "-b <branch-name>" suffix to indicate what branch is used for the Debian packaging.
Created: 2020-12-26 Last update: 2021-04-11 10:40
lintian reports 1 warning normal
Lintian reports 1 warning about this package. You should make the package lintian clean getting rid of them.
Created: 2021-01-27 Last update: 2021-01-27 03:01
news
[rss feed]
  • [2020-12-26] Accepted bowtie2 2.4.2-3~0exp0simde (source) into experimental (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
  • [2020-12-21] bowtie2 2.4.2-2 MIGRATED to testing (Debian testing watch)
  • [2020-12-21] bowtie2 2.4.2-2 MIGRATED to testing (Debian testing watch)
  • [2020-12-15] Accepted bowtie2 2.4.2-2 (source) into unstable (Andreas Tille)
  • [2020-12-10] Accepted bowtie2 2.4.2-2~0exp0simde (source) into experimental (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
  • [2020-10-13] bowtie2 2.4.2-1 MIGRATED to testing (Debian testing watch)
  • [2020-10-07] Accepted bowtie2 2.4.2-1 (source) into unstable (Alexandre Mestiashvili)
  • [2020-06-04] bowtie2 2.4.1-6 MIGRATED to testing (Debian testing watch)
  • [2020-06-01] Accepted bowtie2 2.4.1-6 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
  • [2020-05-25] Accepted bowtie2 2.4.1-5 (source) into unstable (Andreas Tille)
  • [2020-04-24] bowtie2 2.4.1-4 MIGRATED to testing (Debian testing watch)
  • [2020-04-21] Accepted bowtie2 2.4.1-4 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
  • [2020-04-21] bowtie2 2.4.1-2 MIGRATED to testing (Debian testing watch)
  • [2020-04-19] Accepted bowtie2 2.4.1-2 (source) into unstable (Alexandre Mestiashvili)
  • [2020-04-06] bowtie2 2.4.1-1 MIGRATED to testing (Debian testing watch)
  • [2020-04-04] Accepted bowtie2 2.4.1-1 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
  • [2019-12-22] bowtie2 2.3.5.1-6 MIGRATED to testing (Debian testing watch)
  • [2019-12-19] Accepted bowtie2 2.3.5.1-6 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
  • [2019-12-18] Accepted bowtie2 2.3.5.1-5 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
  • [2019-12-18] Accepted bowtie2 2.3.5.1-4 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
  • [2019-12-16] Accepted bowtie2 2.3.5.1-3 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
  • [2019-12-12] bowtie2 2.3.5.1-2 MIGRATED to testing (Debian testing watch)
  • [2019-12-07] Accepted bowtie2 2.3.5.1-2 (source) into unstable (Alexandre Mestiashvili)
  • [2019-09-08] bowtie2 2.3.5.1-1 MIGRATED to testing (Debian testing watch)
  • [2019-09-05] Accepted bowtie2 2.3.5.1-1 (source) into unstable (Alexandre Mestiashvili)
  • [2018-09-27] bowtie2 2.3.4.3-1 MIGRATED to testing (Debian testing watch)
  • [2018-09-25] Accepted bowtie2 2.3.4.3-1 (source amd64 all) into unstable (Alexandre Mestiashvili)
  • [2018-08-16] bowtie2 2.3.4.2-1 MIGRATED to testing (Debian testing watch)
  • [2018-08-14] Accepted bowtie2 2.3.4.2-1 (source amd64 all) into unstable (Alexandre Mestiashvili)
  • [2018-06-15] bowtie2 2.3.4.1-2 MIGRATED to testing (Debian testing watch)
  • 1
  • 2
bugs [bug history graph]
  • all: 0
links
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  • version: 2.4.2-2

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