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hmmer

profile hidden Markov models for protein sequence analysis

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general
  • source: hmmer (main)
  • version: 3.4+dfsg-3
  • maintainer: Debian Med Packaging Team (archive) (DMD) (LowNMU)
  • uploaders: Andreas Tille [DMD]
  • arch: all any
  • std-ver: 4.7.2
  • VCS: Git (Browse, QA)
versions [more versions can be listed by madison] [old versions available from snapshot.debian.org]
[pool directory]
  • o-o-stable: 3.3.2+dfsg-1
  • oldstable: 3.3.2+dfsg-1
  • stable: 3.4+dfsg-2
  • testing: 3.4+dfsg-2
  • unstable: 3.4+dfsg-3
versioned links
  • 3.3.2+dfsg-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
  • 3.4+dfsg-2: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
  • 3.4+dfsg-3: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
binaries
  • hmmer
  • hmmer-doc
  • hmmer-examples
action needed
Marked for autoremoval on 26 October due to libdivsufsort: #1113140 high
Version 3.4+dfsg-2 of hmmer is marked for autoremoval from testing on Sun 26 Oct 2025. It depends (transitively) on libdivsufsort, affected by #1113140. You should try to prevent the removal by fixing these RC bugs.
Created: 2025-09-26 Last update: 2025-09-30 09:00
Does not build reproducibly during testing normal
A package building reproducibly enables third parties to verify that the source matches the distributed binaries. It has been identified that this source package produced different results, failed to build or had other issues in a test environment. Please read about how to improve the situation!
Created: 2019-10-13 Last update: 2025-09-30 09:32
lintian reports 7 warnings normal
Lintian reports 7 warnings about this package. You should make the package lintian clean getting rid of them.
Created: 2025-09-30 Last update: 2025-09-30 03:00
testing migrations
  • excuses:
    • Migration status for hmmer (3.4+dfsg-2 to 3.4+dfsg-3): Waiting for test results or another package, or too young (no action required now - check later)
    • Issues preventing migration:
    • ∙ ∙ Too young, only 1 of 5 days old
    • Additional info:
    • ∙ ∙ Piuparts tested OK - https://piuparts.debian.org/sid/source/h/hmmer.html
    • ∙ ∙ autopkgtest for hmmer/3.4+dfsg-3: amd64: Pass, arm64: Failed (not a regression) ♻ (reference ♻), i386: Failed (not a regression) ♻ (reference ♻)
    • ∙ ∙ Waiting for reproducibility test results on amd64 - info ♻
    • ∙ ∙ Waiting for reproducibility test results on arm64 - info ♻
    • Not considered
news
[rss feed]
  • [2025-09-29] Accepted hmmer 3.4+dfsg-3 (source) into unstable (Santiago Vila)
  • [2023-09-20] hmmer 3.4+dfsg-2 MIGRATED to testing (Debian testing watch)
  • [2023-09-15] Accepted hmmer 3.4+dfsg-2 (source) into unstable (Michael R. Crusoe)
  • [2023-09-14] Accepted hmmer 3.4+dfsg-1 (source) into unstable (Michael R. Crusoe)
  • [2021-01-05] hmmer 3.3.2+dfsg-1 MIGRATED to testing (Debian testing watch)
  • [2020-12-31] Accepted hmmer 3.3.2+dfsg-1 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
  • [2019-12-09] hmmer 3.3+dfsg2-1 MIGRATED to testing (Debian testing watch)
  • [2019-12-04] Accepted hmmer 3.3+dfsg2-1 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
  • [2019-11-22] Accepted hmmer 3.3+dfsg-1 (source) into unstable (Steffen Moeller)
  • [2019-10-10] hmmer 3.2.1+dfsg-3 MIGRATED to testing (Debian testing watch)
  • [2019-10-08] Accepted hmmer 3.2.1+dfsg-3 (source) into unstable (Michael R. Crusoe) (signed by: Andreas Tille)
  • [2019-09-24] Accepted hmmer 3.2.1+dfsg-2 (source) into unstable (Andrius Merkys) (signed by: Steffen Moeller)
  • [2018-08-26] hmmer 3.2.1+dfsg-1 MIGRATED to testing (Debian testing watch)
  • [2018-08-24] Accepted hmmer 3.2.1+dfsg-1 (source) into unstable (Andreas Tille)
  • [2017-01-31] hmmer 3.1b2+dfsg-5 MIGRATED to testing (Debian testing watch)
  • [2017-01-20] Accepted hmmer 3.1b2+dfsg-5 (source amd64 all) into unstable (Andreas Tille)
  • [2016-09-15] hmmer 3.1b2+dfsg-3 MIGRATED to testing (Debian testing watch)
  • [2016-09-09] Accepted hmmer 3.1b2+dfsg-3 (source amd64 all) into unstable (Sascha Steinbiss)
  • [2016-07-13] hmmer 3.1b2+dfsg-2 MIGRATED to testing (Debian testing watch)
  • [2016-07-07] Accepted hmmer 3.1b2+dfsg-2 (source) into unstable (Andreas Tille)
  • [2016-07-06] Accepted hmmer 3.1b2+dfsg-1 (source amd64 all) into unstable, unstable (Canberk Koç) (signed by: Andreas Tille)
  • [2015-12-28] hmmer 3.1b2-2 MIGRATED to testing (Debian testing watch)
  • [2015-12-02] Accepted hmmer 3.1b2-2 (source all amd64) into unstable (Andreas Tille)
  • [2015-07-11] hmmer 3.1b2-1 MIGRATED to testing (Britney)
  • [2015-07-05] Accepted hmmer 3.1b2-1 (source all amd64) into unstable (Andreas Tille)
  • [2013-12-13] hmmer 3.1b1-3 MIGRATED to testing (Debian testing watch)
  • [2013-12-02] Accepted hmmer 3.1b1-3 (source amd64 all) (Andreas Tille)
  • [2013-10-24] Accepted hmmer 3.1b1-2 (source amd64 all) (Andreas Tille)
  • [2013-08-15] Accepted hmmer 3.1b1-1 (source amd64 all) (Andreas Tille)
  • [2012-05-11] hmmer 3.0-4 MIGRATED to testing (Debian testing watch)
  • 1
  • 2
bugs [bug history graph]
  • all: 0
links
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  • version: 3.4+dfsg-2

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