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minexpert2

MS^n mass spectrometric data visualization and mining (runtime)

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general
  • source: minexpert2 (main)
  • version: 8.2.0-1
  • maintainer: The Debichem Group (archive) (DMD)
  • uploaders: Filippo Rusconi [DMD]
  • arch: all any
  • std-ver: 4.6.0
  • VCS: Git (Browse, QA)
versions [more versions can be listed by madison] [old versions available from snapshot.debian.org]
[pool directory]
  • stable: 7.4.1-1
  • testing: 8.2.0-1
  • unstable: 8.2.0-1
versioned links
  • 7.4.1-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
  • 8.2.0-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
binaries
  • minexpert2
  • minexpert2-doc
action needed
Does not build reproducibly during testing normal
A package building reproducibly enables third parties to verify that the source matches the distributed binaries. It has been identified that this source package produced different results, failed to build or had other issues in a test environment. Please read about how to improve the situation!
Created: 2022-02-13 Last update: 2022-05-27 19:33
53 new commits since last upload, is it time to release? normal
vcswatch reports that this package seems to have new commits in its VCS but has not yet updated debian/changelog. You should consider updating the Debian changelog and uploading this new version into the archive.

Here are the relevant commit logs:
commit 9c0d242daccac38f02552e22dca3fa9d8fdb5ea0
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Tue Feb 1 11:54:07 2022 +0100

    Add note about abandoning MathML stuff.

commit e3b195e3d2a2cf9880f75a5064cb1dbfa1a6e75e
Merge: ce4f014f e3907423
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Tue Feb 1 11:42:57 2022 +0100

    Update upstream source from tag 'upstream/8.2.0'
    
    Update to upstream version '8.2.0'
    with Debian dir e1f53046705c018b7d5fb5a2795cc6157eaaae51

commit e3907423ea906da0f4d26bb492d6dce40b6ed0f7
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Tue Feb 1 11:40:57 2022 +0100

    New upstream version 8.2.0

commit ce4f014fae376f99831df97723a3bc1b7744647c
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Tue Feb 1 11:14:32 2022 +0100

    Continue removing unused packages that were intially intended to render MathML in PDF and HTML.

commit c2e609ea49b5b97d7f1b86aea55d913bb7ab5697
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Tue Feb 1 11:13:50 2022 +0100

    Add some more history with new publication.

commit 4ae641c4829859723ed1512d1c2aa3594c41f89c
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Tue Feb 1 11:13:34 2022 +0100

    Make sane build default.

commit e02c92d72bf70aa7e60acae89e488f6aa67c88ab
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Tue Feb 1 10:38:24 2022 +0100

    Remove the docbook-mathml dependency and add the docbook-xml one.

commit 3265dcf347d3618ae93f8ea36a3fc5e061db2fc4
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Tue Feb 1 10:35:04 2022 +0100

    Remove docbook-mathml from the packages required to build the user manual.

commit 8acad60f7c405f0e6d1fadd6fbbdfd506620e93a
Merge: 2c574e4f 86c97856
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Mon Jan 31 17:49:41 2022 +0100

    Update upstream source from tag 'upstream/8.2.0'
    
    Update to upstream version '8.2.0'
    with Debian dir 797f68d2fe3d8a58d2954e0280f04ad50400e1ab

commit 86c97856324b8c127c37a2b75f871eb34b49370e
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Mon Jan 31 17:47:42 2022 +0100

    New upstream version 8.2.0

commit 2c574e4f3021f68f40ac08df94a81b5a100ddadb
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Mon Jan 31 17:36:08 2022 +0100

    Update release distrib to unstable.

commit b9a197fdf76fba9c7d078358f3ef92e1abfc267c
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Mon Jan 31 17:35:20 2022 +0100

    Update the deps on libpappsomspp.

commit 5c7787676a3ab30bb2aa265c616df1755da8d33c
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Mon Jan 31 15:53:37 2022 +0100

    Set to UNRELEASED the current 8.2.0 version.

commit d89d403f1fc595b48d51b6a4d37ffccf99a3f6c5
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Mon Jan 31 15:53:11 2022 +0100

    Update the user manual with better screen dumps to illustrate the low intensity signal removal filter.

commit 069d3a3111574978cf9fe6a7b23b06c1f4e46701
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Mon Jan 31 15:48:17 2022 +0100

    Remove non efficient filter from the menu.

commit a6360e3a7f52ac3e60ed9c0d54328a4ca325544c
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Mon Jan 31 14:42:42 2022 +0100

    Fix typo.

commit edb20c2095a12ddcb5e9b5953e745e5a3bd17a66
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Mon Jan 31 11:26:06 2022 +0100

    Add .ycm_extra_conf.py to .gitignore.

commit a3314791adff7c78175b4d1d01a6f883850691aa
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Wed Dec 8 17:30:23 2021 +0100

    Improve the build system when the libraries to be used are local and not system-wide.

commit 07776405ec00fee0c1f4e8b84a7e113db30fa754
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Wed Dec 8 17:29:20 2021 +0100

    Add a user-specific CMake build file.

commit 19b66b803263c947a71e1e8a718a57dcb8deec0e
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Mon Nov 29 18:16:42 2021 +0100

    Remove compile_commands.json from the revision system.

commit e159ab8471b34bd766c08a822421e7bf9e89e59d
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Mon Nov 29 18:15:23 2021 +0100

    New ms file reader that computes the TIC chromatogram. Work in progress. Will that file last long?

commit 40c2a418b97e6caebcb793472e197a62798cbf88
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Mon Nov 29 18:14:08 2021 +0100

    Add one file.

commit cf8e9888df2dc23eb6a96321de6af23f5d16b315
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Mon Nov 29 18:13:42 2021 +0100

    Improve the LOCAL_DEV paradigm to use the locally-built pappsomspp libs.

commit 4a6ba2447ec3b06546e1ffd6542e4bcfc9ba2d33
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Tue Nov 23 18:33:26 2021 +0100

    Fix out-of-bounds error when freeing array of arrays of doubles.

commit f3ea412d58138243c8a8bf1dea22a7c037a112c4
Merge: 685e0c8d b0195304
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Fri Nov 19 17:45:21 2021 +0100

    Update upstream source from tag 'upstream/8.2.0'
    
    Update to upstream version '8.2.0'
    with Debian dir 5a0c91772011d56d71c9107c4281000658745e5e

commit b01953047f51f907ad252336e5cbaf8a52b8e48e
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Fri Nov 19 17:43:29 2021 +0100

    New upstream version 8.2.0

commit 685e0c8d12967015221659bac42268650afe0fa4
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Fri Nov 19 17:42:28 2021 +0100

    Fix path to the user manual file.

commit 9c6c68a3f00a912d4fd8cd75251643f095411d5f
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Fri Nov 19 17:31:56 2021 +0100

    Fix DC file name (user manual).

commit 2d8d1de50edad1cf53572ed606cbc1f2520ab692
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Fri Nov 19 17:24:07 2021 +0100

    Update Standards version to 4.6.0.

commit 0f89e091b6308a32814177f9c20931cd4a378c62
Merge: e489a251 418f76cc
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Fri Nov 19 17:22:22 2021 +0100

    Update upstream source from tag 'upstream/8.2.0'
    
    Update to upstream version '8.2.0'
    with Debian dir 740f9dcf1c7cef1f2adb88772f5098e8cd86d14e

commit 418f76cc09d25d9677d9f01c8b5347c877b8205f
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Fri Nov 19 17:20:26 2021 +0100

    New upstream version 8.2.0

commit e489a25159046992b4a7edbc7f3d70d333d20e13
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Fri Nov 19 17:20:10 2021 +0100

    Preparing new package version 8.2.0-1.

commit c3add6a73657fafdfc6fefc7c34aeda998803614
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Fri Nov 19 17:17:05 2021 +0100

    Add new section to the user manual
    
    The section documents the new low intensity threshold removal from traces.

commit 78a31c84d5d620c79972d5123df5ad4d81591ace
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Fri Nov 19 17:15:42 2021 +0100

    Preparing new upstream version 8.2.0.

commit c2fa2139e1cd7abbda503f729b987af214ef1de9
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Sun Nov 7 19:07:11 2021 +0100

    New version of the watch file that points to the GitLab repos.

commit 2557c7a3bf2bea735429fa61ee3765efb7b4e8f8
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Fri Oct 22 11:15:43 2021 +0200

    Add possibility to draw a ruler over all the composite plot widget of a plot window to control if peaks are at the same position.

commit 695ceb92d95a2e8fc7447ff8395a82b2a4ac8ff5
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Fri Oct 22 11:14:45 2021 +0200

    Handle a user-provided sample noise trace.

commit d32a01bcbbeee07736baf87275a6e2143ecb53d2
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Fri Oct 22 11:13:37 2021 +0200

    Comment out debug messages.

commit 7466e00ed59190228fc58038ddfdd6b63ffd6f74
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Fri Oct 22 11:13:03 2021 +0200

    Started the sample noise removal code.

commit 5d15477d6ab529cbe1adf716277acd954aeae2a6
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Mon Oct 18 20:11:15 2021 +0200

    Ctrl+A selects all the row of the table view.

commit 5e16c1012b4e96583a56d74493d7b0a7b2ce6127
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Mon Oct 11 18:08:09 2021 +0200

    Make sure we use the American English locale.

commit e52c5fe970808c2d13bd62023cbdf6966b722936
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Mon Oct 11 11:00:01 2021 +0200

    Add Makefile to ease building while developing.

commit fa99a753f8c25b6483b127d88a58aaa6b9b84c6d
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Thu Oct 7 17:37:53 2021 +0200

    Implement the storage of the filters as a map relating the filter name and the filter shared pointer.

commit c6e1e6bebefc9bb8dfd6df70e503f4cc8670d5f9
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Tue Sep 28 19:22:35 2021 +0200

    Add file to ease working with YouCompleteMe.

commit a94e1709609fb329a92f36c9affdbc7fc444d4bc
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Tue Sep 28 19:05:28 2021 +0200

    The Qt bug was fixed.
    
    Gone back to the original implementation for initializing QVector with std vector iterators.
    Removed the #pragma GCC warnings that I had set long ago.

commit 28a8b33a2c1ffd8e0f787a5b19c49dce6bd4bddb
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Tue Sep 28 18:10:59 2021 +0200

    Implemented a vector of filters in ProcessingFlow.
    
    The idea is that it should be possible to store in the processing flow any number of filters.
    Then, upon need, a given filter might be applied _via_ its name.

commit 653e4ef56ccbe16440772ba108a010104ed1648d
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Mon Sep 20 17:56:13 2021 +0200

    Make sure we also take into account the fact the the user has unchecked the SavGol parameters checkbox.

commit dff511683ee7892d7f49fba6c44eb7697981dc49
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Thu Sep 16 15:57:58 2021 +0200

    Add provisions to use the local development libpappsomspp* libs.

commit c0f41283a1a3563aaa5a126580ce3c932bb360ea
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Wed Sep 15 18:44:23 2021 +0200

    New version.

commit a099f53253113d3cb5f6876b1409bd82ebab1ab2
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Wed Sep 15 17:36:50 2021 +0200

    Implement CMake-based .in file to configure the manual, in particular the location of the fop configuration file.

commit 841f5cd51e9dc3d21cdae00d089f0b7c39019057
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Wed Sep 15 17:32:15 2021 +0200

    Rename MAIN by removing useless minexpert2 string.

commit 4d87eb72ac05161822a0e38d339f33269300d09e
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Wed Sep 15 17:31:30 2021 +0200

    Add PHONY statements.

commit 2315785125cf5c732fe161a1fb35af175d3f597f
Author: Filippo Rusconi (Uploading Debian Developer) <lopippo@debian.org>
Date:   Tue May 4 14:36:53 2021 +0200

    Update gitlab repos upload script to account for read-write access token.
Created: 2021-09-28 Last update: 2022-05-27 16:10
Build log checks report 1 warning low
Build log checks report 1 warning
Created: 2021-04-22 Last update: 2021-04-22 13:37
Standards version of the package is outdated. wishlist
The package should be updated to follow the last version of Debian Policy (Standards-Version 4.6.1 instead of 4.6.0).
Created: 2022-05-11 Last update: 2022-05-11 23:25
news
[rss feed]
  • [2022-02-11] minexpert2 8.2.0-1 MIGRATED to testing (Debian testing watch)
  • [2022-02-01] Accepted minexpert2 8.2.0-1 (source) into unstable (Filippo Rusconi)
  • [2022-01-06] minexpert2 REMOVED from testing (Debian testing watch)
  • [2021-08-16] minexpert2 8.1.1-1 MIGRATED to testing (Debian testing watch)
  • [2021-04-26] Accepted minexpert2 8.1.1-1 (source) into unstable (Filippo Rusconi)
  • [2021-04-21] Accepted minexpert2 8.1.0-1 (source) into unstable (Filippo Rusconi)
  • [2021-04-16] Accepted minexpert2 8.0.3-1 (source) into unstable (Filippo Rusconi)
  • [2021-04-13] Accepted minexpert2 8.0.2-2 (source) into unstable (Filippo Rusconi)
  • [2021-03-24] Accepted minexpert2 8.0.1-1 (source) into unstable (Filippo Rusconi)
  • [2021-03-24] Accepted minexpert2 8.0.0-1 (source) into unstable (Filippo Rusconi)
  • [2021-03-03] minexpert2 7.4.1-1 MIGRATED to testing (Debian testing watch)
  • [2021-02-20] Accepted minexpert2 7.4.1-1 (source) into unstable (Filippo Rusconi)
  • [2021-01-17] minexpert2 7.4.0-1 MIGRATED to testing (Debian testing watch)
  • [2021-01-06] Accepted minexpert2 7.4.0-1 (source) into unstable (Filippo Rusconi)
  • [2020-11-16] minexpert2 7.3.0-1 MIGRATED to testing (Debian testing watch)
  • [2020-11-16] minexpert2 7.3.0-1 MIGRATED to testing (Debian testing watch)
  • [2020-11-06] Accepted minexpert2 7.3.0-1 (source) into unstable (Filippo Rusconi)
  • [2020-10-25] minexpert2 7.2.0-1 MIGRATED to testing (Debian testing watch)
  • [2020-10-15] Accepted minexpert2 7.2.0-1 (source) into unstable (Filippo Rusconi)
  • [2020-10-14] Accepted minexpert2 7.1.0-1 (source amd64 all) into unstable, unstable (Debian FTP Masters) (signed by: Filippo Rusconi)
  • [2020-10-14] Accepted minexpert2 7.0.1-1 (source amd64 all) into unstable, unstable (Debian FTP Masters) (signed by: Filippo Rusconi)
  • [2020-10-14] Accepted minexpert2 6.0.4-1 (source amd64 all) into unstable, unstable (Debian FTP Masters) (signed by: Filippo Rusconi)
bugs [bug history graph]
  • all: 0
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  • version: 8.2.0-1

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