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pbsuite

software for Pacific Biosciences sequencing data

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general
  • source: pbsuite (main)
  • version: 15.8.24+dfsg-3
  • maintainer: Debian Med Packaging Team (archive) (DMD) (LowNMU)
  • uploaders: Afif Elghraoui [DMD]
  • arch: all
  • std-ver: 4.2.0
  • VCS: Git (Browse, QA)
versions [more versions can be listed by madison] [old versions available from snapshot.debian.org]
[pool directory]
  • oldstable: 15.8.24+dfsg-2
  • stable: 15.8.24+dfsg-3
  • unstable: 15.8.24+dfsg-3
versioned links
  • 15.8.24+dfsg-2: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
  • 15.8.24+dfsg-3: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
binaries
  • pbhoney
  • pbjelly
  • pbsuite
  • python-pbbanana
  • python-pbsuite-utils
action needed
2 binary packages have unsatisfiable dependencies high
  • The dependencies of pbsuite=15.8.24+dfsg-3 cannot be satisfied in unstable on amd64 because: unsatisfied dependency on python-h5py
  • The dependencies of pbhoney=15.8.24+dfsg-3 cannot be satisfied in unstable on amd64 because: unsatisfied dependency on python-h5py
Created: 2019-11-21 Last update: 2019-12-06 22:13
Debci reports failed tests high
  • unstable: fail (log)
    The tests ran in 0:00:41
    Last run: 2019-12-05 23:28:48 UTC
    Previous status: fail

Created: 2019-11-20 Last update: 2019-12-06 21:43
The package has not entered testing even though the delay is over normal
The package has not entered testing even though the 5-day delay is over. Check why.
Created: 2019-08-20 Last update: 2019-12-06 21:38
2 new commits since last upload, is it time to release? normal
vcswatch reports that this package seems to have new commits in its VCS but has not yet updated debian/changelog. You should consider updating the Debian changelog and uploading this new version into the archive.

Here are the relevant commit logs:
commit 73e68c66db18e23bfd621292ce1dc6f253460a05
Author: Steffen Moeller <moeller@debian.org>
Date:   Mon Oct 7 17:46:03 2019 +0200

    d/u/metadata: yamllint

commit aebcb8cf0d63d924d22245e5d2ecfc01c4883a0c
Author: Afif Elghraoui <afif@debian.org>
Date:   Thu Feb 7 00:52:16 2019 -0500

    Remove myself from Uploaders
Created: 2019-02-07 Last update: 2019-12-04 12:49
lintian reports 3 warnings normal
Lintian reports 3 warnings about this package. You should make the package lintian clean getting rid of them.
Created: 2019-08-26 Last update: 2019-08-26 03:35
Standards version of the package is outdated. wishlist
The package should be updated to follow the last version of Debian Policy (Standards-Version 4.4.1 instead of 4.2.0).
Created: 2018-08-26 Last update: 2019-09-29 23:41
testing migrations
  • excuses:
    • Migrates after: python-intervaltree-bio
    • Migration status for pbsuite (- to 15.8.24+dfsg-3): BLOCKED: Rejected/violates migration policy/introduces a regression
    • Issues preventing migration:
    • Updating pbsuite introduces new bugs: #937258
    • uninstallable on arch amd64, autopkgtest delayed there
    • uninstallable on arch arm64, autopkgtest delayed there
    • Additional info:
    • pbhoney/amd64 unsatisfiable Depends: python-h5py
    • pbhoney/i386 unsatisfiable Depends: python-pysam (>= 0.8.0)
    • pbhoney/i386 unsatisfiable Depends: python-h5py
    • pbhoney/i386 unsatisfiable Depends: blasr (>= 5.3)
    • pbhoney/i386 unsatisfiable Depends: samtools
    • pbjelly/i386 unsatisfiable Depends: blasr (>= 5.3)
    • python-pbbanana/i386 unsatisfiable Depends: blasr
    • python-pbsuite-utils/i386 unsatisfiable Depends: python-pysam (>= 0.8.0)
    • Piuparts tested OK - https://piuparts.debian.org/sid/source/p/pbsuite.html
    • 476 days old (needed 5 days)
    • Not considered
news
[rss feed]
  • [2019-08-21] pbsuite REMOVED from testing (Debian testing watch)
  • [2019-02-13] pbsuite 15.8.24+dfsg-3 MIGRATED to testing (Debian testing watch)
  • [2018-08-17] Accepted pbsuite 15.8.24+dfsg-3 (source) into unstable (Andreas Tille)
  • [2018-07-07] pbsuite REMOVED from testing (Debian testing watch)
  • [2017-04-26] Accepted pbsuite 15.8.24+dfsg-2~bpo8+1 (source all) into jessie-backports->backports-policy, jessie-backports (Afif Elghraoui)
  • [2017-01-10] pbsuite 15.8.24+dfsg-2 MIGRATED to testing (Debian testing watch)
  • [2016-12-29] Accepted pbsuite 15.8.24+dfsg-2 (source) into unstable (Afif Elghraoui)
  • [2016-04-05] Accepted pbsuite 15.8.24+dfsg-1~bpo8+1 (source all) into jessie-backports, jessie-backports (Afif Elghraoui)
  • [2016-03-23] pbsuite 15.8.24+dfsg-1 MIGRATED to testing (Debian testing watch)
  • [2016-03-17] Accepted pbsuite 15.8.24+dfsg-1 (source all) into unstable, unstable (Afif Elghraoui)
bugs [bug history graph]
  • all: 1
  • RC: 1
  • I&N: 0
  • M&W: 0
  • F&P: 0
  • patch: 0
links
  • homepage
  • lintian (0, 3)
  • buildd: logs, clang, debcheck
  • popcon
  • browse source code
  • edit tags
  • screenshots
  • debci

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