Version 0.13-4 of python-gffutils is marked for autoremoval from testing on Sun 07 Dec 2025. It depends (transitively) on python-igraph, python-pysam, rdflib, tcsh, affected by #1107024, #1117766, #1117769, #1120205. You should try to prevent the removal by fixing these RC bugs.
Among the 4 debian patches
available in version 0.13-4 of the package,
we noticed the following issues:
3 patches
where the metadata indicates that the patch has not yet been forwarded
upstream. You should either forward the patch upstream or update the
metadata to document its real status.