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r-bioc-genomeinfodb

BioConductor utilities for manipulating chromosome identifiers

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general

source: r-bioc-genomeinfodb (main)
version: 1.42.3+dfsg-1
maintainer: Debian R Packages Maintainers (archive) (DMD) (LowNMU)
uploaders: Andreas Tille [DMD] – Charles Plessy [DMD]
arch: all
std-ver: 4.7.0
VCS: Git (Browse, QA)

versions [more versions can be listed by madison] [old versions available from snapshot.debian.org]

[pool directory]

o-o-stable: 1.26.2-2
oldstable: 1.34.9-1
stable: 1.42.3+dfsg-1
testing: 1.42.3+dfsg-1
unstable: 1.42.3+dfsg-1

versioned links

1.26.2-2: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
1.34.9-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
1.42.3+dfsg-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]

binaries

r-bioc-genomeinfodb

action needed

Debci reports failed tests high

unstable: fail (log)
The tests ran in 0:02:53
Last run: 2025-08-21T18:00:27.000Z
Previous status: unknown

testing: fail (log)
The tests ran in 0:03:00
Last run: 2025-08-13T18:07:19.000Z
Previous status: unknown

stable: fail (log)
The tests ran in 0:02:37
Last run: 2025-08-11T10:00:14.000Z
Previous status: unknown

Created: 2025-07-28 Last update: 2025-09-27 01:03

Marked for autoremoval on 23 October: #1111759 high

Version 1.42.3+dfsg-1 of r-bioc-genomeinfodb is marked for autoremoval from testing on Thu 23 Oct 2025. It is affected by #1111759. The removal of r-bioc-genomeinfodb will also cause the removal of (transitive) reverse dependencies: pigx-rnaseq, r-bioc-alabaster.ranges, r-bioc-alabaster.sce, r-bioc-alabaster.se, r-bioc-altcdfenvs, r-bioc-annotate, r-bioc-annotationdbi, r-bioc-annotationfilter, r-bioc-annotationhub, r-bioc-arrayexpress, r-bioc-ballgown, r-bioc-biomart, r-bioc-biostrings, r-bioc-biovizbase, r-bioc-bsgenome, r-bioc-bsseq, r-bioc-cner, r-bioc-cummerbund, r-bioc-dada2, r-bioc-degnorm, r-bioc-degreport, r-bioc-demixt, r-bioc-deseq, r-bioc-deseq2, r-bioc-destiny, r-bioc-dexseq, r-bioc-drimseq, r-bioc-dropletutils, r-bioc-dss, r-bioc-edaseq, r-bioc-ensembldb, r-bioc-experimenthub, r-bioc-fishpond, r-bioc-genefilter, r-bioc-genelendatabase, r-bioc-geneplotter, r-bioc-genomicalignments, r-bioc-genomicfeatures, r-bioc-genomicfiles, r-bioc-genomicranges, r-bioc-geoquery, r-bioc-ggbio, r-bioc-glmgampoi, r-bioc-go.db, r-bioc-gosemsim, r-bioc-goseq, r-bioc-grohmm, r-bioc-gseabase, r-bioc-gsva, r-bioc-gsvadata, r-bioc-gviz, r-bioc-hgu95a.db, r-bioc-htsfilter, r-bioc-ioniser, r-bioc-isoformswitchanalyzer, r-bioc-keggrest, r-bioc-megadepth, r-bioc-mofa, r-bioc-multiassayexperiment, r-bioc-mutationalpatterns, r-bioc-netsam, r-bioc-oligo, r-bioc-oligoclasses, r-bioc-org.hs.eg.db, r-bioc-organismdbi, r-bioc-phyloseq, r-bioc-purecn, r-bioc-pwalign, r-bioc-pwmenrich, r-bioc-qtlizer, r-bioc-rcpi, r-bioc-rgsepd, r-bioc-rsamtools, r-bioc-rtracklayer, r-bioc-saturn, r-bioc-scater, r-bioc-scran, r-bioc-scrnaseq, r-bioc-scuttle, r-bioc-shortread, r-bioc-singlecellexperiment, r-bioc-singler, r-bioc-spatialexperiment, r-bioc-structuralvariantannotation, r-bioc-summarizedexperiment, r-bioc-sva, r-bioc-tcgabiolinks, r-bioc-tfbstools, r-bioc-titancna, r-bioc-txdbmaker, r-bioc-tximeta, r-bioc-variantannotation, r-cran-alakazam, r-cran-shazam, r-cran-spp, r-cran-tigger, r-cran-wgcna, r-other-ascat. You should try to prevent the removal by fixing these RC bugs.

Created: 2025-08-28 Last update: 2025-09-27 00:30

A new upstream version is available: 1.44.3 high

A new upstream version 1.44.3 is available, you should consider packaging it.

Created: 2025-04-20 Last update: 2025-09-26 23:32

Standards version of the package is outdated. wishlist

The package should be updated to follow the last version of Debian Policy (Standards-Version 4.7.2 instead of 4.7.0).

Created: 2025-02-21 Last update: 2025-02-27 13:25

news

[2025-02-07] r-bioc-genomeinfodb 1.42.3+dfsg-1 MIGRATED to testing (Debian testing watch)
[2025-02-03] Accepted r-bioc-genomeinfodb 1.42.3+dfsg-1 (source) into unstable (Charles Plessy)
[2025-01-22] r-bioc-genomeinfodb 1.42.1+dfsg-2 MIGRATED to testing (Debian testing watch)
[2025-01-12] Accepted r-bioc-genomeinfodb 1.42.1+dfsg-2 (source) into unstable (Michael R. Crusoe)
[2024-12-06] Accepted r-bioc-genomeinfodb 1.42.1+dfsg-1 (source) into experimental (Michael R. Crusoe)
[2024-11-26] Accepted r-bioc-genomeinfodb 1.42.0+dfsg-1 (source) into experimental (Michael R. Crusoe)
[2024-09-09] r-bioc-genomeinfodb 1.40.1+dfsg-1 MIGRATED to testing (Debian testing watch)
[2024-08-16] Accepted r-bioc-genomeinfodb 1.40.1+dfsg-1 (source) into unstable (Michael R. Crusoe)
[2024-08-06] Accepted r-bioc-genomeinfodb 1.40.1+dfsg-1~0exp2 (source) into experimental (Michael R. Crusoe)
[2024-07-23] Accepted r-bioc-genomeinfodb 1.40.1+dfsg-1~0exp1 (source) into experimental (Michael R. Crusoe)
[2024-07-14] Accepted r-bioc-genomeinfodb 1.40.1+dfsg-1~0exp (source) into experimental (Michael R. Crusoe)
[2024-06-25] r-bioc-genomeinfodb REMOVED from testing (Debian testing watch)
[2024-02-15] r-bioc-genomeinfodb 1.38.6+dfsg-1 MIGRATED to testing (Debian testing watch)
[2024-02-13] Accepted r-bioc-genomeinfodb 1.38.6+dfsg-1 (source) into unstable (Andreas Tille)
[2024-01-04] r-bioc-genomeinfodb 1.38.5+dfsg-1 MIGRATED to testing (Debian testing watch)
[2024-01-02] Accepted r-bioc-genomeinfodb 1.38.5+dfsg-1 (source) into unstable (Andreas Tille)
[2023-12-21] r-bioc-genomeinfodb 1.38.2+dfsg-1 MIGRATED to testing (Debian testing watch)
[2023-12-18] Accepted r-bioc-genomeinfodb 1.38.2+dfsg-1 (source) into unstable (Andreas Tille)
[2023-12-17] r-bioc-genomeinfodb 1.38.1+dfsg-1 MIGRATED to testing (Debian testing watch)
[2023-11-30] Accepted r-bioc-genomeinfodb 1.38.1+dfsg-1 (source) into unstable (Charles Plessy)
[2023-10-13] r-bioc-genomeinfodb 1.36.4+dfsg-1 MIGRATED to testing (Debian testing watch)
[2023-10-09] Accepted r-bioc-genomeinfodb 1.36.4+dfsg-1 (source) into unstable (Andreas Tille)
[2023-10-01] r-bioc-genomeinfodb 1.36.3+dfsg-1 MIGRATED to testing (Debian testing watch)
[2023-09-29] Accepted r-bioc-genomeinfodb 1.36.3+dfsg-1 (source) into unstable (Andreas Tille)
[2023-09-03] r-bioc-genomeinfodb 1.36.2+dfsg-1 MIGRATED to testing (Debian testing watch)
[2023-08-31] Accepted r-bioc-genomeinfodb 1.36.2+dfsg-1 (source) into unstable (Andreas Tille)
[2023-08-19] r-bioc-genomeinfodb 1.36.1+dfsg-1 MIGRATED to testing (Debian testing watch)
[2023-07-21] Accepted r-bioc-genomeinfodb 1.36.1+dfsg-1 (source) into unstable (Charles Plessy) (signed by: Andreas Tille)
[2023-07-14] r-bioc-genomeinfodb REMOVED from testing (Debian testing watch)
[2023-02-09] r-bioc-genomeinfodb 1.34.9-1 MIGRATED to testing (Debian testing watch)

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bugs [bug history graph]

all: 1
RC: 1
I&N: 0
M&W: 0
F&P: 0
patch: 0

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version: 1.42.3+dfsg-1

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