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r-bioc-monocle

clustering, differential expression, and trajectory analysis for RNA-Seq

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general

source: r-bioc-monocle (main)
version: 2.34.0-3
maintainer: Debian R Packages Maintainers (archive) (DMD) (LowNMU)
uploaders: Andreas Tille [DMD]
arch: any
std-ver: 4.7.3
VCS: Git (Browse, QA)

versions [more versions can be listed by madison] [old versions available from snapshot.debian.org]

[pool directory]

o-o-stable: 2.18.0-1
oldstable: 2.26.0-2
stable: 2.34.0-2
unstable: 2.34.0-3

versioned links

2.18.0-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
2.26.0-2: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
2.34.0-2: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
2.34.0-3: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]

binaries

r-bioc-monocle

action needed

Debci reports failed tests high

unstable: pass (log)
The tests ran in 0:01:23
Last run: 2025-12-17T14:27:00.000Z
Previous status: unknown

testing: fail (log)
The tests ran in 0:00:16
Last run: 2025-11-26T14:02:28.000Z
Previous status: unknown

stable: pass (log)
The tests ran in 0:01:14
Last run: 2025-11-09T09:54:51.000Z
Previous status: unknown

Created: 2025-11-26 Last update: 2026-03-15 22:02

A new upstream version is available: 2.38.0 high

A new upstream version 2.38.0 is available, you should consider packaging it.

Created: 2025-04-18 Last update: 2026-03-15 19:01

debian/patches: 1 patch to forward upstream low

Among the 1 debian patch available in version 2.34.0-3 of the package, we noticed the following issues:

1 patch where the metadata indicates that the patch has not yet been forwarded upstream. You should either forward the patch upstream or update the metadata to document its real status.

Created: 2023-02-26 Last update: 2026-03-15 19:02

testing migrations

excuses:
- Migrates after: r-bioc-biobase, r-bioc-biocgenerics, r-bioc-biocviews, r-bioc-hsmmsinglecell, r-bioc-limma, r-cran-ddrtree, r-cran-irlba
- Migration status for r-bioc-monocle (- to 2.34.0-3): BLOCKED: Rejected/violates migration policy/introduces a regression
- Issues preventing migration:
- ∙ ∙ r-bioc-monocle unsatisfiable Build-Depends(-Arch) on s390x: architecture-is-little-endian
- ∙ ∙ Missing build on riscv64
- ∙ ∙ Missing build on s390x
- ∙ ∙ Autopkgtest deferred on riscv64: missing arch:riscv64 build
- ∙ ∙ Autopkgtest deferred on s390x: missing arch:s390x build
- ∙ ∙ Autopkgtest for r-bioc-monocle/2.34.0-3: amd64: Pass, arm64: Pass, ppc64el: Test triggered
- ∙ ∙ Lintian check waiting for test results on s390x, riscv64 - info
- ∙ ∙ Too young, only 1 of 5 days old
- ∙ ∙ Build-Depends(-Arch): r-bioc-monocle r-bioc-biobase (not considered)
- ∙ ∙ Build-Depends(-Arch): r-bioc-monocle r-bioc-biocgenerics (not considered)
- ∙ ∙ Build-Depends(-Arch): r-bioc-monocle r-bioc-biocviews
- ∙ ∙ Build-Depends(-Arch): r-bioc-monocle r-bioc-hsmmsinglecell (not considered)
- ∙ ∙ Build-Depends(-Arch): r-bioc-monocle r-bioc-limma (not considered)
- ∙ ∙ Build-Depends(-Arch): r-bioc-monocle r-cran-ddrtree (not considered)
- ∙ ∙ Build-Depends(-Arch): r-bioc-monocle r-cran-irlba (not considered)
- ∙ ∙ Depends: r-bioc-monocle r-bioc-biobase (not considered)
- ∙ ∙ Depends: r-bioc-monocle r-bioc-biocgenerics (not considered)
- ∙ ∙ Depends: r-bioc-monocle r-bioc-biocviews
- ∙ ∙ Depends: r-bioc-monocle r-bioc-hsmmsinglecell (not considered)
- ∙ ∙ Depends: r-bioc-monocle r-bioc-limma (not considered)
- ∙ ∙ Depends: r-bioc-monocle r-cran-ddrtree (not considered)
- ∙ ∙ Depends: r-bioc-monocle r-cran-irlba (not considered)
- Additional info (not blocking):
- ∙ ∙ Piuparts tested OK - https://piuparts.debian.org/sid/source/r/r-bioc-monocle.html
- ∙ ∙ Reproducibility check waiting for results on amd64
- ∙ ∙ Reproducibility check waiting for results on arm64
- ∙ ∙ Reproduced on armhf
- ∙ ∙ Reproduced on i386
- ∙ ∙ Reproducibility check waiting for results on ppc64el
- Not considered

news

[2026-03-15] Accepted r-bioc-monocle 2.34.0-3 (source) into unstable (Charles Plessy)
[2025-12-08] r-bioc-monocle REMOVED from testing (Debian testing watch)
[2025-01-22] r-bioc-monocle 2.34.0-2 MIGRATED to testing (Debian testing watch)
[2025-01-12] Accepted r-bioc-monocle 2.34.0-2 (source) into unstable (Michael R. Crusoe)
[2024-12-08] r-bioc-monocle 2.32.0-1 MIGRATED to testing (Debian testing watch)
[2024-12-07] r-bioc-monocle REMOVED from testing (Debian testing watch)
[2024-11-28] Accepted r-bioc-monocle 2.34.0-1 (source) into experimental (Michael R. Crusoe)
[2024-09-09] r-bioc-monocle 2.32.0-1 MIGRATED to testing (Debian testing watch)
[2024-08-17] Accepted r-bioc-monocle 2.32.0-1 (source) into unstable (Michael R. Crusoe)
[2024-07-14] Accepted r-bioc-monocle 2.32.0-1~0exp (source) into experimental (Michael R. Crusoe)
[2023-12-17] r-bioc-monocle 2.30.0-1 MIGRATED to testing (Debian testing watch)
[2023-11-30] Accepted r-bioc-monocle 2.30.0-1 (source) into unstable (Andreas Tille)
[2023-08-19] r-bioc-monocle 2.28.0-1 MIGRATED to testing (Debian testing watch)
[2023-07-21] Accepted r-bioc-monocle 2.28.0-1 (source) into unstable (Andreas Tille)
[2023-01-18] r-bioc-monocle 2.26.0-2 MIGRATED to testing (Debian testing watch)
[2022-11-28] Accepted r-bioc-monocle 2.26.0-2 (source) into unstable (Andreas Tille)
[2022-11-21] Accepted r-bioc-monocle 2.26.0-1 (source) into unstable (Andreas Tille)
[2022-10-29] r-bioc-monocle REMOVED from testing (Debian testing watch)
[2022-07-16] Accepted r-bioc-monocle 2.24.1-1 (source) into unstable (Andreas Tille)
[2022-05-24] r-bioc-monocle 2.22.0-2 MIGRATED to testing (Debian testing watch)
[2022-05-19] Accepted r-bioc-monocle 2.22.0-2 (source) into unstable (Nilesh Patra)
[2021-12-03] r-bioc-monocle 2.22.0-1 MIGRATED to testing (Debian testing watch)
[2021-11-25] Accepted r-bioc-monocle 2.22.0-1 (source) into unstable (Andreas Tille)
[2021-09-29] r-bioc-monocle 2.20.0-2 MIGRATED to testing (Debian testing watch)
[2021-09-18] Accepted r-bioc-monocle 2.20.0-2 (source) into unstable (Nilesh Patra)
[2021-09-06] Accepted r-bioc-monocle 2.20.0-1 (source) into unstable (Andreas Tille)
[2021-02-07] r-bioc-monocle 2.18.0-1 MIGRATED to testing (Debian testing watch)
[2020-11-03] Accepted r-bioc-monocle 2.18.0-1 (source) into unstable (Dylan Aïssi)
[2020-09-20] Accepted r-bioc-monocle 2.16.0-2 (source) into unstable (Andreas Tille)
[2020-09-18] Accepted r-bioc-monocle 2.16.0-1 (source amd64) into unstable, unstable (Debian FTP Masters) (signed by: Andreas Tille)

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bugs [bug history graph]

all: 0

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version: 2.34.0-2

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