Debian Package Tracker
Register | Log in
Subscribe

r-bioc-gsva

Gene Set Variation Analysis for microarray and RNA-seq data

Choose email to subscribe with

general
  • source: r-bioc-gsva (main)
  • version: 2.0.5+ds-2
  • maintainer: Debian R Packages Maintainers (archive) (DMD) (LowNMU)
  • uploaders: Steffen Moeller [DMD]
  • arch: any
  • std-ver: 4.7.3
  • VCS: Git (Browse, QA)
versions [more versions can be listed by madison] [old versions available from snapshot.debian.org]
[pool directory]
  • oldstable: 1.46.0+ds-1
  • stable: 2.0.5+ds-1
  • unstable: 2.0.5+ds-2
versioned links
  • 1.46.0+ds-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
  • 2.0.5+ds-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
  • 2.0.5+ds-2: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
binaries
  • r-bioc-gsva
action needed
source package has 3 unsatisfiable build dependencies high
  • Build dependencies in unstable cannot be satisfied on loong64 because: unsatisfied dependency on r-bioc-hdf5array
  • Build dependencies in unstable cannot be satisfied on amd64, riscv64, ppc64el, and arm64 because: unsatisfied dependency on r-api-bioc-3.20
  • Build dependencies in unstable cannot be satisfied on s390x, armhf, and i386 because: unsatisfied dependency on r-bioc-s4vectors
Created: 2026-07-11 Last update: 2026-08-26 19:00
1 binary package has unsatisfiable dependencies high
  • The dependencies of r-bioc-gsva=2.0.5+ds-2 cannot be satisfied in unstable on amd64, riscv64, ppc64el, and arm64 because: unsatisfied dependency on r-api-bioc-3.20
Created: 2026-07-11 Last update: 2026-08-26 19:00
Debci reports failed tests high
  • unstable: pass (log)
    The tests ran in 0:05:17
    Last run: 2026-05-24T20:55:03.000Z
    Previous status: unknown

  • testing: fail (log)
    The tests ran in 0:00:22
    Last run: 2025-11-26T12:30:36.000Z
    Previous status: unknown

  • stable: pass (log)
    The tests ran in 0:04:22
    Last run: 2026-07-18T10:08:56.000Z
    Previous status: unknown

Created: 2025-11-26 Last update: 2026-08-26 18:30
A new upstream version is available: 2.6.6 high
A new upstream version 2.6.6 is available, you should consider packaging it.
Created: 2026-07-30 Last update: 2026-08-26 13:32
The package has not entered testing even though the delay is over normal
The package has not entered testing even though the 5-day delay is over. Check why.
Created: 2026-04-13 Last update: 2026-08-26 18:02
version in VCS is newer than in repository, is it time to upload? normal
vcswatch reports that this package seems to have a new changelog entry (version 2.6.6+ds-1, distribution UNRELEASED) and new commits in its VCS. You should consider whether it's time to make an upload.

Here are the relevant commit messages:
commit f2f151f50d2837ff1101ff58895edc533dd1a48e
Author: Steffen Moeller <moeller@debian.org>
Date:   Wed Aug 12 00:16:06 2026 +0200

    Drop 'Rules-Requires-Root: no' from d/control (routine-update)

commit 7e795feec19583e954b407d1a436126118f4883a
Author: Steffen Moeller <moeller@debian.org>
Date:   Wed Aug 12 00:16:06 2026 +0200

    Restrict to R packages team core architectures (routine-update)

commit 02b96d27d9af8fb8f8eefb405e0a582a6ca6b105
Author: Steffen Moeller <moeller@debian.org>
Date:   Wed Aug 12 00:15:50 2026 +0200

    Changes made by dh-update-R and cme

commit df0ec02b84bc6c9192f5438c42451ac412e05741
Author: Steffen Moeller <moeller@debian.org>
Date:   Wed Aug 12 00:14:58 2026 +0200

    Changes made by cme

commit f0781901d06c279a7819234b9a07382610b1d87b
Author: Steffen Moeller <moeller@debian.org>
Date:   Wed Aug 12 00:08:26 2026 +0200

    Standards-Version: 4.7.4 (routine-update)

commit e805bacba6fa46bd278f4248064937433a0937f8
Merge: a17ccaa 9e98e9d
Author: Steffen Moeller <moeller@debian.org>
Date:   Wed Aug 12 00:08:26 2026 +0200

    Update upstream source from tag 'upstream/2.6.6+ds'
    
    Update to upstream version '2.6.6+ds'
    with Debian dir 66f0837ff143f9e23e8348c81650b01c46333936

commit 9e98e9d65ab844afd7cf15e53fc15a2cb339f4de
Author: Steffen Moeller <moeller@debian.org>
Date:   Wed Aug 12 00:08:23 2026 +0200

    New upstream version 2.6.6+ds

commit a17ccaa33d44920e5a5fe0ac502a1e2a1ce98153
Author: Steffen Moeller <moeller@debian.org>
Date:   Wed Aug 12 00:08:22 2026 +0200

    New upstream version

commit 526c76d1da99daf5d9dd8e2020463b9b815b67f3
Author: Steffen Moeller <moeller@debian.org>
Date:   Wed Aug 12 00:08:00 2026 +0200

    Removed build/ from source tree


https://salsa.debian.org/api/v4/projects/r-pkg-team%2Fr-bioc-gsva API request failed: 401 Unauthorized at /srv/qa.debian.org/data/vcswatch/vcswatch line 410.
Created: 2026-08-12 Last update: 2026-08-25 15:02
Standards version of the package is outdated. wishlist
The package should be updated to follow the last version of Debian Policy (Standards-Version 4.7.4 instead of 4.7.3).
Created: 2026-03-31 Last update: 2026-03-31 15:01
testing migrations
  • This package is part of the ongoing testing transition known as r-api-bioc-3.23. Please avoid uploads unrelated to this transition, they would likely delay it and require supplementary work from the release managers. On the other hand, if your package has problems preventing it to migrate to testing, please fix them as soon as possible. You can probably find supplementary information in the debian-release archives or in the corresponding release.debian.org bug.
  • excuses:
    • Migrates after: r-bioc-biobase, r-bioc-biocparallel, r-bioc-biocsingular, r-bioc-delayedarray, r-bioc-delayedmatrixstats, r-bioc-gseabase, r-bioc-hdf5array, r-bioc-iranges, r-bioc-s4vectors, r-bioc-singlecellexperiment, r-bioc-sparsematrixstats, r-bioc-spatialexperiment, r-bioc-summarizedexperiment
    • Migration status for r-bioc-gsva (- to 2.0.5+ds-2): BLOCKED: Rejected/violates migration policy/introduces a regression
    • Issues preventing migration:
    • ∙ ∙ r-bioc-gsva/amd64 has unsatisfiable dependency
    • ∙ ∙ r-bioc-gsva/arm64 has unsatisfiable dependency
    • ∙ ∙ r-bioc-gsva/ppc64el has unsatisfiable dependency
    • ∙ ∙ r-bioc-gsva/riscv64 has unsatisfiable dependency
    • ∙ ∙ Updating r-bioc-gsva would introduce bugs in testing: #1135463
    • ∙ ∙ Build-Depends(-Arch): r-bioc-gsva r-bioc-biobase
    • ∙ ∙ Build-Depends(-Arch): r-bioc-gsva r-bioc-biocparallel (not considered)
    • ∙ ∙ Build-Depends(-Arch): r-bioc-gsva r-bioc-biocsingular
    • ∙ ∙ Build-Depends(-Arch): r-bioc-gsva r-bioc-delayedarray (not considered)
    • ∙ ∙ Build-Depends(-Arch): r-bioc-gsva r-bioc-delayedmatrixstats (not considered)
    • ∙ ∙ Build-Depends(-Arch): r-bioc-gsva r-bioc-gseabase (not considered)
    • ∙ ∙ Build-Depends(-Arch): r-bioc-gsva r-bioc-hdf5array (not considered)
    • ∙ ∙ Build-Depends(-Arch): r-bioc-gsva r-bioc-iranges
    • ∙ ∙ Build-Depends(-Arch): r-bioc-gsva r-bioc-s4vectors
    • ∙ ∙ Build-Depends(-Arch): r-bioc-gsva r-bioc-singlecellexperiment (not considered)
    • ∙ ∙ Build-Depends(-Arch): r-bioc-gsva r-bioc-sparsematrixstats (not considered)
    • ∙ ∙ Build-Depends(-Arch): r-bioc-gsva r-bioc-spatialexperiment (not considered)
    • ∙ ∙ Build-Depends(-Arch): r-bioc-gsva r-bioc-summarizedexperiment (not considered)
    • Additional info (not blocking):
    • ∙ ∙ Piuparts tested OK - https://piuparts.debian.org/sid/source/r/r-bioc-gsva.html
    • ∙ ∙ Autopkgtest skipped on amd64: not installable
    • ∙ ∙ Autopkgtest skipped on arm64: not installable
    • ∙ ∙ Autopkgtest skipped on ppc64el: not installable
    • ∙ ∙ Autopkgtest skipped on riscv64: not installable
    • ∙ ∙ Reproduced on amd64 - info
    • ∙ ∙ Reproduced on arm64 - info
    • ∙ ∙ Reproduced on armhf - info
    • ∙ ∙ Reproduced on i386 - info
    • ∙ ∙ 164 days old (needed 5 days)
    • Not considered
news
[rss feed]
  • [2026-03-15] Accepted r-bioc-gsva 2.0.5+ds-2 (source) into unstable (Charles Plessy)
  • [2025-11-24] r-bioc-gsva REMOVED from testing (Debian testing watch)
  • [2025-01-26] r-bioc-gsva 2.0.5+ds-1 MIGRATED to testing (Debian testing watch)
  • [2025-01-22] Accepted r-bioc-gsva 2.0.5+ds-1 (source) into unstable (Michael R. Crusoe)
  • [2025-01-22] r-bioc-gsva 2.0.4+ds-2 MIGRATED to testing (Debian testing watch)
  • [2025-01-13] Accepted r-bioc-gsva 2.0.4+ds-2 (source) into unstable (Michael R. Crusoe)
  • [2025-01-02] r-bioc-gsva REMOVED from testing (Debian testing watch)
  • [2024-12-27] Accepted r-bioc-gsva 2.0.4+ds-1 (source) into experimental (Michael R. Crusoe)
  • [2024-12-08] r-bioc-gsva 1.52.3+ds-1 MIGRATED to testing (Debian testing watch)
  • [2024-12-07] r-bioc-gsva REMOVED from testing (Debian testing watch)
  • [2024-12-06] Accepted r-bioc-gsva 2.0.2+ds-1 (source) into experimental (Michael R. Crusoe)
  • [2024-11-29] Accepted r-bioc-gsva 2.0.1+ds-1 (source) into experimental (Michael R. Crusoe)
  • [2024-10-04] r-bioc-gsva 1.52.3+ds-1 MIGRATED to testing (Debian testing watch)
  • [2024-08-18] Accepted r-bioc-gsva 1.52.3+ds-1 (source) into unstable (Michael R. Crusoe)
  • [2024-07-22] Accepted r-bioc-gsva 1.52.3+ds-1~0exp1 (source) into experimental (Michael R. Crusoe)
  • [2024-07-14] Accepted r-bioc-gsva 1.52.3+ds-1~0exp (source) into experimental (Michael R. Crusoe)
  • [2024-06-25] r-bioc-gsva REMOVED from testing (Debian testing watch)
  • [2023-12-17] r-bioc-gsva 1.50.0+ds-1 MIGRATED to testing (Debian testing watch)
  • [2023-12-01] Accepted r-bioc-gsva 1.50.0+ds-1 (source) into unstable (Andreas Tille)
  • [2023-09-28] r-bioc-gsva 1.48.3+ds-1 MIGRATED to testing (Debian testing watch)
  • [2023-08-05] Accepted r-bioc-gsva 1.48.3+ds-1 (source) into unstable (Andreas Tille)
  • [2023-07-27] Accepted r-bioc-gsva 1.48.2+ds-1 (source) into unstable (Andreas Tille)
  • [2023-07-10] r-bioc-gsva REMOVED from testing (Debian testing watch)
  • [2022-12-05] r-bioc-gsva 1.46.0+ds-1 MIGRATED to testing (Debian testing watch)
  • [2022-11-21] Accepted r-bioc-gsva 1.46.0+ds-1 (source) into unstable (Andreas Tille)
  • [2022-09-28] r-bioc-gsva 1.44.5+ds-1 MIGRATED to testing (Debian testing watch)
  • [2022-09-26] Accepted r-bioc-gsva 1.44.5+ds-1 (source) into unstable (Andreas Tille)
  • [2022-09-25] Accepted r-bioc-gsva 1.44.4+ds-1 (source) into unstable (Andreas Tille)
  • [2022-09-21] r-bioc-gsva 1.44.3+ds-3 MIGRATED to testing (Debian testing watch)
  • [2022-09-14] Accepted r-bioc-gsva 1.44.3+ds-3 (source) into unstable (Nilesh Patra)
  • 1
  • 2
bugs [bug history graph]
  • all: 1
  • RC: 1
  • I&N: 0
  • M&W: 0
  • F&P: 0
  • patch: 0
links
  • homepage
  • lintian
  • buildd: logs, debcheck, cross
  • popcon
  • browse source code
  • other distros
  • debci

Debian Package Tracker — Copyright 2013-2025 The Distro Tracker Developers
Report problems to the tracker.debian.org pseudo-package in the Debian BTS.
Documentation — Bugs — Git Repository — Contributing