Debian Package Tracker
Register | Log in
Subscribe

vg

tools for working with genome variation graphs

Choose email to subscribe with

general
  • source: vg (main)
  • version: 1.30.0+ds-1
  • maintainer: Debian Med Packaging Team (archive) (DMD) (LowNMU)
  • uploaders: Michael R. Crusoe [DMD]
  • arch: all amd64 arm64 mips64el ppc64el s390x x32
  • std-ver: 4.5.1
  • VCS: Git (Browse, QA)
versions [more versions can be listed by madison] [old versions available from snapshot.debian.org]
[pool directory]
  • stable: 1.30.0+ds-1
  • unstable: 1.30.0+ds-1
versioned links
  • 1.30.0+ds-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
binaries
  • vg
  • vg-docs
action needed
Debci reports failed tests high
  • unstable: fail (log)
    The tests ran in 0:00:51
    Last run: 2023-03-16T22:28:42.000Z
    Previous status: fail

  • testing: pass (log)
    The tests ran in 0:01:45
    Last run: 2022-08-28T02:35:19.000Z
    Previous status: pass

  • stable: pass (log)
    The tests ran in 0:01:51
    Last run: 2023-03-26T07:17:51.000Z
    Previous status: pass

Created: 2023-03-01 Last update: 2023-03-28 00:05
A new upstream version is available: 1.46.0 high
A new upstream version 1.46.0 is available, you should consider packaging it.
Created: 2021-03-04 Last update: 2023-03-27 22:39
lintian reports 2 errors and 8 warnings high
Lintian reports 2 errors and 8 warnings about this package. You should make the package lintian clean getting rid of them.
Created: 2021-10-23 Last update: 2023-02-18 12:40
The package has not entered testing even though the delay is over normal
The package has not entered testing even though the 20-day delay is over. Check why.
Created: 2022-09-05 Last update: 2023-03-28 00:01
Depends on packages which need a new maintainer normal
The packages that vg depends on which need a new maintainer are:
  • rasqal (#1012728)
    • Build-Depends: rasqal-utils
  • raptor2 (#1012727)
    • Depends: libraptor2-0
    • Build-Depends: raptor2-utils libraptor2-dev
  • redland (#1012729)
    • Build-Depends: librdf0-dev
Created: 2022-06-13 Last update: 2023-03-27 21:33
version in VCS is newer than in repository, is it time to upload? normal
vcswatch reports that this package seems to have a new changelog entry (version 1.45.0+ds-1, distribution UNRELEASED) and new commits in its VCS. You should consider whether it's time to make an upload.

Here are the relevant commit messages:
commit e9a4da402022ce084a50d4c09877c9dcb6f59b52
Author: Michael R. Crusoe <michael.crusoe@gmail.com>
Date:   Sun Jan 22 17:11:37 2023 +0100

    fix for SIMDe patch

commit 021f7e55fca54ad11c0fa1c8ee9760c16ac6bf77
Author: Michael R. Crusoe <michael.crusoe@gmail.com>
Date:   Sun Jan 22 15:48:58 2023 +0100

    Force the use of the system package for SIMDe.

commit d135442bc1a25e99a1bd765628b2b3b9b4220597
Author: Pierre Gruet <pgt@debian.org>
Date:   Sat Jan 21 12:19:00 2023 +0100

    Using tags and filenamemangle in d/watch

commit c0989609f8e4b4ee783a608216d9a9c2f96d649d
Author: Andreas Tille <tille@debian.org>
Date:   Thu Jan 19 14:58:11 2023 +0100

    Fix broken replacement by lintian-bruch of libtinfo6, libncurses-dev

commit b9ac46c3d0a92d481a1650312f461fcb2bd88a9e
Author: Andreas Tille <tille@debian.org>
Date:   Thu Jan 19 14:51:12 2023 +0100

    Refresh patches

commit e30b59d1d8cf9d75f2477dfd10077876fa59433e
Author: Andreas Tille <tille@debian.org>
Date:   Thu Jan 19 14:36:35 2023 +0100

    Remove constraints unnecessary since buster (oldstable)
    
    * Build-Depends: Replace dependency on transitional package libncurses5-dev with replacement libtinfo6 (= 6.1+20181013-2+deb10u2), libncurses-dev (= 6.1+20181013-2+deb10u2).
    
    Changes-By: deb-scrub-obsolete

commit aeb48ca281e1a36a51bd43a7e8842e2c80660db3
Author: Andreas Tille <tille@debian.org>
Date:   Thu Jan 19 14:35:49 2023 +0100

    Update lintian override info to new format:
    + debian/source/lintian-overrides: line 2
    + debian/vg.lintian-overrides: line 5, 8-12
    
    Changes-By: lintian-brush
    Fixes: lintian: mismatched-override
    See-also: https://lintian.debian.org/tags/mismatched-override.html

commit 7c17228751e1bfe18df5f542f28606dac3604b0b
Merge: 7804cdf e0515fa
Author: Andreas Tille <tille@debian.org>
Date:   Thu Jan 19 14:35:21 2023 +0100

    Update upstream source from tag 'upstream/1.45.0+ds'
    
    Update to upstream version '1.45.0+ds'
    with Debian dir 67b83d31209587d2575757277bd0f6a7fd630d64

commit e0515fa737919ba9f2afb9d5f8ada0c0df03611c
Author: Andreas Tille <tille@debian.org>
Date:   Thu Jan 19 14:32:12 2023 +0100

    New upstream version 1.45.0+ds

commit 7804cdf4e567f3a5d6856d92e0dfb7dc44530156
Author: Andreas Tille <tille@debian.org>
Date:   Thu Jan 19 14:32:07 2023 +0100

    routine-update: New upstream version

commit 0ea6e01a2331cef0ce351853f717b7d4e180b94b
Author: Andreas Tille <tille@debian.org>
Date:   Thu Jan 19 14:28:23 2023 +0100

    Standards-Version: 4.6.2

commit 139e0e3bb1e8fd5c2cbde5e372d6dde274ee5100
Author: Michael R. Crusoe <michael.crusoe@gmail.com>
Date:   Fri Dec 2 15:55:44 2022 +0100

    d/control: new build-dep: libzstd-dev

commit 4007a6c49eea5ad84a00655d9bcc334e1db814df
Author: Michael R. Crusoe <michael.crusoe@gmail.com>
Date:   Fri Dec 2 12:45:09 2022 +0100

    d/patches/series: skip the ssw patches to use the code copy for now.

commit 19c43fa6ae97c11c556fe908ba94d2d79a3ae967
Author: Michael R. Crusoe <michael.crusoe@gmail.com>
Date:   Fri Dec 2 12:24:23 2022 +0100

    Refreshed patches, moved some of the crossbuild fixes into earlier patches to reduce churn.

commit f1ba22ec77bd7a553962f4d55ff9c4b00e5ea6ff
Author: Michael R. Crusoe <michael.crusoe@gmail.com>
Date:   Fri Dec 2 11:12:56 2022 +0100

    Remove duplicate line from changelog.
    
    Changes-By: lintian-brush

commit 0a9d039dbae5b12dae0a2463c16000f87167a02c
Merge: fbebde7 b9ae1f1
Author: Michael R. Crusoe <michael.crusoe@gmail.com>
Date:   Fri Dec 2 11:12:42 2022 +0100

    Update upstream source from tag 'upstream/1.44.0+ds'
    
    Update to upstream version '1.44.0+ds'
    with Debian dir 11888849466ed4079b14fc2c59b26f92ca29cdf3

commit b9ae1f1458612e7a17a705bbfee596cfff9eab87
Author: Michael R. Crusoe <michael.crusoe@gmail.com>
Date:   Fri Dec 2 11:09:50 2022 +0100

    New upstream version 1.44.0+ds

commit fbebde7896bdf6393a6cf7f0fbefa56fb0cc5e1b
Author: Michael R. Crusoe <michael.crusoe@gmail.com>
Date:   Fri Dec 2 11:09:44 2022 +0100

    routine-update: New upstream version

commit 90d0b3dc7cdd9bd0cea6677597339ea4f0ed62eb
Author: Michael R. Crusoe <michael.crusoe@gmail.com>
Date:   Fri Dec 2 11:06:06 2022 +0100

    Keep vendored copy of libssw until vg updates to a regular release

commit 82dfd14e44b7522e22b78dbabf14d17dc5dec43d
Author: Michael R. Crusoe <michael.crusoe@gmail.com>
Date:   Wed Oct 19 11:35:07 2022 +0200

    cleanup changelog

commit cb41281e74f342b103a98e2785796d9eeba3fa3e
Author: Michael R. Crusoe <michael.crusoe@gmail.com>
Date:   Wed Oct 19 11:34:15 2022 +0200

    refresh patches again

commit 83cf800106efeca16d939a193e1caa87aeac8c76
Author: Michael R. Crusoe <michael.crusoe@gmail.com>
Date:   Wed Oct 19 10:55:23 2022 +0200

    Remove duplicate line from changelog.
    
    Changes-By: lintian-brush

commit 7ae9d10d8177ce0becc7c3ca411fe8ac3da86cfd
Merge: c37aef7 a41c012
Author: Michael R. Crusoe <michael.crusoe@gmail.com>
Date:   Wed Oct 19 10:55:10 2022 +0200

    Update upstream source from tag 'upstream/1.43.0+ds'
    
    Update to upstream version '1.43.0+ds'
    with Debian dir c71b2dba680d0d442cef73b2c8400d924c7f8c7f

commit a41c0124d444c8cca09d8804559d9a445b66bd82
Author: Michael R. Crusoe <michael.crusoe@gmail.com>
Date:   Wed Oct 19 10:52:46 2022 +0200

    New upstream version 1.43.0+ds

commit c37aef71090b1127c035edf7b513b363a6d1bfbb
Author: Michael R. Crusoe <michael.crusoe@gmail.com>
Date:   Wed Oct 19 10:52:42 2022 +0200

    routine-update: New upstream version

commit 1d1f49a0feaec4cf5d79cded033d8a9891886730
Author: Michael R. Crusoe <michael.crusoe@gmail.com>
Date:   Thu Aug 11 15:58:36 2022 +0200

    Remove duplicate line from changelog.
    
    Changes-By: lintian-brush

commit 083af4ae04af8feb0330cd6f17330974054d4e06
Author: Michael R. Crusoe <michael.crusoe@gmail.com>
Date:   Thu Aug 11 15:58:24 2022 +0200

    routine-update: Standards-Version: 4.6.1

commit 98b87eeff202e9a4e597c75c5e49bcefff8d741b
Merge: 9b151b5 485f66c
Author: Michael R. Crusoe <michael.crusoe@gmail.com>
Date:   Thu Aug 11 15:58:24 2022 +0200

    Update upstream source from tag 'upstream/1.42.0+ds'
    
    Update to upstream version '1.42.0+ds'
    with Debian dir adc8649ff2c33afae3cf8937a65e9356dc44c8da

commit 485f66cb62a4c8c2100c646a874e86fa0ceb01f7
Author: Michael R. Crusoe <michael.crusoe@gmail.com>
Date:   Thu Aug 11 15:56:17 2022 +0200

    New upstream version 1.42.0+ds

commit 9b151b562eb068bdb48c56a569d7b73031ec0870
Author: Michael R. Crusoe <michael.crusoe@gmail.com>
Date:   Thu Aug 11 15:56:12 2022 +0200

    routine-update: New upstream version

commit f35bf129c24aeab2c206b70231a852bce294dd64
Author: Michael R. Crusoe <michael.crusoe@gmail.com>
Date:   Fri Oct 8 16:00:19 2021 +0200

    update clean list

commit 845f264dfd77e6fdd8688401444050520a32e7c9
Author: Michael R. Crusoe <michael.crusoe@gmail.com>
Date:   Fri Oct 8 15:56:17 2021 +0200

    Refresh patches.

commit 285fe10be0ac69680a209d5ab72987eeb45b3d90
Author: Michael R. Crusoe <michael.crusoe@gmail.com>
Date:   Fri Oct 8 15:37:05 2021 +0200

    routine-update: Standards-Version: 4.6.0

commit e1ae857f75dd6748d1f0b8f209bbf3a18d08cc9e
Merge: 6efcea9 ebde6cb
Author: Michael R. Crusoe <michael.crusoe@gmail.com>
Date:   Fri Oct 8 15:37:04 2021 +0200

    Update upstream source from tag 'upstream/1.35.0+ds'
    
    Update to upstream version '1.35.0+ds'
    with Debian dir 98723efc23a76c9a1601ef1e93ca9d3553a4881a

commit ebde6cb6c615ebf75e9a5f7bc0009fafe4460db2
Author: Michael R. Crusoe <michael.crusoe@gmail.com>
Date:   Fri Oct 8 15:34:36 2021 +0200

    New upstream version 1.35.0+ds

commit 6efcea9cfe0f14cb9454cc49263c79747290f80d
Author: Michael R. Crusoe <michael.crusoe@gmail.com>
Date:   Fri Oct 8 15:34:31 2021 +0200

    routine-update: New upstream version

commit 002eb1f30e5f6304a5bc9fc2a1cc5c7ba4deb668
Author: Michael R. Crusoe <michael.crusoe@gmail.com>
Date:   Fri Mar 5 11:24:13 2021 +0100

    TODO: fix libssw divergence

commit 50719e67baa17418852758881f4290b222a0f64c
Author: Michael R. Crusoe <michael.crusoe@gmail.com>
Date:   Fri Mar 5 11:07:21 2021 +0100

    Freshen patches

commit ffa6cf79cc209b7d1205c4e53ec7d9837bca63a3
Author: Michael R. Crusoe <michael.crusoe@gmail.com>
Date:   Fri Mar 5 10:55:31 2021 +0100

    debian/copyright: freshen

commit c06616e9fdc957d30377418c6d8e422d7f7a25ac
Merge: e06161d 6ff1c44
Author: Michael R. Crusoe <michael.crusoe@gmail.com>
Date:   Fri Mar 5 10:53:13 2021 +0100

    Update upstream source from tag 'upstream/1.31.0+ds'
    
    Update to upstream version '1.31.0+ds'
    with Debian dir 4b042926da9607137a1f947a5de52c0c62d1c938

commit 6ff1c441fcd52ddae0aa6168e04fd5df7b9fe3ad
Author: Michael R. Crusoe <michael.crusoe@gmail.com>
Date:   Fri Mar 5 10:50:48 2021 +0100

    New upstream version 1.31.0+ds

commit e06161dcfd15597d460b27718be945eb7b2aa03a
Author: Michael R. Crusoe <michael.crusoe@gmail.com>
Date:   Fri Mar 5 10:50:43 2021 +0100

    routine-update: New upstream version

commit faccffcf87295847371f0770baae8fba96bebcda
Author: Michael R. Crusoe <1330696+mr-c@users.noreply.github.com>
Date:   Fri Jan 29 08:50:20 2021 +0100

    debian/rules: if the SIMD level is supported by the build CPU as reported by lscpu, then require the tests for that version of the vg binary to pass.

commit b457140f1b05313604bfb82c11ee956e153982a4
Author: Michael R. Crusoe <1330696+mr-c@users.noreply.github.com>
Date:   Thu Jan 28 18:07:18 2021 +0100

    debian/rules: unset LD_PRELOAD for qemu build + testing

commit 48504edc761d0d2948ead02e96b1e496766345f2
Author: Michael R. Crusoe <1330696+mr-c@users.noreply.github.com>
Date:   Thu Jan 28 13:21:53 2021 +0100

    Added patch to deal with bashim.
Created: 2021-10-08 Last update: 2023-03-22 04:43
debian/patches: 2 patches to forward upstream low

Among the 29 debian patches available in version 1.30.0+ds-1 of the package, we noticed the following issues:

  • 2 patches where the metadata indicates that the patch has not yet been forwarded upstream. You should either forward the patch upstream or update the metadata to document its real status.
Created: 2023-02-26 Last update: 2023-02-27 20:59
Build log checks report 1 warning low
Build log checks report 1 warning
Created: 2022-05-02 Last update: 2022-05-02 16:00
Standards version of the package is outdated. wishlist
The package should be updated to follow the last version of Debian Policy (Standards-Version 4.6.2 instead of 4.5.1).
Created: 2021-08-18 Last update: 2022-12-17 19:17
testing migrations
  • This package will soon be part of the auto-libssw transition. You might want to ensure that your package is ready for it. You can probably find supplementary information in the debian-release archives or in the corresponding release.debian.org bug.
  • This package will soon be part of the boost1.81 transition. You might want to ensure that your package is ready for it. You can probably find supplementary information in the debian-release archives or in the corresponding release.debian.org bug.
  • excuses:
    • Migration status for vg (- to 1.30.0+ds-1): BLOCKED: Rejected/violates migration policy/introduces a regression
    • Issues preventing migration:
    • ∙ ∙ Updating vg would introduce bugs in testing: #1013061
    • ∙ ∙ blocked by freeze: is not in testing
    • Additional info:
    • ∙ ∙ Piuparts tested OK - https://piuparts.debian.org/sid/source/v/vg.html
    • ∙ ∙ autopkgtest for vg/1.30.0+ds-1: amd64: Pass, arm64: No test results, armel: No test results, armhf: No test results, i386: No test results, ppc64el: No test results, s390x: No test results
    • ∙ ∙ 790 days old (needed 20 days)
    • Not considered
news
[rss feed]
  • [2022-09-06] vg REMOVED from testing (Debian testing watch)
  • [2022-08-21] vg 1.30.0+ds-1 MIGRATED to testing (Debian testing watch)
  • [2022-08-20] vg REMOVED from testing (Debian testing watch)
  • [2021-02-01] vg 1.30.0+ds-1 MIGRATED to testing (Debian testing watch)
  • [2021-01-27] Accepted vg 1.30.0+ds-1 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
  • [2020-12-26] Accepted vg 1.29.0+ds-2~0exp0simde (source) into experimental (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
  • [2020-12-23] vg 1.29.0+ds-1 MIGRATED to testing (Debian testing watch)
  • [2020-12-17] Accepted vg 1.29.0+ds-1 (source) into unstable (Étienne Mollier)
  • [2020-11-29] Accepted vg 1.27.1+ds-2~0exp0simde (source) into experimental (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
  • [2020-10-10] vg 1.27.1+ds-1 MIGRATED to testing (Debian testing watch)
  • [2020-10-05] Accepted vg 1.27.1+ds-1 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
  • [2020-09-03] vg 1.26.0+ds-1 MIGRATED to testing (Debian testing watch)
  • [2020-08-29] Accepted vg 1.26.0+ds-1 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
  • [2020-08-06] vg 1.25.0+ds-3 MIGRATED to testing (Debian testing watch)
  • [2020-07-31] Accepted vg 1.25.0+ds-3 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
  • [2020-07-21] vg 1.25.0+ds-2 MIGRATED to testing (Debian testing watch)
  • [2020-07-14] Accepted vg 1.25.0+ds-2 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
  • [2020-06-25] Accepted vg 1.25.0+ds-1 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
  • [2020-05-29] vg 1.24.0+ds-1 MIGRATED to testing (Debian testing watch)
  • [2020-05-23] Accepted vg 1.24.0+ds-1 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
  • [2020-04-25] vg 1.23.0+ds-2 MIGRATED to testing (Debian testing watch)
  • [2020-04-20] Accepted vg 1.23.0+ds-2 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
  • [2020-04-06] vg 1.23.0+ds-1 MIGRATED to testing (Debian testing watch)
  • [2020-03-30] Accepted vg 1.23.0+ds-1 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
  • [2020-03-03] vg 1.22.0+ds-1 MIGRATED to testing (Debian testing watch)
  • [2020-02-26] Accepted vg 1.22.0+ds-1 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
  • [2020-02-25] Accepted vg 1.21.0+ds2-4 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
  • [2020-02-25] vg 1.21.0+ds2-3 MIGRATED to testing (Debian testing watch)
  • [2020-02-12] Accepted vg 1.21.0+ds2-3 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
  • [2020-02-12] Accepted vg 1.21.0+ds2-2 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
  • 1
  • 2
bugs [bug history graph]
  • all: 4
  • RC: 1
  • I&N: 2
  • M&W: 1
  • F&P: 0
  • patch: 0
links
  • homepage
  • lintian (2, 8)
  • buildd: logs, checks, cross
  • popcon
  • browse source code
  • edit tags
  • other distros
  • screenshots
  • debian patches
  • debci
ubuntu Ubuntu logo [Information about Ubuntu for Debian Developers]
  • version: 1.30.0+ds-1
  • 1 bug

Debian Package Tracker — Copyright 2013-2018 The Distro Tracker Developers
Report problems to the tracker.debian.org pseudo-package in the Debian BTS.
Documentation — Bugs — Git Repository — Contributing