r-bioc-deseq2 - Debian Package Tracker

general

source: r-bioc-deseq2 (main)
version: 1.52.0+dfsg-1
maintainer: Debian R Packages Maintainers (archive) (DMD) (LowNMU)
uploaders: Andreas Tille [DMD] – Michael R. Crusoe [DMD]
arch: any
std-ver: 4.7.4
VCS: Git (Browse, QA)

versions [more versions can be listed by madison] [old versions available from snapshot.debian.org]

[pool directory]

o-o-stable: 1.30.1+dfsg-1
oldstable: 1.38.3+dfsg-1
stable: 1.46.0+dfsg-2
unstable: 1.52.0+dfsg-1

versioned links

1.30.1+dfsg-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
1.38.3+dfsg-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
1.46.0+dfsg-2: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
1.52.0+dfsg-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]

binaries

r-bioc-deseq2

action needed

Debci reports failed tests high

unstable: fail (log)
The tests ran in 0:00:28
Last run: 2026-08-17T20:59:07.000Z
Previous status: unknown

testing: fail (log)
The tests ran in 0:00:17
Last run: 2025-11-26T13:20:09.000Z
Previous status: unknown

stable: pass (log)
The tests ran in 0:03:08
Last run: 2026-07-16T12:42:34.000Z
Previous status: unknown

Created: 2025-11-26 Last update: 2026-10-18 11:00

Problems while searching for a new upstream version high

uscan had problems while searching for a new upstream version:

In watchfile debian/watch, reading webpage
  https://bioconductor.org/packages/DESeq2 failed: 500 Can't connect to bioconductor.org:443 (Temporary failure in name resolution)

Created: 2026-10-17 Last update: 2026-10-18 10:20

debian/patches: 1 patch with invalid metadata high

Among the 1 debian patch available in version 1.52.0+dfsg-1 of the package, we noticed the following issues:

1 patch with invalid metadata that ought to be fixed.

Created: 2023-02-26 Last update: 2026-07-28 23:00

The package has not entered testing even though the delay is over normal

The package has not entered testing even though the 5-day delay is over. Check why.

Created: 2026-08-02 Last update: 2026-10-18 11:32

lintian reports 2 warnings normal

Lintian reports 2 warnings about this package. You should make the package lintian clean getting rid of them.

Created: 2026-07-28 Last update: 2026-07-28 20:32

testing migrations

excuses:
- Migrates after: r-bioc-biocparallel, r-bioc-genomicranges, r-bioc-iranges, r-bioc-s4vectors, r-bioc-summarizedexperiment
- Migration status for r-bioc-deseq2 (- to 1.52.0+dfsg-1): BLOCKED: Rejected/violates migration policy/introduces a regression
- Issues preventing migration:
- ∙ ∙ Autopkgtest for r-bioc-deseq2/1.52.0+dfsg-1: amd64: Failed ♻, arm64: Failed ♻, ppc64el: Failed ♻, riscv64: Failed ♻
- ∙ ∙ Build-Depends(-Arch): r-bioc-deseq2 r-bioc-biocparallel (not considered)
- ∙ ∙ Build-Depends(-Arch): r-bioc-deseq2 r-bioc-genomicranges
- ∙ ∙ Build-Depends(-Arch): r-bioc-deseq2 r-bioc-iranges (not considered)
- ∙ ∙ Build-Depends(-Arch): r-bioc-deseq2 r-bioc-s4vectors (not considered)
- ∙ ∙ Build-Depends(-Arch): r-bioc-deseq2 r-bioc-summarizedexperiment (not considered)
- ∙ ∙ Depends: r-bioc-deseq2 r-bioc-biocparallel (not considered)
- ∙ ∙ Depends: r-bioc-deseq2 r-bioc-genomicranges
- ∙ ∙ Depends: r-bioc-deseq2 r-bioc-iranges (not considered)
- ∙ ∙ Depends: r-bioc-deseq2 r-bioc-s4vectors (not considered)
- ∙ ∙ Depends: r-bioc-deseq2 r-bioc-summarizedexperiment (not considered)
- Additional info (not blocking):
- ∙ ∙ Piuparts tested OK - https://piuparts.debian.org/sid/source/r/r-bioc-deseq2.html
- ∙ ∙ Reproduced on amd64 - info
- ∙ ∙ Reproduced on arm64 - info
- ∙ ∙ Reproduced on armhf - info
- ∙ ∙ Reproduced on i386 - info
- ∙ ∙ 82 days old (needed 5 days)
- Not considered

news

[rss feed]

[2026-07-28] Accepted r-bioc-deseq2 1.52.0+dfsg-1 (source) into unstable (Charles Plessy)
[2026-03-15] Accepted r-bioc-deseq2 1.46.0+dfsg-3 (source) into unstable (Charles Plessy)
[2025-11-24] r-bioc-deseq2 REMOVED from testing (Debian testing watch)
[2025-01-22] r-bioc-deseq2 1.46.0+dfsg-2 MIGRATED to testing (Debian testing watch)
[2025-01-21] r-bioc-deseq2 REMOVED from testing (Debian testing watch)
[2025-01-13] Accepted r-bioc-deseq2 1.46.0+dfsg-2 (source) into unstable (Michael R. Crusoe)
[2024-11-28] Accepted r-bioc-deseq2 1.46.0+dfsg-1 (source) into experimental (Michael R. Crusoe)
[2024-09-10] r-bioc-deseq2 1.44.0+dfsg-1 MIGRATED to testing (Debian testing watch)
[2024-08-17] Accepted r-bioc-deseq2 1.44.0+dfsg-1 (source) into unstable (Michael R. Crusoe)
[2024-08-06] Accepted r-bioc-deseq2 1.44.0+dfsg-1~0exp1 (source) into experimental (Michael R. Crusoe)
[2024-07-14] Accepted r-bioc-deseq2 1.44.0+dfsg-1~0exp (source) into experimental (Michael R. Crusoe)
[2024-06-25] r-bioc-deseq2 REMOVED from testing (Debian testing watch)
[2024-03-30] r-bioc-deseq2 1.42.1+dfsg-1 MIGRATED to testing (Debian testing watch)
[2024-03-11] Accepted r-bioc-deseq2 1.42.1+dfsg-1 (source) into unstable (Michael R. Crusoe)
[2023-12-17] r-bioc-deseq2 1.42.0+dfsg-1 MIGRATED to testing (Debian testing watch)
[2023-11-30] Accepted r-bioc-deseq2 1.42.0+dfsg-1 (source) into unstable (Andreas Tille)
[2023-09-12] r-bioc-deseq2 1.40.2+dfsg-1 MIGRATED to testing (Debian testing watch)
[2023-07-27] Accepted r-bioc-deseq2 1.40.2+dfsg-1 (source) into unstable (Andreas Tille)
[2023-07-14] r-bioc-deseq2 REMOVED from testing (Debian testing watch)
[2023-01-26] r-bioc-deseq2 1.38.3+dfsg-1 MIGRATED to testing (Debian testing watch)
[2023-01-21] Accepted r-bioc-deseq2 1.38.3+dfsg-1 (source) into unstable (Andreas Tille)
[2022-12-25] r-bioc-deseq2 1.38.2+dfsg-1 MIGRATED to testing (Debian testing watch)
[2022-12-19] Accepted r-bioc-deseq2 1.38.2+dfsg-1 (source) into unstable (Andreas Tille)
[2022-12-05] r-bioc-deseq2 1.38.1+dfsg-1 MIGRATED to testing (Debian testing watch)
[2022-11-21] Accepted r-bioc-deseq2 1.38.1+dfsg-1 (source) into unstable (Andreas Tille)
[2022-05-24] r-bioc-deseq2 1.36.0+dfsg-1 MIGRATED to testing (Debian testing watch)
[2022-05-16] Accepted r-bioc-deseq2 1.36.0+dfsg-1 (source) into unstable (Andreas Tille)
[2021-12-03] r-bioc-deseq2 1.34.0+dfsg-1 MIGRATED to testing (Debian testing watch)
[2021-12-03] r-bioc-deseq2 1.34.0+dfsg-1 MIGRATED to testing (Debian testing watch)
[2021-11-26] Accepted r-bioc-deseq2 1.34.0+dfsg-1 (source) into unstable (Andreas Tille)

bugs [bug history graph]

all: 0

links

homepage
lintian (0, 2)
buildd: logs, cross
popcon
browse source code
other distros
debian patches
debci

ubuntu

[Information about Ubuntu for Debian Developers]

version: 1.52.0+dfsg-1