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r-bioc-fishpond

Differential transcript and gene expression with inferential replicates

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general
  • source: r-bioc-fishpond (main)
  • version: 2.12.0+ds-3
  • maintainer: Debian R Packages Maintainers (archive) (DMD) (LowNMU)
  • uploaders: Steffen Moeller [DMD]
  • arch: all
  • std-ver: 4.7.3
  • VCS: Git (Browse, QA)
versions [more versions can be listed by madison] [old versions available from snapshot.debian.org]
[pool directory]
  • oldstable: 2.4.1+ds-1
  • stable: 2.12.0+ds-2
  • unstable: 2.12.0+ds-3
versioned links
  • 2.4.1+ds-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
  • 2.12.0+ds-2: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
  • 2.12.0+ds-3: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
binaries
  • r-bioc-fishpond
action needed
Debci reports failed tests high
  • unstable: pass (log)
    The tests ran in 0:01:32
    Last run: 2026-03-23T13:08:33.000Z
    Previous status: unknown

  • testing: fail (log)
    The tests ran in 0:00:11
    Last run: 2025-11-27T15:43:17.000Z
    Previous status: unknown

  • stable: pass (log)
    The tests ran in 0:01:23
    Last run: 2025-11-09T13:47:22.000Z
    Previous status: unknown

Created: 2025-11-27 Last update: 2026-03-25 22:02
A new upstream version is available: 2.16.0 high
A new upstream version 2.16.0 is available, you should consider packaging it.
Created: 2026-03-15 Last update: 2026-03-25 17:32
Failed to analyze the VCS repository. Please troubleshoot and fix the issue. high
vcswatch reports that there is an error with this package's VCS, or the debian/changelog file inside it. Please check the error shown below and try to fix it. You might have to update the VCS URL in the debian/control file to point to the correct repository.

fatal: unable to access 'https://salsa.debian.org/r-pkg-team/r-bioc-fishpond.git/': The requested URL returned error: 503
Created: 2026-03-22 Last update: 2026-03-22 21:33
The package has not entered testing even though the delay is over normal
The package has not entered testing even though the 2-day delay is over. Check why.
Created: 2026-03-17 Last update: 2026-03-25 22:01
testing migrations
  • excuses:
    • Migrates after: r-bioc-biocgenerics, r-bioc-genomicranges, r-bioc-iranges, r-bioc-qvalue, r-bioc-s4vectors, r-bioc-singlecellexperiment, r-bioc-summarizedexperiment
    • Migration status for r-bioc-fishpond (- to 2.12.0+ds-3): BLOCKED: Rejected/violates migration policy/introduces a regression
    • Issues preventing migration:
    • ∙ ∙ Build-Depends(-Arch): r-bioc-fishpond r-bioc-genomicranges
    • ∙ ∙ Build-Depends(-Arch): r-bioc-fishpond r-bioc-iranges (not considered)
    • ∙ ∙ Build-Depends(-Arch): r-bioc-fishpond r-bioc-qvalue (not considered)
    • ∙ ∙ Build-Depends(-Arch): r-bioc-fishpond r-bioc-s4vectors (not considered)
    • ∙ ∙ Build-Depends(-Arch): r-bioc-fishpond r-bioc-singlecellexperiment
    • ∙ ∙ Build-Depends(-Arch): r-bioc-fishpond r-bioc-summarizedexperiment
    • ∙ ∙ Depends: r-bioc-fishpond r-bioc-biocgenerics (not considered)
    • ∙ ∙ Depends: r-bioc-fishpond r-bioc-genomicranges
    • ∙ ∙ Depends: r-bioc-fishpond r-bioc-iranges (not considered)
    • ∙ ∙ Depends: r-bioc-fishpond r-bioc-qvalue (not considered)
    • ∙ ∙ Depends: r-bioc-fishpond r-bioc-s4vectors (not considered)
    • ∙ ∙ Depends: r-bioc-fishpond r-bioc-singlecellexperiment
    • ∙ ∙ Depends: r-bioc-fishpond r-bioc-summarizedexperiment
    • Additional info (not blocking):
    • ∙ ∙ Piuparts tested OK - https://piuparts.debian.org/sid/source/r/r-bioc-fishpond.html
    • ∙ ∙ Autopkgtest skipped on i386: not installable (which is allowed)
    • ∙ ∙ Autopkgtest skipped on s390x: not installable (which is allowed)
    • ∙ ∙ Autopkgtest for r-bioc-fishpond/2.12.0+ds-3: amd64: Pass, arm64: Pass, ppc64el: Pass, riscv64: Pass
    • ∙ ∙ Reproduced on amd64
    • ∙ ∙ Reproduced on arm64
    • ∙ ∙ Reproduced on armhf
    • ∙ ∙ Reproduced on i386
    • ∙ ∙ Reproduced on ppc64el
    • ∙ ∙ Required age reduced by 3 days because of autopkgtest
    • ∙ ∙ 11 days old (needed 2 days)
    • ∙ ∙ Remove hint for (transitive) dependency: r-cran-ggplot2, r-cran-isoband
    • Not considered
news
[rss feed]
  • [2026-03-15] Accepted r-bioc-fishpond 2.12.0+ds-3 (source) into unstable (Charles Plessy)
  • [2025-11-24] r-bioc-fishpond REMOVED from testing (Debian testing watch)
  • [2025-01-22] r-bioc-fishpond 2.12.0+ds-2 MIGRATED to testing (Debian testing watch)
  • [2025-01-21] r-bioc-fishpond REMOVED from testing (Debian testing watch)
  • [2025-01-13] Accepted r-bioc-fishpond 2.12.0+ds-2 (source) into unstable (Michael R. Crusoe)
  • [2024-11-29] Accepted r-bioc-fishpond 2.12.0+ds-1 (source) into experimental (Michael R. Crusoe)
  • [2024-09-10] r-bioc-fishpond 2.10.0+ds-1 MIGRATED to testing (Debian testing watch)
  • [2024-08-18] Accepted r-bioc-fishpond 2.10.0+ds-1 (source) into unstable (Michael R. Crusoe)
  • [2024-08-06] Accepted r-bioc-fishpond 2.10.0+ds-1~0exp1 (source) into experimental (Michael R. Crusoe)
  • [2024-07-14] Accepted r-bioc-fishpond 2.10.0+ds-1~0exp (source) into experimental (Michael R. Crusoe)
  • [2024-06-25] r-bioc-fishpond REMOVED from testing (Debian testing watch)
  • [2023-12-17] r-bioc-fishpond 2.8.0+ds-1 MIGRATED to testing (Debian testing watch)
  • [2023-11-30] Accepted r-bioc-fishpond 2.8.0+ds-1 (source) into unstable (Andreas Tille)
  • [2023-08-19] r-bioc-fishpond 2.6.2+ds-1 MIGRATED to testing (Debian testing watch)
  • [2023-07-26] Accepted r-bioc-fishpond 2.6.2+ds-1 (source) into unstable (Andreas Tille)
  • [2023-07-14] r-bioc-fishpond REMOVED from testing (Debian testing watch)
  • [2023-02-01] r-bioc-fishpond 2.4.1+ds-1 MIGRATED to testing (Debian testing watch)
  • [2023-01-30] Accepted r-bioc-fishpond 2.4.1+ds-1 (source) into unstable (Andreas Tille)
  • [2022-12-05] r-bioc-fishpond 2.4.0+ds-1 MIGRATED to testing (Debian testing watch)
  • [2022-12-04] r-bioc-fishpond REMOVED from testing (Debian testing watch)
  • [2022-11-21] Accepted r-bioc-fishpond 2.4.0+ds-1 (source) into unstable (Andreas Tille)
  • [2022-05-24] r-bioc-fishpond 2.2.0+ds-2 MIGRATED to testing (Debian testing watch)
  • [2022-05-24] r-bioc-fishpond 2.2.0+ds-2 MIGRATED to testing (Debian testing watch)
  • [2022-05-18] Accepted r-bioc-fishpond 2.2.0+ds-2 (source) into unstable (Nilesh Patra)
  • [2022-05-16] Accepted r-bioc-fishpond 2.2.0+ds-1 (source) into unstable (Andreas Tille)
  • [2021-12-14] r-bioc-fishpond 2.0.1+ds-2 MIGRATED to testing (Debian testing watch)
  • [2021-12-11] Accepted r-bioc-fishpond 2.0.1+ds-2 (source) into unstable (Nilesh Patra)
  • [2021-12-11] Accepted r-bioc-fishpond 2.0.1+ds-1 (source amd64) into unstable, unstable (Debian FTP Masters) (signed by: Nilesh Patra)
bugs [bug history graph]
  • all: 0
links
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  • version: 2.12.0+ds-2

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