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r-bioc-genomicfeatures

GNU R tools for making and manipulating transcript centric annotations

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general
  • source: r-bioc-genomicfeatures (main)
  • version: 1.58.0+dfsg-2
  • maintainer: Debian R Packages Maintainers (archive) (DMD) (LowNMU)
  • uploaders: Andreas Tille [DMD]
  • arch: all
  • std-ver: 4.7.0
  • VCS: Git (Browse, QA)
versions [more versions can be listed by madison] [old versions available from snapshot.debian.org]
[pool directory]
  • o-o-stable: 1.42.1+dfsg-1
  • oldstable: 1.50.4+dfsg-1
  • stable: 1.58.0+dfsg-2
  • unstable: 1.58.0+dfsg-2
versioned links
  • 1.42.1+dfsg-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
  • 1.50.4+dfsg-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
  • 1.58.0+dfsg-2: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
binaries
  • r-bioc-genomicfeatures
action needed
Debci reports failed tests high
  • unstable: pass (log)
    The tests ran in 0:01:07
    Last run: 2025-11-06T01:45:03.000Z
    Previous status: unknown

  • testing: fail (log)
    The tests ran in 0:00:19
    Last run: 2025-11-26T11:15:22.000Z
    Previous status: unknown

  • stable: pass (log)
    The tests ran in 0:00:59
    Last run: 2025-11-08T19:51:20.000Z
    Previous status: unknown

Created: 2025-11-26 Last update: 2025-12-02 08:32
A new upstream version is available: 1.62.0 high
A new upstream version 1.62.0 is available, you should consider packaging it.
Created: 2025-11-27 Last update: 2025-12-02 03:47
debian/patches: 1 patch with invalid metadata high

Among the 1 debian patch available in version 1.58.0+dfsg-2 of the package, we noticed the following issues:

  • 1 patch with invalid metadata that ought to be fixed.
Created: 2023-02-26 Last update: 2025-01-14 11:00
The package has not entered testing even though the delay is over normal
The package has not entered testing even though the 2-day delay is over. Check why.
Created: 2025-11-23 Last update: 2025-12-02 08:30
lintian reports 2 warnings normal
Lintian reports 2 warnings about this package. You should make the package lintian clean getting rid of them.
Created: 2024-02-05 Last update: 2024-08-20 11:51
Standards version of the package is outdated. wishlist
The package should be updated to follow the last version of Debian Policy (Standards-Version 4.7.2 instead of 4.7.0).
Created: 2025-02-21 Last update: 2025-02-27 13:25
testing migrations
  • excuses:
    • Migration status: Blocked. Can't migrate due to a non-migratable dependency. Check status below.
    • Blocked by: r-bioc-genomeinfodb
    • Migrates after: r-bioc-annotationdbi, r-bioc-biostrings, r-bioc-genomicranges, r-bioc-rtracklayer
    • Migration status for r-bioc-genomicfeatures (- to 1.58.0+dfsg-2): BLOCKED: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
    • Issues preventing migration:
    • ∙ ∙ Build-Depends(-Arch): r-bioc-genomicfeatures r-bioc-genomeinfodb (not considered)
    • ∙ ∙ Depends: r-bioc-genomicfeatures r-bioc-genomeinfodb (not considered)
    • ∙ ∙ Invalidated by build-dependency
    • ∙ ∙ Invalidated by dependency
    • ∙ ∙ Build-Depends(-Arch): r-bioc-genomicfeatures r-bioc-annotationdbi
    • ∙ ∙ Build-Depends(-Arch): r-bioc-genomicfeatures r-bioc-biostrings
    • ∙ ∙ Build-Depends(-Arch): r-bioc-genomicfeatures r-bioc-genomicranges
    • ∙ ∙ Build-Depends(-Arch): r-bioc-genomicfeatures r-bioc-rtracklayer
    • ∙ ∙ Depends: r-bioc-genomicfeatures r-bioc-annotationdbi
    • ∙ ∙ Depends: r-bioc-genomicfeatures r-bioc-biostrings
    • ∙ ∙ Depends: r-bioc-genomicfeatures r-bioc-genomicranges
    • ∙ ∙ Depends: r-bioc-genomicfeatures r-bioc-rtracklayer
    • Additional info (not blocking):
    • ∙ ∙ Piuparts tested OK - https://piuparts.debian.org/sid/source/r/r-bioc-genomicfeatures.html
    • ∙ ∙ Autopkgtest skipped on i386: not installable (which is allowed)
    • ∙ ∙ Autopkgtest for r-bioc-genomicfeatures/1.58.0+dfsg-2: amd64: Pass, arm64: Pass, ppc64el: Pass, riscv64: Pass, s390x: Pass
    • ∙ ∙ New but not reproducible on amd64 - info ♻
    • ∙ ∙ New but not reproducible on arm64 - info ♻
    • ∙ ∙ Required age reduced by 3 days because of autopkgtest
    • ∙ ∙ 322 days old (needed 2 days)
    • Not considered
news
[rss feed]
  • [2025-11-24] r-bioc-genomicfeatures REMOVED from testing (Debian testing watch)
  • [2025-01-22] r-bioc-genomicfeatures 1.58.0+dfsg-2 MIGRATED to testing (Debian testing watch)
  • [2025-01-21] r-bioc-genomicfeatures REMOVED from testing (Debian testing watch)
  • [2025-01-13] Accepted r-bioc-genomicfeatures 1.58.0+dfsg-2 (source) into unstable (Michael R. Crusoe)
  • [2024-11-29] Accepted r-bioc-genomicfeatures 1.58.0+dfsg-1 (source) into experimental (Michael R. Crusoe)
  • [2024-09-10] r-bioc-genomicfeatures 1.56.0+dfsg-1 MIGRATED to testing (Debian testing watch)
  • [2024-08-18] Accepted r-bioc-genomicfeatures 1.56.0+dfsg-1 (source) into unstable (Michael R. Crusoe)
  • [2024-07-23] Accepted r-bioc-genomicfeatures 1.56.0+dfsg-1~0exp1 (source) into experimental (Michael R. Crusoe)
  • [2024-07-14] Accepted r-bioc-genomicfeatures 1.56.0+dfsg-1~0exp (source) into experimental (Michael R. Crusoe)
  • [2024-06-25] r-bioc-genomicfeatures REMOVED from testing (Debian testing watch)
  • [2024-04-26] r-bioc-genomicfeatures 1.54.3+dfsg-1 MIGRATED to testing (Debian testing watch)
  • [2024-04-26] r-bioc-genomicfeatures 1.54.3+dfsg-1 MIGRATED to testing (Debian testing watch)
  • [2024-04-26] r-bioc-genomicfeatures 1.54.3+dfsg-1 MIGRATED to testing (Debian testing watch)
  • [2024-03-22] r-bioc-genomicfeatures REMOVED from testing (Debian testing watch)
  • [2024-02-08] r-bioc-genomicfeatures 1.54.3+dfsg-1 MIGRATED to testing (Debian testing watch)
  • [2024-02-05] Accepted r-bioc-genomicfeatures 1.54.3+dfsg-1 (source) into unstable (Andreas Tille)
  • [2023-12-17] r-bioc-genomicfeatures 1.54.1+dfsg-1 MIGRATED to testing (Debian testing watch)
  • [2023-12-01] Accepted r-bioc-genomicfeatures 1.54.1+dfsg-1 (source) into unstable (Charles Plessy)
  • [2023-10-14] r-bioc-genomicfeatures 1.52.2+dfsg-1 MIGRATED to testing (Debian testing watch)
  • [2023-10-14] r-bioc-genomicfeatures 1.52.2+dfsg-1 MIGRATED to testing (Debian testing watch)
  • [2023-08-29] Accepted r-bioc-genomicfeatures 1.52.2+dfsg-1 (source) into unstable (Charles Plessy)
  • [2023-07-27] Accepted r-bioc-genomicfeatures 1.52.1+dfsg-1 (source) into unstable (Andreas Tille)
  • [2023-07-14] r-bioc-genomicfeatures REMOVED from testing (Debian testing watch)
  • [2023-02-04] r-bioc-genomicfeatures 1.50.4+dfsg-1 MIGRATED to testing (Debian testing watch)
  • [2023-01-30] Accepted r-bioc-genomicfeatures 1.50.4+dfsg-1 (source) into unstable (Andreas Tille)
  • [2022-12-25] r-bioc-genomicfeatures 1.50.3+dfsg-1 MIGRATED to testing (Debian testing watch)
  • [2022-12-25] r-bioc-genomicfeatures 1.50.3+dfsg-1 MIGRATED to testing (Debian testing watch)
  • [2022-12-19] Accepted r-bioc-genomicfeatures 1.50.3+dfsg-1 (source) into unstable (Andreas Tille)
  • [2022-12-06] r-bioc-genomicfeatures 1.50.2+dfsg-1 MIGRATED to testing (Debian testing watch)
  • [2022-12-05] r-bioc-genomicfeatures REMOVED from testing (Debian testing watch)
  • 1
  • 2
bugs [bug history graph]
  • all: 0
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  • version: 1.58.0+dfsg-2

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