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r-bioc-rsamtools

GNU R binary alignment (BAM), variant call (BCF), or tabix file import

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general

source: r-bioc-rsamtools (main)
version: 2.22.0+dfsg-2
maintainer: Debian R Packages Maintainers (archive) (DMD) (LowNMU)
uploaders: Andreas Tille [DMD]
arch: any
std-ver: 4.7.0
VCS: Git (Browse, QA)

versions [more versions can be listed by madison] [old versions available from snapshot.debian.org]

[pool directory]

oldstable: 2.6.0-1
stable: 2.14.0-1
testing: 2.22.0+dfsg-2
unstable: 2.22.0+dfsg-2

versioned links

2.6.0-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
2.14.0-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
2.22.0+dfsg-2: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]

binaries

r-bioc-rsamtools

action needed

Debci reports failed tests high

unstable: pass (log)
The tests ran in 0:01:32
Last run: 2025-07-05T07:33:36.000Z
Previous status: unknown

testing: pass (log)
The tests ran in 0:01:42
Last run: 2025-06-25T09:26:58.000Z
Previous status: unknown

stable: fail (log)
The tests ran in 0:01:42
Last run: 2025-07-28T04:27:16.000Z
Previous status: unknown

Created: 2019-02-07 Last update: 2025-07-30 09:01

A new upstream version is available: 2.24.0 high

A new upstream version 2.24.0 is available, you should consider packaging it.

Created: 2025-04-18 Last update: 2025-07-30 04:05

debian/patches: 2 patches to forward upstream low

Among the 2 debian patches available in version 2.22.0+dfsg-2 of the package, we noticed the following issues:

2 patches where the metadata indicates that the patch has not yet been forwarded upstream. You should either forward the patch upstream or update the metadata to document its real status.

Created: 2023-02-26 Last update: 2025-01-13 09:02

Standards version of the package is outdated. wishlist

The package should be updated to follow the last version of Debian Policy (Standards-Version 4.7.2 instead of 4.7.0).

Created: 2025-02-21 Last update: 2025-02-27 13:25

news

[2025-01-22] r-bioc-rsamtools 2.22.0+dfsg-2 MIGRATED to testing (Debian testing watch)
[2025-01-21] r-bioc-rsamtools REMOVED from testing (Debian testing watch)
[2025-01-12] Accepted r-bioc-rsamtools 2.22.0+dfsg-2 (source) into unstable (Michael R. Crusoe)
[2024-11-28] Accepted r-bioc-rsamtools 2.22.0+dfsg-1 (source) into experimental (Michael R. Crusoe)
[2024-09-10] r-bioc-rsamtools 2.20.0+dfsg-1 MIGRATED to testing (Debian testing watch)
[2024-08-17] Accepted r-bioc-rsamtools 2.20.0+dfsg-1 (source) into unstable (Michael R. Crusoe)
[2024-07-23] Accepted r-bioc-rsamtools 2.20.0+dfsg-1~1exp (source) into experimental (Michael R. Crusoe)
[2024-07-15] Accepted r-bioc-rsamtools 2.20.0+dfsg-1~0exq (source) into experimental (Michael R. Crusoe)
[2024-07-14] Accepted r-bioc-rsamtools 2.20.0+dfsg-1~0exp (source) into experimental (Michael R. Crusoe)
[2024-06-25] r-bioc-rsamtools REMOVED from testing (Debian testing watch)
[2024-04-26] r-bioc-rsamtools 2.18.0+dfsg-1 MIGRATED to testing (Debian testing watch)
[2024-04-09] r-bioc-rsamtools REMOVED from testing (Debian testing watch)
[2023-12-17] r-bioc-rsamtools 2.18.0+dfsg-1 MIGRATED to testing (Debian testing watch)
[2023-11-30] Accepted r-bioc-rsamtools 2.18.0+dfsg-1 (source) into unstable (Andreas Tille)
[2023-10-14] r-bioc-rsamtools 2.16.0+dfsg-2 MIGRATED to testing (Debian testing watch)
[2023-10-10] Accepted r-bioc-rsamtools 2.16.0+dfsg-2 (source) into unstable (Andreas Tille)
[2023-10-09] Accepted r-bioc-rsamtools 2.16.0+dfsg-1 (source) into unstable (Andreas Tille)
[2023-07-21] Accepted r-bioc-rsamtools 2.16.0-1 (source) into unstable (Andreas Tille)
[2023-07-14] r-bioc-rsamtools REMOVED from testing (Debian testing watch)
[2022-12-05] r-bioc-rsamtools 2.14.0-1 MIGRATED to testing (Debian testing watch)
[2022-11-21] Accepted r-bioc-rsamtools 2.14.0-1 (source) into unstable (Andreas Tille)
[2022-05-24] r-bioc-rsamtools 2.12.0-1 MIGRATED to testing (Debian testing watch)
[2022-05-15] Accepted r-bioc-rsamtools 2.12.0-1 (source) into unstable (Andreas Tille)
[2021-12-03] r-bioc-rsamtools 2.10.0-1 MIGRATED to testing (Debian testing watch)
[2021-11-25] Accepted r-bioc-rsamtools 2.10.0-1 (source) into unstable (Andreas Tille)
[2021-09-29] r-bioc-rsamtools 2.8.0-1 MIGRATED to testing (Debian testing watch)
[2021-09-06] Accepted r-bioc-rsamtools 2.8.0-1 (source) into unstable (Andreas Tille)
[2020-11-23] r-bioc-rsamtools 2.6.0-1 MIGRATED to testing (Debian testing watch)
[2020-11-02] Accepted r-bioc-rsamtools 2.6.0-1 (source) into unstable (Andreas Tille)
[2020-05-29] r-bioc-rsamtools 2.4.0-1 MIGRATED to testing (Debian testing watch)

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bugs [bug history graph]

all: 0

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version: 2.22.0+dfsg-2

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