r-bioc-genomicalignments - Debian Package Tracker

general

source: r-bioc-genomicalignments (main)
version: 1.42.0-3
maintainer: Debian R Packages Maintainers (archive) (DMD) (LowNMU)
uploaders: Andreas Tille [DMD] – Charles Plessy [DMD]
arch: any
std-ver: 4.7.3
VCS: Git (Browse, QA)

versions [more versions can be listed by madison] [old versions available from snapshot.debian.org]

[pool directory]

o-o-stable: 1.26.0-1
oldstable: 1.34.0-1
stable: 1.42.0-2
unstable: 1.42.0-3

versioned links

1.26.0-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
1.34.0-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
1.42.0-2: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
1.42.0-3: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]

binaries

r-bioc-genomicalignments

action needed

source package has 2 unsatisfiable build dependencies high

Build dependencies in unstable cannot be satisfied on i386, armhf, and s390x because: unsatisfied dependency on r-pkg-team-core-architecture
Build dependencies in unstable cannot be satisfied on loong64, riscv64, arm64, amd64, and ppc64el because: unsatisfied dependency on r-api-bioc-3.20

Created: 2026-07-11 Last update: 2026-07-14 02:01

1 binary package has unsatisfiable dependencies high

The dependencies of r-bioc-genomicalignments=1.42.0-3 cannot be satisfied in unstable on loong64, riscv64, arm64, amd64, and ppc64el because: unsatisfied dependency on r-api-bioc-3.20

Created: 2026-07-11 Last update: 2026-07-14 02:01

A new upstream version is available: 1.48.0 high

A new upstream version 1.48.0 is available, you should consider packaging it.

Created: 2025-11-27 Last update: 2026-07-14 01:33

Debci reports failed tests high

unstable: pass (log)
The tests ran in 0:01:40
Last run: 2026-05-27T14:12:17.000Z
Previous status: unknown

testing: fail (log)
The tests ran in 0:00:20
Last run: 2025-11-27T20:41:35.000Z
Previous status: unknown

stable: pass (log)
The tests ran in 0:02:08
Last run: 2025-11-09T08:40:56.000Z
Previous status: unknown

Created: 2025-11-27 Last update: 2026-07-14 01:00

The package has not entered testing even though the delay is over normal

The package has not entered testing even though the 5-day delay is over. Check why.

Created: 2026-04-13 Last update: 2026-07-14 01:32

debian/patches: 1 patch to forward upstream low

Among the 1 debian patch available in version 1.42.0-3 of the package, we noticed the following issues:

1 patch where the metadata indicates that the patch has not yet been forwarded upstream. You should either forward the patch upstream or update the metadata to document its real status.

Created: 2023-02-26 Last update: 2026-03-15 12:31

Standards version of the package is outdated. wishlist

The package should be updated to follow the last version of Debian Policy (Standards-Version 4.7.4 instead of 4.7.3).

Created: 2026-03-31 Last update: 2026-03-31 15:01

testing migrations

This package is part of the ongoing testing transition known as r-api-bioc-3.23. Please avoid uploads unrelated to this transition, they would likely delay it and require supplementary work from the release managers. On the other hand, if your package has problems preventing it to migrate to testing, please fix them as soon as possible. You can probably find supplementary information in the debian-release archives or in the corresponding release.debian.org bug.
excuses:
- Migrates after: r-bioc-biocgenerics, r-bioc-biocparallel, r-bioc-biostrings, r-bioc-genomeinfodb, r-bioc-genomicranges, r-bioc-iranges, r-bioc-rsamtools, r-bioc-s4vectors, r-bioc-summarizedexperiment
- Migration status for r-bioc-genomicalignments (- to 1.42.0-3): BLOCKED: Rejected/violates migration policy/introduces a regression
- Issues preventing migration:
- ∙ ∙ r-bioc-genomicalignments/amd64 has unsatisfiable dependency
- ∙ ∙ r-bioc-genomicalignments/arm64 has unsatisfiable dependency
- ∙ ∙ r-bioc-genomicalignments/loong64 has unsatisfiable dependency
- ∙ ∙ r-bioc-genomicalignments/ppc64el has unsatisfiable dependency
- ∙ ∙ r-bioc-genomicalignments/riscv64 has unsatisfiable dependency
- ∙ ∙ Build-Depends(-Arch): r-bioc-genomicalignments r-bioc-biocgenerics (not considered)
- ∙ ∙ Build-Depends(-Arch): r-bioc-genomicalignments r-bioc-biocparallel (not considered)
- ∙ ∙ Build-Depends(-Arch): r-bioc-genomicalignments r-bioc-biostrings (not considered)
- ∙ ∙ Build-Depends(-Arch): r-bioc-genomicalignments r-bioc-genomeinfodb (not considered)
- ∙ ∙ Build-Depends(-Arch): r-bioc-genomicalignments r-bioc-genomicranges (not considered)
- ∙ ∙ Build-Depends(-Arch): r-bioc-genomicalignments r-bioc-iranges (not considered)
- ∙ ∙ Build-Depends(-Arch): r-bioc-genomicalignments r-bioc-rsamtools (not considered)
- ∙ ∙ Build-Depends(-Arch): r-bioc-genomicalignments r-bioc-s4vectors
- ∙ ∙ Build-Depends(-Arch): r-bioc-genomicalignments r-bioc-summarizedexperiment (not considered)
- Additional info (not blocking):
- ∙ ∙ Piuparts tested OK - https://piuparts.debian.org/sid/source/r/r-bioc-genomicalignments.html
- ∙ ∙ Autopkgtest skipped on amd64: not installable
- ∙ ∙ Autopkgtest skipped on arm64: not installable
- ∙ ∙ Autopkgtest skipped on loong64: not installable
- ∙ ∙ Autopkgtest skipped on ppc64el: not installable
- ∙ ∙ Autopkgtest skipped on riscv64: not installable
- ∙ ∙ Reproduced on amd64 - info
- ∙ ∙ Reproduced on arm64 - info
- ∙ ∙ Reproduced on armhf - info
- ∙ ∙ Reproduced on i386 - info
- ∙ ∙ 121 days old (needed 5 days)
- Not considered

news

[rss feed]

[2026-03-15] Accepted r-bioc-genomicalignments 1.42.0-3 (source) into unstable (Charles Plessy)
[2025-11-24] r-bioc-genomicalignments REMOVED from testing (Debian testing watch)
[2025-01-22] r-bioc-genomicalignments 1.42.0-2 MIGRATED to testing (Debian testing watch)
[2025-01-21] r-bioc-genomicalignments REMOVED from testing (Debian testing watch)
[2025-01-13] Accepted r-bioc-genomicalignments 1.42.0-2 (source) into unstable (Michael R. Crusoe)
[2024-11-28] Accepted r-bioc-genomicalignments 1.42.0-1 (source) into experimental (Michael R. Crusoe)
[2024-09-10] r-bioc-genomicalignments 1.40.0-1 MIGRATED to testing (Debian testing watch)
[2024-08-17] Accepted r-bioc-genomicalignments 1.40.0-1 (source) into unstable (Michael R. Crusoe)
[2024-07-30] Accepted r-bioc-genomicalignments 1.40.0-1~0exp1 (source) into experimental (Michael R. Crusoe)
[2024-07-14] Accepted r-bioc-genomicalignments 1.40.0-1~0exp (source) into experimental (Michael R. Crusoe)
[2024-06-25] r-bioc-genomicalignments REMOVED from testing (Debian testing watch)
[2024-04-26] r-bioc-genomicalignments 1.38.2-1 MIGRATED to testing (Debian testing watch)
[2024-04-09] r-bioc-genomicalignments REMOVED from testing (Debian testing watch)
[2024-01-29] r-bioc-genomicalignments 1.38.2-1 MIGRATED to testing (Debian testing watch)
[2024-01-25] Accepted r-bioc-genomicalignments 1.38.2-1 (source) into unstable (Andreas Tille)
[2024-01-19] r-bioc-genomicalignments 1.38.1-1 MIGRATED to testing (Debian testing watch)
[2024-01-17] Accepted r-bioc-genomicalignments 1.38.1-1 (source) into unstable (Andreas Tille)
[2023-12-17] r-bioc-genomicalignments 1.38.0-1 MIGRATED to testing (Debian testing watch)
[2023-11-30] Accepted r-bioc-genomicalignments 1.38.0-1 (source) into unstable (Andreas Tille)
[2023-10-14] r-bioc-genomicalignments 1.36.0-1 MIGRATED to testing (Debian testing watch)
[2023-07-26] Accepted r-bioc-genomicalignments 1.36.0-1 (source) into unstable (Andreas Tille)
[2023-07-14] r-bioc-genomicalignments REMOVED from testing (Debian testing watch)
[2022-12-05] r-bioc-genomicalignments 1.34.0-1 MIGRATED to testing (Debian testing watch)
[2022-11-21] Accepted r-bioc-genomicalignments 1.34.0-1 (source) into unstable (Andreas Tille)
[2022-07-29] r-bioc-genomicalignments 1.32.1-1 MIGRATED to testing (Debian testing watch)
[2022-07-27] Accepted r-bioc-genomicalignments 1.32.1-1 (source) into unstable (Andreas Tille)
[2022-05-24] r-bioc-genomicalignments 1.32.0-1 MIGRATED to testing (Debian testing watch)
[2022-05-15] Accepted r-bioc-genomicalignments 1.32.0-1 (source) into unstable (Andreas Tille)
[2021-12-03] r-bioc-genomicalignments 1.30.0-1 MIGRATED to testing (Debian testing watch)
[2021-11-25] Accepted r-bioc-genomicalignments 1.30.0-1 (source) into unstable (Nilesh Patra)

bugs [bug history graph]

all: 0

links

homepage
lintian
buildd: logs, debcheck, cross
popcon
browse source code
other distros
debian patches
debci

ubuntu

[Information about Ubuntu for Debian Developers]

version: 1.42.0-3