r-bioc-shortread - Debian Package Tracker

general

source: r-bioc-shortread (main)
version: 1.70.0+ds-1
maintainer: Debian R Packages Maintainers (archive) (DMD) (LowNMU)
uploaders: Andreas Tille [DMD]
arch: any
std-ver: 4.7.4
VCS: Git (Browse, QA)

versions [more versions can be listed by madison] [old versions available from snapshot.debian.org]

[pool directory]

o-o-stable: 1.48.0-2
oldstable: 1.56.1-1
stable: 1.64.0-3
unstable: 1.70.0+ds-1

versioned links

1.48.0-2: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
1.56.1-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
1.64.0-3: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
1.70.0+ds-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]

binaries

r-bioc-shortread

action needed

Debci reports failed tests high

unstable: pass (log)
The tests ran in 0:02:21
Last run: 2026-05-26T11:09:23.000Z
Previous status: unknown

testing: fail (log)
The tests ran in 0:00:20
Last run: 2025-11-26T11:13:55.000Z
Previous status: unknown

stable: pass (log)
The tests ran in 0:01:59
Last run: 2026-07-16T20:43:28.000Z
Previous status: unknown

Created: 2025-11-26 Last update: 2026-10-10 02:01

The package has not entered testing even though the delay is over normal

The package has not entered testing even though the 5-day delay is over. Check why.

Created: 2026-08-16 Last update: 2026-10-10 03:02

version in VCS is newer than in repository, is it time to upload? normal

vcswatch reports that this package seems to have a new changelog entry (version 1.70.0+ds-1.1, distribution UNRELEASED) and new commits in its VCS. You should consider whether it's time to make an upload.

Here are the relevant commit messages:

commit 66b38e5677112d79b40f980d8902ffed0e05b230
Author: Steffen Moeller <moeller@debian.org>
Date:   Mon Aug 10 18:25:52 2026 +0200

    Added configure to Files-Excluded

Created: 2026-08-10 Last update: 2026-10-07 22:50

lintian reports 1 warning normal

Lintian reports 1 warning about this package. You should make the package lintian clean getting rid of them.

Created: 2026-08-11 Last update: 2026-08-11 04:01

testing migrations

excuses:
- Migration status: Blocked. Can't migrate due to a non-migratable dependency. Check status below.
- Blocked by: r-bioc-genomicalignments
- Migrates after: r-bioc-biocparallel, r-bioc-biostrings, r-bioc-genomeinfodb, r-bioc-genomicranges, r-bioc-iranges, r-bioc-pwalign, r-bioc-rsamtools, r-bioc-s4vectors, r-bioc-seqinfo, r-bioc-xvector
- Migration status for r-bioc-shortread (- to 1.70.0+ds-1): BLOCKED: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
- Issues preventing migration:
- ∙ ∙ Build-Depends(-Arch): r-bioc-shortread r-bioc-genomicalignments (not considered)
- ∙ ∙ Depends: r-bioc-shortread r-bioc-genomicalignments (not considered)
- ∙ ∙ Invalidated by build-dependency
- ∙ ∙ Invalidated by dependency
- ∙ ∙ Build-Depends(-Arch): r-bioc-shortread r-bioc-biocparallel (not considered)
- ∙ ∙ Build-Depends(-Arch): r-bioc-shortread r-bioc-biostrings
- ∙ ∙ Build-Depends(-Arch): r-bioc-shortread r-bioc-genomeinfodb (not considered)
- ∙ ∙ Build-Depends(-Arch): r-bioc-shortread r-bioc-genomicranges
- ∙ ∙ Build-Depends(-Arch): r-bioc-shortread r-bioc-iranges (not considered)
- ∙ ∙ Build-Depends(-Arch): r-bioc-shortread r-bioc-pwalign
- ∙ ∙ Build-Depends(-Arch): r-bioc-shortread r-bioc-rsamtools
- ∙ ∙ Build-Depends(-Arch): r-bioc-shortread r-bioc-s4vectors (not considered)
- ∙ ∙ Build-Depends(-Arch): r-bioc-shortread r-bioc-seqinfo
- ∙ ∙ Build-Depends(-Arch): r-bioc-shortread r-bioc-xvector
- ∙ ∙ Depends: r-bioc-shortread r-bioc-biocparallel (not considered)
- ∙ ∙ Depends: r-bioc-shortread r-bioc-biostrings
- ∙ ∙ Depends: r-bioc-shortread r-bioc-genomicranges
- ∙ ∙ Depends: r-bioc-shortread r-bioc-iranges (not considered)
- ∙ ∙ Depends: r-bioc-shortread r-bioc-pwalign
- ∙ ∙ Depends: r-bioc-shortread r-bioc-rsamtools
- ∙ ∙ Depends: r-bioc-shortread r-bioc-s4vectors (not considered)
- ∙ ∙ Depends: r-bioc-shortread r-bioc-seqinfo
- ∙ ∙ Depends: r-bioc-shortread r-bioc-xvector
- Additional info (not blocking):
- ∙ ∙ Piuparts tested OK - https://piuparts.debian.org/sid/source/r/r-bioc-shortread.html
- ∙ ∙ Autopkgtest for r-bioc-shortread/1.70.0+ds-1: amd64: Pass, arm64: Pass, ppc64el: Pass, riscv64: No tests, superficial or marked flaky ♻
- ∙ ∙ Reproduced on amd64 - info
- ∙ ∙ Reproduced on arm64 - info
- ∙ ∙ Reproduced on armhf - info
- ∙ ∙ Reproduced on i386 - info
- ∙ ∙ 60 days old (needed 5 days)
- Not considered

news

[rss feed]

[2026-08-10] Accepted r-bioc-shortread 1.70.0+ds-1 (source amd64) into unstable (Steffen Moeller)
[2026-03-15] Accepted r-bioc-shortread 1.64.0-4 (source) into unstable (Charles Plessy)
[2025-11-24] r-bioc-shortread REMOVED from testing (Debian testing watch)
[2025-02-01] r-bioc-shortread 1.64.0-3 MIGRATED to testing (Debian testing watch)
[2025-01-27] Accepted r-bioc-shortread 1.64.0-3 (source) into unstable (Michael R. Crusoe)
[2025-01-21] r-bioc-shortread REMOVED from testing (Debian testing watch)
[2025-01-13] Accepted r-bioc-shortread 1.64.0-2 (source) into unstable (Michael R. Crusoe)
[2024-11-29] Accepted r-bioc-shortread 1.64.0-1 (source) into experimental (Michael R. Crusoe)
[2024-09-10] r-bioc-shortread 1.62.0-1 MIGRATED to testing (Debian testing watch)
[2024-08-18] Accepted r-bioc-shortread 1.62.0-1 (source) into unstable (Michael R. Crusoe)
[2024-07-23] Accepted r-bioc-shortread 1.62.0-1~0exp1 (source) into experimental (Michael R. Crusoe)
[2024-07-14] Accepted r-bioc-shortread 1.62.0-1~0exp (source) into experimental (Michael R. Crusoe)
[2024-06-25] r-bioc-shortread REMOVED from testing (Debian testing watch)
[2024-04-26] r-bioc-shortread 1.60.0-2 MIGRATED to testing (Debian testing watch)
[2024-04-05] r-bioc-shortread REMOVED from testing (Debian testing watch)
[2023-12-21] r-bioc-shortread 1.60.0-2 MIGRATED to testing (Debian testing watch)
[2023-12-18] Accepted r-bioc-shortread 1.60.0-2 (source) into unstable (Andreas Tille)
[2023-12-01] Accepted r-bioc-shortread 1.60.0-1 (source) into unstable (Andreas Tille)
[2023-07-27] Accepted r-bioc-shortread 1.58.0-1 (source) into unstable (Andreas Tille)
[2023-07-14] r-bioc-shortread REMOVED from testing (Debian testing watch)
[2022-12-05] r-bioc-shortread 1.56.1-1 MIGRATED to testing (Debian testing watch)
[2022-11-21] Accepted r-bioc-shortread 1.56.1-1 (source) into unstable (Andreas Tille)
[2022-05-24] r-bioc-shortread 1.54.0-1 MIGRATED to testing (Debian testing watch)
[2022-05-16] Accepted r-bioc-shortread 1.54.0-1 (source) into unstable (Andreas Tille)
[2021-12-03] r-bioc-shortread 1.52.0-1 MIGRATED to testing (Debian testing watch)
[2021-11-25] Accepted r-bioc-shortread 1.52.0-1 (source) into unstable (Andreas Tille)
[2021-09-29] r-bioc-shortread 1.50.0-1 MIGRATED to testing (Debian testing watch)
[2021-09-07] Accepted r-bioc-shortread 1.50.0-1 (source) into unstable (Andreas Tille)
[2021-02-09] r-bioc-shortread 1.48.0-2 MIGRATED to testing (Debian testing watch)
[2021-02-09] r-bioc-shortread 1.48.0-2 MIGRATED to testing (Debian testing watch)

bugs [bug history graph]

all: 0

links

homepage
lintian (0, 1)
buildd: logs, cross
popcon
browse source code
other distros
debci

ubuntu

[Information about Ubuntu for Debian Developers]

version: 1.70.0+ds-1