Go
Register
|
Log in
Subscribe
r-bioc-shortread
GNU R classes and methods for high-throughput short-read sequencing data
×
Choose email to subscribe with
general
source:
r-bioc-shortread
(
main
)
version:
1.64.0-4
maintainer:
Debian R Packages Maintainers
(
archive
)
(
DMD
)
(
LowNMU
)
uploaders:
Andreas Tille
[
DMD
]
arch:
any
std-ver:
4.7.3
VCS:
Git
(
Browse
,
QA
)
versions
[more versions can be listed by madison]
[old versions available from snapshot.debian.org]
[pool directory]
o-o-stable:
1.48.0-2
oldstable:
1.56.1-1
stable:
1.64.0-3
unstable:
1.64.0-4
versioned links
1.48.0-2:
[.dsc, use dget on this link to retrieve source package]
[changelog]
[copyright]
[rules]
[control]
1.56.1-1:
[.dsc, use dget on this link to retrieve source package]
[changelog]
[copyright]
[rules]
[control]
1.64.0-3:
[.dsc, use dget on this link to retrieve source package]
[changelog]
[copyright]
[rules]
[control]
1.64.0-4:
[.dsc, use dget on this link to retrieve source package]
[changelog]
[copyright]
[rules]
[control]
binaries
r-bioc-shortread
action needed
Debci
reports
failed tests
high
unstable
:
pass
(
log
)
The tests ran in 0:02:09
Last run: 2025-12-18T00:34:25.000Z
Previous status:
unknown
testing
:
fail
(
log
)
The tests ran in 0:00:20
Last run: 2025-11-26T11:13:55.000Z
Previous status:
unknown
stable
:
pass
(
log
)
The tests ran in 0:01:51
Last run: 2025-11-09T07:41:40.000Z
Previous status:
unknown
A new upstream version is available:
1.68.0
high
A new upstream version
1.68.0
is available, you should consider packaging it.
The package has not entered testing even though the delay is over
normal
The package has not entered
testing
even though the 5-day delay is over.
Check why
.
lintian reports
1 warning
normal
Lintian reports
1 warning
about this package. You should make the package
lintian clean
getting rid of them.
testing migrations
excuses
:
Migration status: Blocked. Can't migrate due to a non-migratable dependency. Check status below.
Blocked by:
r-bioc-genomicalignments
Migrates after:
r-bioc-biobase
,
r-bioc-biocgenerics
,
r-bioc-biocparallel
,
r-bioc-biostrings
,
r-bioc-genomeinfodb
,
r-bioc-genomicranges
,
r-bioc-iranges
,
r-bioc-pwalign
,
r-bioc-rhtslib
,
r-bioc-rsamtools
,
r-bioc-s4vectors
,
r-bioc-xvector
Migration status for r-bioc-shortread (- to 1.64.0-4): BLOCKED: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
Issues preventing migration:
∙ ∙ Build-Depends(-Arch): r-bioc-shortread
r-bioc-genomicalignments
(not considered)
∙ ∙ Depends: r-bioc-shortread
r-bioc-genomicalignments
(not considered)
∙ ∙ Invalidated by build-dependency
∙ ∙ Invalidated by dependency
∙ ∙ Build-Depends(-Arch): r-bioc-shortread
r-bioc-biobase
∙ ∙ Build-Depends(-Arch): r-bioc-shortread
r-bioc-biocgenerics
(not considered)
∙ ∙ Build-Depends(-Arch): r-bioc-shortread
r-bioc-biocparallel
∙ ∙ Build-Depends(-Arch): r-bioc-shortread
r-bioc-biostrings
∙ ∙ Build-Depends(-Arch): r-bioc-shortread
r-bioc-genomeinfodb
(not considered)
∙ ∙ Build-Depends(-Arch): r-bioc-shortread
r-bioc-genomicranges
∙ ∙ Build-Depends(-Arch): r-bioc-shortread
r-bioc-iranges
(not considered)
∙ ∙ Build-Depends(-Arch): r-bioc-shortread
r-bioc-pwalign
∙ ∙ Build-Depends(-Arch): r-bioc-shortread
r-bioc-rhtslib
∙ ∙ Build-Depends(-Arch): r-bioc-shortread
r-bioc-rsamtools
∙ ∙ Build-Depends(-Arch): r-bioc-shortread
r-bioc-s4vectors
(not considered)
∙ ∙ Build-Depends(-Arch): r-bioc-shortread
r-bioc-xvector
∙ ∙ Depends: r-bioc-shortread
r-bioc-biobase
∙ ∙ Depends: r-bioc-shortread
r-bioc-biocgenerics
(not considered)
∙ ∙ Depends: r-bioc-shortread
r-bioc-biocparallel
∙ ∙ Depends: r-bioc-shortread
r-bioc-biostrings
∙ ∙ Depends: r-bioc-shortread
r-bioc-genomeinfodb
(not considered)
∙ ∙ Depends: r-bioc-shortread
r-bioc-genomicranges
∙ ∙ Depends: r-bioc-shortread
r-bioc-iranges
(not considered)
∙ ∙ Depends: r-bioc-shortread
r-bioc-pwalign
∙ ∙ Depends: r-bioc-shortread
r-bioc-rhtslib
∙ ∙ Depends: r-bioc-shortread
r-bioc-rsamtools
∙ ∙ Depends: r-bioc-shortread
r-bioc-s4vectors
(not considered)
∙ ∙ Depends: r-bioc-shortread
r-bioc-xvector
Additional info (not blocking):
∙ ∙ Piuparts tested OK -
https://piuparts.debian.org/sid/source/r/r-bioc-shortread.html
∙ ∙ Autopkgtest for
r-bioc-shortread
/1.64.0-4:
amd64
:
Pass
,
arm64
:
Pass
,
ppc64el
:
Pass
,
riscv64
:
No tests, superficial or marked flaky
♻
∙ ∙ Reproduced on amd64
∙ ∙ Reproducibility check waiting for results on arm64
∙ ∙ Reproduced on armhf
∙ ∙ Reproduced on i386
∙ ∙ Reproducibility check waiting for results on ppc64el
∙ ∙ 6 days old (needed 5 days)
Not considered
news
[rss feed]
[
2026-03-15
]
Accepted r-bioc-shortread 1.64.0-4 (source) into unstable
(
Charles Plessy
)
[
2025-11-24
]
r-bioc-shortread REMOVED from testing
(
Debian testing watch
)
[
2025-02-01
]
r-bioc-shortread 1.64.0-3 MIGRATED to testing
(
Debian testing watch
)
[
2025-01-27
]
Accepted r-bioc-shortread 1.64.0-3 (source) into unstable
(
Michael R. Crusoe
)
[
2025-01-21
]
r-bioc-shortread REMOVED from testing
(
Debian testing watch
)
[
2025-01-13
]
Accepted r-bioc-shortread 1.64.0-2 (source) into unstable
(
Michael R. Crusoe
)
[
2024-11-29
]
Accepted r-bioc-shortread 1.64.0-1 (source) into experimental
(
Michael R. Crusoe
)
[
2024-09-10
]
r-bioc-shortread 1.62.0-1 MIGRATED to testing
(
Debian testing watch
)
[
2024-08-18
]
Accepted r-bioc-shortread 1.62.0-1 (source) into unstable
(
Michael R. Crusoe
)
[
2024-07-23
]
Accepted r-bioc-shortread 1.62.0-1~0exp1 (source) into experimental
(
Michael R. Crusoe
)
[
2024-07-14
]
Accepted r-bioc-shortread 1.62.0-1~0exp (source) into experimental
(
Michael R. Crusoe
)
[
2024-06-25
]
r-bioc-shortread REMOVED from testing
(
Debian testing watch
)
[
2024-04-26
]
r-bioc-shortread 1.60.0-2 MIGRATED to testing
(
Debian testing watch
)
[
2024-04-05
]
r-bioc-shortread REMOVED from testing
(
Debian testing watch
)
[
2023-12-21
]
r-bioc-shortread 1.60.0-2 MIGRATED to testing
(
Debian testing watch
)
[
2023-12-18
]
Accepted r-bioc-shortread 1.60.0-2 (source) into unstable
(
Andreas Tille
)
[
2023-12-01
]
Accepted r-bioc-shortread 1.60.0-1 (source) into unstable
(
Andreas Tille
)
[
2023-07-27
]
Accepted r-bioc-shortread 1.58.0-1 (source) into unstable
(
Andreas Tille
)
[
2023-07-14
]
r-bioc-shortread REMOVED from testing
(
Debian testing watch
)
[
2022-12-05
]
r-bioc-shortread 1.56.1-1 MIGRATED to testing
(
Debian testing watch
)
[
2022-11-21
]
Accepted r-bioc-shortread 1.56.1-1 (source) into unstable
(
Andreas Tille
)
[
2022-05-24
]
r-bioc-shortread 1.54.0-1 MIGRATED to testing
(
Debian testing watch
)
[
2022-05-16
]
Accepted r-bioc-shortread 1.54.0-1 (source) into unstable
(
Andreas Tille
)
[
2021-12-03
]
r-bioc-shortread 1.52.0-1 MIGRATED to testing
(
Debian testing watch
)
[
2021-11-25
]
Accepted r-bioc-shortread 1.52.0-1 (source) into unstable
(
Andreas Tille
)
[
2021-09-29
]
r-bioc-shortread 1.50.0-1 MIGRATED to testing
(
Debian testing watch
)
[
2021-09-07
]
Accepted r-bioc-shortread 1.50.0-1 (source) into unstable
(
Andreas Tille
)
[
2021-02-09
]
r-bioc-shortread 1.48.0-2 MIGRATED to testing
(
Debian testing watch
)
[
2021-02-09
]
r-bioc-shortread 1.48.0-2 MIGRATED to testing
(
Debian testing watch
)
[
2021-02-07
]
Accepted r-bioc-shortread 1.48.0-2 (source) into unstable
(
Andreas Tille
)
1
2
bugs
[bug history graph]
all:
0
links
homepage
lintian
(
0
,
1
)
buildd:
logs
,
cross
popcon
browse source code
edit tags
other distros
debci
ubuntu
[Information about Ubuntu for Debian Developers]
version:
1.64.0-3
![[bug history graph]](https://qa.debian.org/data/bts/graphs/r/r-bioc-shortread.png){kind=link}