r-bioc-shortread - Debian Package Tracker

general

source: r-bioc-shortread (main)
version: 1.70.0+ds-1
maintainer: Debian R Packages Maintainers (archive) (DMD) (LowNMU)
uploaders: Andreas Tille [DMD]
arch: any
std-ver: 4.7.4
VCS: Git (Browse, QA)

versions [more versions can be listed by madison] [old versions available from snapshot.debian.org]

[pool directory]

o-o-stable: 1.48.0-2
oldstable: 1.56.1-1
stable: 1.64.0-3
unstable: 1.70.0+ds-1

versioned links

1.48.0-2: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
1.56.1-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
1.64.0-3: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
1.64.0-4: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
1.70.0+ds-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]

binaries

r-bioc-shortread

action needed

Debci reports failed tests high

unstable: pass (log)
The tests ran in 0:02:21
Last run: 2026-05-26T11:09:23.000Z
Previous status: unknown

testing: fail (log)
The tests ran in 0:00:20
Last run: 2025-11-26T11:13:55.000Z
Previous status: unknown

stable: pass (log)
The tests ran in 0:01:59
Last run: 2026-07-16T20:43:28.000Z
Previous status: unknown

Created: 2025-11-26 Last update: 2026-08-12 21:35

lintian reports 1 warning normal

Lintian reports 1 warning about this package. You should make the package lintian clean getting rid of them.

Created: 2026-08-11 Last update: 2026-08-11 04:01

version in VCS is newer than in repository, is it time to upload? normal

vcswatch reports that this package seems to have a new changelog entry (version 1.70.0+ds-1.1, distribution UNRELEASED) and new commits in its VCS. You should consider whether it's time to make an upload.

Here are the relevant commit messages:

commit 66b38e5677112d79b40f980d8902ffed0e05b230
Author: Steffen Moeller <moeller@debian.org>
Date:   Mon Aug 10 18:25:52 2026 +0200

    Added configure to Files-Excluded

https://salsa.debian.org/api/v4/projects/r-pkg-team%2Fr-bioc-shortread API request failed: 401 Unauthorized at /srv/qa.debian.org/data/vcswatch/vcswatch line 410.

Created: 2026-08-10 Last update: 2026-08-10 21:30

testing migrations

This package is part of the ongoing testing transition known as r-api-bioc-3.23. Please avoid uploads unrelated to this transition, they would likely delay it and require supplementary work from the release managers. On the other hand, if your package has problems preventing it to migrate to testing, please fix them as soon as possible. You can probably find supplementary information in the debian-release archives or in the corresponding release.debian.org bug.
excuses:
- Migrates after: r-bioc-biobase, r-bioc-biocgenerics, r-bioc-biocparallel, r-bioc-biostrings, r-bioc-genomeinfodb, r-bioc-genomicalignments, r-bioc-genomicranges, r-bioc-iranges, r-bioc-pwalign, r-bioc-rhtslib, r-bioc-rsamtools, r-bioc-s4vectors, r-bioc-seqinfo, r-bioc-xvector
- Migration status for r-bioc-shortread (- to 1.70.0+ds-1): BLOCKED: Rejected/violates migration policy/introduces a regression
- Issues preventing migration:
- ∙ ∙ Autopkgtest for r-bioc-shortread/1.70.0+ds-1: amd64: Failed ♻, arm64: Pass, ppc64el: Pass
- ∙ ∙ Piuparts check waiting for test results - https://piuparts.debian.org/sid/source/r/r-bioc-shortread.html
- ∙ ∙ Lintian check waiting for test results on amd64, riscv64 - info
- ∙ ∙ Reproducibility check waiting for results on amd64 - info
- ∙ ∙ Too young, only 2 of 5 days old
- ∙ ∙ Build-Depends(-Arch): r-bioc-shortread r-bioc-biobase
- ∙ ∙ Build-Depends(-Arch): r-bioc-shortread r-bioc-biocgenerics (not considered)
- ∙ ∙ Build-Depends(-Arch): r-bioc-shortread r-bioc-biocparallel (not considered)
- ∙ ∙ Build-Depends(-Arch): r-bioc-shortread r-bioc-biostrings (not considered)
- ∙ ∙ Build-Depends(-Arch): r-bioc-shortread r-bioc-genomeinfodb (not considered)
- ∙ ∙ Build-Depends(-Arch): r-bioc-shortread r-bioc-genomicalignments
- ∙ ∙ Build-Depends(-Arch): r-bioc-shortread r-bioc-genomicranges (not considered)
- ∙ ∙ Build-Depends(-Arch): r-bioc-shortread r-bioc-iranges (not considered)
- ∙ ∙ Build-Depends(-Arch): r-bioc-shortread r-bioc-pwalign
- ∙ ∙ Build-Depends(-Arch): r-bioc-shortread r-bioc-rhtslib
- ∙ ∙ Build-Depends(-Arch): r-bioc-shortread r-bioc-rsamtools (not considered)
- ∙ ∙ Build-Depends(-Arch): r-bioc-shortread r-bioc-s4vectors
- ∙ ∙ Build-Depends(-Arch): r-bioc-shortread r-bioc-seqinfo (not considered)
- ∙ ∙ Build-Depends(-Arch): r-bioc-shortread r-bioc-xvector (not considered)
- ∙ ∙ Depends: r-bioc-shortread r-bioc-biobase
- ∙ ∙ Depends: r-bioc-shortread r-bioc-biocgenerics (not considered)
- ∙ ∙ Depends: r-bioc-shortread r-bioc-biocparallel (not considered)
- ∙ ∙ Depends: r-bioc-shortread r-bioc-biostrings (not considered)
- ∙ ∙ Depends: r-bioc-shortread r-bioc-genomicalignments
- ∙ ∙ Depends: r-bioc-shortread r-bioc-genomicranges (not considered)
- ∙ ∙ Depends: r-bioc-shortread r-bioc-iranges (not considered)
- ∙ ∙ Depends: r-bioc-shortread r-bioc-pwalign
- ∙ ∙ Depends: r-bioc-shortread r-bioc-rhtslib
- ∙ ∙ Depends: r-bioc-shortread r-bioc-rsamtools (not considered)
- ∙ ∙ Depends: r-bioc-shortread r-bioc-s4vectors
- ∙ ∙ Depends: r-bioc-shortread r-bioc-seqinfo (not considered)
- ∙ ∙ Depends: r-bioc-shortread r-bioc-xvector (not considered)
- Additional info (not blocking):
- ∙ ∙ Reproduced on arm64 - info
- ∙ ∙ Reproduced on armhf - info
- ∙ ∙ Reproduced on i386 - info
- Not considered

news

[rss feed]

[2026-08-10] Accepted r-bioc-shortread 1.70.0+ds-1 (source amd64) into unstable (Steffen Moeller)
[2026-03-15] Accepted r-bioc-shortread 1.64.0-4 (source) into unstable (Charles Plessy)
[2025-11-24] r-bioc-shortread REMOVED from testing (Debian testing watch)
[2025-02-01] r-bioc-shortread 1.64.0-3 MIGRATED to testing (Debian testing watch)
[2025-01-27] Accepted r-bioc-shortread 1.64.0-3 (source) into unstable (Michael R. Crusoe)
[2025-01-21] r-bioc-shortread REMOVED from testing (Debian testing watch)
[2025-01-13] Accepted r-bioc-shortread 1.64.0-2 (source) into unstable (Michael R. Crusoe)
[2024-11-29] Accepted r-bioc-shortread 1.64.0-1 (source) into experimental (Michael R. Crusoe)
[2024-09-10] r-bioc-shortread 1.62.0-1 MIGRATED to testing (Debian testing watch)
[2024-08-18] Accepted r-bioc-shortread 1.62.0-1 (source) into unstable (Michael R. Crusoe)
[2024-07-23] Accepted r-bioc-shortread 1.62.0-1~0exp1 (source) into experimental (Michael R. Crusoe)
[2024-07-14] Accepted r-bioc-shortread 1.62.0-1~0exp (source) into experimental (Michael R. Crusoe)
[2024-06-25] r-bioc-shortread REMOVED from testing (Debian testing watch)
[2024-04-26] r-bioc-shortread 1.60.0-2 MIGRATED to testing (Debian testing watch)
[2024-04-05] r-bioc-shortread REMOVED from testing (Debian testing watch)
[2023-12-21] r-bioc-shortread 1.60.0-2 MIGRATED to testing (Debian testing watch)
[2023-12-18] Accepted r-bioc-shortread 1.60.0-2 (source) into unstable (Andreas Tille)
[2023-12-01] Accepted r-bioc-shortread 1.60.0-1 (source) into unstable (Andreas Tille)
[2023-07-27] Accepted r-bioc-shortread 1.58.0-1 (source) into unstable (Andreas Tille)
[2023-07-14] r-bioc-shortread REMOVED from testing (Debian testing watch)
[2022-12-05] r-bioc-shortread 1.56.1-1 MIGRATED to testing (Debian testing watch)
[2022-11-21] Accepted r-bioc-shortread 1.56.1-1 (source) into unstable (Andreas Tille)
[2022-05-24] r-bioc-shortread 1.54.0-1 MIGRATED to testing (Debian testing watch)
[2022-05-16] Accepted r-bioc-shortread 1.54.0-1 (source) into unstable (Andreas Tille)
[2021-12-03] r-bioc-shortread 1.52.0-1 MIGRATED to testing (Debian testing watch)
[2021-11-25] Accepted r-bioc-shortread 1.52.0-1 (source) into unstable (Andreas Tille)
[2021-09-29] r-bioc-shortread 1.50.0-1 MIGRATED to testing (Debian testing watch)
[2021-09-07] Accepted r-bioc-shortread 1.50.0-1 (source) into unstable (Andreas Tille)
[2021-02-09] r-bioc-shortread 1.48.0-2 MIGRATED to testing (Debian testing watch)
[2021-02-09] r-bioc-shortread 1.48.0-2 MIGRATED to testing (Debian testing watch)

bugs [bug history graph]

all: 0

links

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lintian (0, 1)
buildd: logs, cross
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other distros
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ubuntu

[Information about Ubuntu for Debian Developers]

version: 1.64.0-4