Debian Med

Packages with test failures (209) [hide table]
Package VCS Archive Bugs Tests Upstream
aevol
9.4.0-2 (Git) action needed
9.4.0-2 0 pass | fail | pass 9.4.0
bart-cuda
(Git) action needed
0.8.00-2 2 (2 RC) fail | pass | fail 1.0.00
bcbio 1.2.9-2 0 fail | neutral | fail 1.2.9
bio-tradis 1.4.5+dfsg2-2 0 pass | fail 1.4.5
bioperl
1.7.8-4 (Git) action needed
1.7.8-4 0 pass | fail | fail 1.7.8
bioperl-run 1.7.3-14 0 pass | fail | fail 1-7-3
bmtk 1.1.1+ds-5 0 pass | fail | pass 1.2.0
busco 6.0.0-1 0 pass | pass | fail 6.1.0
camitk 6.0.0-3 0 pass | fail | pass 6.0.0
canu
2.3+dfsg-1 (Git) action needed
2.2+dfsg-5 0 fail 2.3
circlator 1.5.6-14 0 fail | pass | pass 1.5.5-docker5
cluster3 1.59+ds-5 0 fail | pass | fail 1.59
conda-package-handling 2.4.0-1 0 pass | fail | pass 2.5.0
conda-package-streaming 0.12.0-2 0 pass | fail | pass 0.13.0
dcmstack 0.9+git20260610.ed4d27c-2 0 pass | pass | fail 0.9
dicomnifti 2.33.1-5 0 fail | pass | pass 2.33.1
drmaa 0.7.9-3 0 fail | neutral | neutral 0.7.9
emboss-explorer
2.2.0-13 (Git) action needed
2.2.0-12 0 fail 2.2.0
emperor 1.0.5+ds-1 2 (1 RC) pass | pass | fail 1.0.5
epigrass 3.0.0+dfsg-1 0 fail
examl 3.0.22-7 0 pass | fail | pass 3.0.22
freebayes
1.3.9-2 (Git) action needed
1.3.9-2 1 pass | pass | fail 1.3.10
gemma 0.98.5+dfsg-3 1 (1 RC) pass | fail | pass 0.98.5
genomicsdb 1.5.5-2 1 fail | pass | pass 1.5.5
gffread 0.12.7-8 0 pass | fail | fail 0.12.9
ggd-utils 1.0.0+ds-3 0 fail | pass | pass 1.0.0
hilive 2.0a-6 0 fail | pass | pass 2.0a
hts-nim-tools 0.2.1-4 0 fail | pass | pass 0.2.1
idseq-bench 0.0~git20210602.27fb6dc-2 0 fail | pass | pass
imbalanced-learn 0.14.1-1 0 pass | fail | pass 0.14.2
intake 0.6.6-1 0 fail | pass | fail 2.0.8
invesalius 3.1.99998-8 1 (1 RC) neutral | neutral | fail 3.1.99998
kallisto 0.51.1+dfsg-2 1 (1 RC) pass | fail | pass 0.52.0
khmer
3.0.0~a3+dfsg-8 (Git) action needed
3.0.0~a3+dfsg-9~0exp 0 fail | fail | pass 3.0.0~a3
kineticstools 0.6.1+git20220223.1326a4d+dfsg-7 0 pass | fail | pass 0.6.1+git20220223.1326a4d
lambda-align 1.0.3-9 0 pass | fail | pass 1.0.3
lefse 1.1.2-2 0 pass | fail | fail 1.1.2
libatomic-queue 1.7.2-1 0 fail | pass | pass 1.9.2
libchado-perl 1.31-9 1 fail 1.31
libsis-jhdf5-java 19.04.1+dfsg-3 0 fail | fail | fail
logol 1.7.9+dfsg-6 0 fail | pass | pass 1.7.9
mapsembler2 2.2.4+dfsg1-7 0 pass | fail | fail 2.2.4
mindthegap
2.3.0-4 (Git) action needed
2.3.0-5 0 fail | pass | pass 2.3.0
mosdepth 0.3.11+ds-3 0 fail | pass | pass 0.3.14
nanook 1.33+dfsg-6 0 fail | pass | fail 1.33
nanostat 1.4.0-4 1 fail | pass | pass 1.4.0
nim-hts 0.3.25+ds-3 1 fail | pass | pass 0.3.31
nim-kexpr 0.0.2-4 0 fail | pass | pass 0.0.2
nim-lapper 0.1.8-1 0 fail | pass | pass 0.1.8
nipype 1.10.0-2 0 pass | pass | fail 1.11.0
pbsuite 15.8.24+dfsg-8 1 (1 RC) fail | fail | fail 15.8.24
pizzly 0.37.3+ds-12 0 pass | fail | fail 0.37.3
pplacer
1.1~alpha19-9 (Git) action needed
1.1~alpha19-8 2 (2 RC) fail 1.1.alpha22
psychopy
2026.1.0+dfsg-1 (Git) action needed
2023.2.4+dfsg-4 7 (2 RC) pass | pass | fail 2026.2.0
pychopper 2.7.10-3 0 fail | pass | neutral 2.7.10
pysurfer
0.11.2-2 (Git) action needed
0.11.2-2 0 fail | pass | pass 0.11.2
python-alignlib 0.1.1+dfsg-2 0 neutral | fail | neutral 0.1.1
python-anndata 0.12.16-1 0 fail | pass | pass 0.12.18
python-bids-validator
1.14.6-1 (Git) action needed
1.14.6-1 0 pass | fail | pass 1.14.6
python-cobra 0.31.1-1 0 fail | pass | pass 0.31.1
python-cogent 2026.6.2a0+dfsg-2 0 fail | pass | pass 2026.6.9a0
python-duckpy 3.2.0-3 0 fail | pass | fail 3.2.0
python-easydev 0.13.3+dfsg1-2 0 pass | fail | pass 0.14.0
python-etelemetry 0.3.1-2 0 fail | pass | pass 0.3.1
python-pbcommand 2.1.1+git20231020.28d1635-2 0 pass | fail | pass 2.1.1+git20231020.28d1635
python-pbcore 2.1.2+dfsg-14 1 (1 RC) pass | pass | fail 2.6.0
python-pyflow 1.1.20-4 0 fail | neutral | fail 1.1.20
python-pynndescent 0.6.0-1 1 (1 RC) fail | fail | pass 0.6.0
python-rdflib-jsonld 0.6.1-2 0 fail | neutral | neutral 0.6.2
python-skbio 0.6.3-2 1 (1 RC) pass | pass | fail 0.7.3
python-sqlsoup 0.9.1-5 0 neutral | neutral | fail 0.9.1
python3-typed-ast 1.5.4-1 0 fail | neutral | neutral 1.5.5
q2-alignment
2024.5.0-1 (Git) action needed
2024.5.0-1 1 (1 RC) fail | fail | fail 2026.4.0
q2-cutadapt
2024.5.0-2 (Git) action needed
2024.5.0-1 1 fail | fail | fail 2026.4.0
q2-dada2 2024.5.0-1 0 fail | fail | fail 2026.4.0
q2-demux
2024.5.0+dfsg-1 (Git) action needed
2024.5.0+dfsg-1 1 (1 RC) fail | fail | fail 2026.4.0
q2-diversity-lib
2024.5.0-1 (Git) action needed
2024.5.0-1 0 fail | fail | fail 2026.4.0
q2-emperor
2024.5.0-2 (Git) action needed
2024.5.0-2 0 fail | pass | pass 2026.4.0
q2-feature-classifier 2024.5.0-1 0 fail | pass | fail 2026.4.0
q2-feature-table
2024.5.0+dfsg-1 (Git) action needed
2024.5.0+dfsg-1 0 fail | fail | fail 2026.4.0
q2-fragment-insertion
2024.5.0-1 (Git) action needed
2024.5.0-1 0 fail | fail | fail 2026.4.0
q2-metadata 2024.5.0+dfsg-1 0 fail | pass | pass 2026.4.0
q2-phylogeny
2024.5.0-1 (Git) action needed
2024.5.0-1 2 (1 RC) fail | fail | fail 2026.4.0
q2-quality-control 2024.5.0-2 0 fail | fail | fail 2026.4.0
q2-quality-filter 2024.5.0-1 0 fail | fail | fail 2026.4.0
q2-sample-classifier
2024.5.0-2 (Git) action needed
2024.5.0-2 0 fail | fail | fail 2026.4.0
q2-taxa 2024.5.0+dfsg-1 0 fail | pass | pass 2026.4.0
q2-types
2024.5.0-1 (Git) action needed
2024.5.0-1 3 (1 RC) fail | fail | fail 2026.4.0
q2cli
2025.10.1-1 (Git) action needed
2024.5.0-2 1 (1 RC) fail | fail | neutral 2026.4.0
qiime
2025.10.1-1 (Git) action needed
2024.5.0-1 2 fail | fail | fail 2026.4.0
r-bioc-altcdfenvs 1:2.68.0-3 0 pass | fail | pass 2.74.0
r-bioc-annotate 1.84.0+dfsg-3 0 pass | fail | pass 1.90.0
r-bioc-annotationdbi 1.68.0-3 0 pass | fail | pass 1.74.0
r-bioc-annotationfilter 1.30.0+dfsg-3 0 pass | fail | pass 1.36.0
r-bioc-annotationhub 3.14.0+dfsg-3 0 pass | fail | pass 4.2.1
r-bioc-biocparallel 1.40.0-3 0 pass | fail | pass 1.46.0
r-bioc-biomart 2.62.1+dfsg-2 0 pass | fail | fail 2.68.0
r-bioc-biomformat 1.34.0+dfsg-3 0 pass | pass | fail 1.40.0
r-bioc-biostrings 2.74.1+dfsg-3 1 (1 RC) pass | fail | pass 2.80.1
r-bioc-biovizbase 1.54.0-3 0 pass | fail | pass 1.60.0
r-bioc-bsgenome 1.74.0-3 0 pass | fail | pass 1.80.0
r-bioc-cummerbund 2.48.0-3 0 pass | fail | pass
r-bioc-delayedarray 0.32.0+dfsg-3 1 (1 RC) pass | fail | pass 0.38.2
r-bioc-deseq2 1.46.0+dfsg-3 0 pass | fail | pass 1.52.0
r-bioc-edger 4.4.2+dfsg-2 0 pass | fail | pass 4.10.1
r-bioc-ensembldb 2.30.0+dfsg-4 0 pass | fail | pass 2.36.1
r-bioc-genefilter 1.88.0-3 0 pass | fail | pass 1.94.0
r-bioc-geneplotter 1.84.0+dfsg-3 0 pass | fail | pass 1.90.0
r-bioc-genomeinfodb 1.42.3+dfsg-1 1 (1 RC) fail | fail | fail 1.48.0
r-bioc-genomicalignments 1.42.0-3 0 pass | fail | pass 1.48.0
r-bioc-genomicfeatures 1.58.0+dfsg-3 0 pass | fail | pass 1.64.0
r-bioc-genomicranges 1.58.0+dfsg-3 0 pass | fail | pass 1.64.0
r-bioc-go.db 3.20.0-3 0 pass | fail | pass 3.23.1
r-bioc-gviz 1.50.0+dfsg-3 0 pass | fail | pass 1.56.0
r-bioc-iranges 2.40.1-4 0 pass | fail | pass 2.46.0
r-bioc-limma 3.62.2+dfsg-2 0 pass | fail | pass 3.68.4
r-bioc-phyloseq 1.54.0+dfsg-1 0 pass | fail | neutral 1.56.0
r-bioc-rsamtools 2.22.0+dfsg-3 1 (1 RC) pass | fail | pass 2.28.0
r-bioc-rtracklayer 1.66.0-3 0 pass | fail | pass 1.72.0
r-bioc-shortread 1.64.0-4 1 (1 RC) pass | fail | pass 1.70.0
r-bioc-summarizedexperiment 1.36.0+dfsg-3 0 pass | fail | pass 1.42.0
r-bioc-variantannotation 1.52.0-3 0 pass | fail | pass 1.58.0
r-bioc-xvector 0.46.0-3 0 pass | fail | pass 0.52.0
r-cran-adegenet 2.1.11-2 0 pass | fail | pass 2.1.11
r-cran-ape 5.8-1-2 0 pass | fail | pass 5.8-1
r-cran-assertthat 0.2.1-4 0 pass | fail | pass 0.2.1
r-cran-bbmle 1.0.25.1-2 1 pass | fail | pass 1.0.25.1
r-cran-bio3d 2.4-5-2 0 pass | fail | pass 2.4-5
r-cran-bit64 4.8.2-1 0 pass | fail | pass
r-cran-blob 1.3.0-1 0 pass | fail | pass 1.3.0
r-cran-bold 1.3.0-1 0 fail | fail | fail
r-cran-checkmate
2.3.4-1 (Git) action needed
2.3.4-1 0 pass | fail | pass 2.3.4
r-cran-curl 7.1.0+dfsg-2 1 pass | fail | pass 7.1.0
r-cran-data.table 1.18.4+dfsg-1 0 pass | fail | pass 1.18.4
r-cran-dbitest 1.8.2-2 0 pass | fail | pass 1.8.2
r-cran-dorng 1.8.6.3-1 0 pass | fail | pass 1.8.6.3
r-cran-dplyr
1.2.1-2 (Git) action needed
1.2.1-2 1 pass | fail | pass 1.2.1
r-cran-etm 1.1.2-1 0 pass | fail | pass 1.1.2
r-cran-evaluate 1.0.5-2 0 pass | fail | pass
r-cran-fauxpas 0.6.0+dfsg-1 0 pass | fail | pass 0.6.0
r-cran-filehash 2.4-6-3 0 fail | pass | pass 2.4-6
r-cran-fitcoach 1.0-5 0 fail | pass | pass 1.0
r-cran-future 1.70.0+dfsg-1 0 pass | fail | pass
r-cran-genabel 1.8-0-6 0 fail | pass | pass 1.8-0
r-cran-genabel.data 1.0.0-4 0 fail | pass | pass
r-cran-ggplot2 4.0.3+dfsg-1 0 pass | fail | pass 4.0.3
r-cran-glue 1.8.1-2 0 pass | fail | pass 1.8.1
r-cran-gtable 0.3.6+dfsg-2 0 pass | fail | pass 0.3.6
r-cran-hexbin 1.28.5-2 0 pass | fail | pass 1.28.5
r-cran-hms 1.1.4-1 0 pass | fail | pass 1.1.4
r-cran-htmltools 0.5.9-2 0 pass | fail | pass 0.5.9
r-cran-htmlwidgets 1.6.4+dfsg-2 0 pass | fail | pass 1.6.4
r-cran-httr 1.4.8+dfsg-1 0 pass | fail | pass 1.4.8
r-cran-igraph 2.3.2-1 1 pass | fail | pass 2.3.2
r-cran-lazyeval 0.2.3-1 0 pass | fail | pass 0.2.3
r-cran-luminescence 1.2.0-1 0 pass | fail | pass
r-cran-magrittr 2.0.5-1 0 pass | fail | pass 2.0.5
r-cran-memoise 2.0.1-2 0 pass | fail | pass 2.0.1
r-cran-mockery 0.4.5+dfsg-1 0 pass | fail | pass 0.4.5
r-cran-mockr 0.2.2-1 0 fail | fail | pass 0.2.2
r-cran-openssl 2.4.2+dfsg-1 1 pass | fail | pass 2.4.2
r-cran-optparse 1.8.2-1 0 pass | fail | pass 1.8.2
r-cran-permute 0.9-10-1 0 pass | fail | pass 0.9-10
r-cran-phangorn 2.12.1+dfsg-2 0 fail | fail | fail 2.12.1
r-cran-plyr 1.8.9-2 0 pass | fail | pass 1.8.9
r-cran-prettyunits 1.2.0-2 0 pass | fail | pass 1.2.0
r-cran-purrr 1.2.2-1 0 pass | fail | pass 1.2.2
r-cran-raster 3.6-32-1 0 fail | pass | pass 3.6-32
r-cran-rentrez 1.2.4+dfsg-1 0 pass | fail | pass 1.2.4
r-cran-rglwidget 0.2.1-4 0 pass | fail | pass
r-cran-ritis 1.0.0-2 0 pass | pass | fail 1.0.0
r-cran-rlang 1.2.0-5 0 pass | fail | pass 1.2.0
r-cran-rmarkdown 2.30+dfsg-1 1 pass | fail | pass 2.31
r-cran-rncl 0.8.9-1 0 pass | fail | pass 0.8.9
r-cran-rnexml 2.4.11+ds-2 0 pass | fail | pass 2.4.11
r-cran-rniftilib 0.0-35.r79-6 0 fail | pass | pass 0.No-Site
r-cran-rocr 1.0-12-1 0 pass | fail | pass 1.0-12
r-cran-rotl 3.1.1-1 0 pass | fail | pass 3.1.1
r-cran-rprojroot 2.1.1-3 0 pass | fail | pass 2.1.1
r-cran-rredlist 1.1.1-1 0 pass | fail | pass 1.1.1
r-cran-rsqlite 2.4.6-1 0 pass | fail | pass 3.53.2
r-cran-scales 1.4.0-1 0 pass | fail | pass 1.4.0
r-cran-shiny 1.13.0+dfsg-1 2 pass | fail | pass 1.14.0
r-cran-stringr 1.6.0-1 0 pass | fail | pass 1.6.0
r-cran-surveillance 1.25.0-1 0 pass | fail | pass 1.25.0
r-cran-testthat 3.3.2-2 0 pass | fail | pass
r-cran-tibble 3.3.1+dfsg-2 0 pass | fail | pass 3.3.1
r-cran-tidyr
1.3.2-3 (Git) action needed
1.3.2-3 0 pass | fail | pass 1.3.2
r-cran-tidyselect 1.2.1+dfsg-3 0 pass | fail | pass 1.2.1
r-cran-tikzdevice 0.12.6-3 0 fail | fail | pass 0.12.6
r-cran-treescape 1.10.18+dfsg-2 0 fail | pass | fail 1.10.18
r-cran-vioplot 0.5.1-2 0 pass | fail | pass 0.5.1
r-cran-webutils 1.2.2-2 0 pass | fail | pass 1.2.2
r-cran-wikipedir 1.7.1-2 0 pass | fail | pass 1.7.1
r-cran-withr 3.0.2+dfsg-2 0 pass | fail | pass 3.0.3
r-cran-worrms
0.4.3+dfsg-2 (Git) action needed
0.4.3+dfsg-2 0 pass | pass | fail 0.4.3
r-cran-xml2 1.5.2-2 0 pass | fail | pass 1.6.0
readucks 0.0.3-8 0 fail | pass | pass 0.0.3
relion-cuda
(Git) action needed
3.1.3-2 2 (2 RC) fail | neutral | fail 5.1.0
seqkit 2.10.1+ds-1 0 pass | fail | pass 2.13.0
seqtools 4.44.1+dfsg-8 1 (1 RC) pass | fail | pass
snakemake
8.2.3-1 (Git) action needed
7.32.4-11 2 pass | fail | pass 9.23.1
sourmash 4.9.4-8 0 pass | fail | pass 4.9.4
squizz 0.99d+dfsg-3 0 fail | fail | pass 0.99d
trinityrnaseq 2.15.2+dfsg-3 1 pass | fail | fail 2.15.2
umap-learn 0.5.9.post2+dfsg-1 4 (1 RC) fail | pass | fail 0.5.12
umis
1.0.9-2 (Git) action needed
1.0.9-2 2 (1 RC) fail | pass | pass 1.0.9
vg 1.59.0+ds-0.1 5 (2 RC) pass | pass | fail 1.75.0
xpore 2.1-2 0 pass | fail | pass 2.1