|
abyss
|
|
2.3.10-2
|
1
|
pass | pass | pass
|
2.3.10
|
|
acedb
|
|
4.9.39+dfsg.02-9
|
2 (1 RC)
|
|
|
|
altree
|
|
1.3.2-4
|
1
|
pass | pass | pass
|
1.3.2
|
|
amide
|
|
1.0.6-8.2
|
1
|
neutral | neutral | neutral
|
1.0.6
|
|
ants
|
|
2.6.4+dfsg-1
|
7
|
|
2.6.5
|
|
arb
|
|
6.0.6-8
|
7 (3 RC)
|
|
7.0
|
|
augur
|
|
24.4.0-3
|
1
|
pass | pass | pass
|
33.4.1
|
|
bart-cuda
|
|
0.8.00-2
|
2 (2 RC)
|
fail | pass | fail
|
1.0.00
|
|
bart-view
|
|
0.3.00-1
|
1 (1 RC)
|
|
0.3.00
|
|
bbhash
|
|
1.0.0-7
|
1
|
pass | pass | pass
|
1.0.0
|
|
beagle
|
|
250227-2
|
1
|
pass | pass | pass
|
250227
|
|
beast-mcmc
|
|
1.10.4+dfsg-8
|
1
|
|
10.6.0-beta2
|
|
beast2-mcmc
|
|
2.7.6+dfsg-1
|
1
|
pass | pass | pass
|
2.7.8
|
|
biomaj3-core
|
|
3.0.28-4
|
1
|
pass | pass | pass
|
3.0.28
|
|
biosig
|
|
3.9.5-1
|
1
|
neutral | neutral | neutral
|
3.9.5
|
|
blimps
|
|
3.9+ds-4
|
1 (1 RC)
|
|
|
|
brian
|
|
2.10.1-1
|
3 (1 RC)
|
pass | pass | pass
|
2.10.1
|
|
btllib
|
|
1.7.5+dfsg-2
|
1
|
pass | pass | pass
|
1.7.8
|
|
camp
|
|
0.8.4-6
|
1
|
|
0.8.4
|
|
cassiopee
|
|
1.0.9-5
|
1
|
pass | pass | pass
|
1.0.9
|
|
chromhmm
|
|
1.27+dfsg-1
|
1
|
pass | pass | pass
|
1.28
|
|
cif-tools
|
|
2.0.0-1
|
1
|
pass | pass | pass
|
2.0.1
|
|
connectome-workbench
|
|
2.1.0+dfsg-2
|
1
|
|
2.1.0
|
|
consensuscore
|
|
1.1.1+dfsg-9
|
1
|
neutral | neutral | neutral
|
0.No-Release
|
|
ctn
|
|
3.2.0~dfsg-10
|
2
|
|
3.2.0
|
|
cufflinks
|
|
2.2.1+dfsg.1-10
|
3 (1 RC)
|
|
2.2.1
|
|
cutesv
|
|
2.1.1-1
|
1
|
neutral | neutral | neutral
|
2.1.3
|
|
cwltool
|
|
3.2.20260413085819-1
|
1
|
pass | pass | pass
|
3.2.20260413085819
|
|
cycle
|
|
0.3.3-2
|
5
|
|
0.3.3
|
|
datatables.js
|
|
1.11.5+dfsg-2
|
1
|
|
2.3.8
|
|
dawg
|
|
1.2-5
|
1
|
neutral | neutral | neutral
|
1.2
|
|
dcmtk
|
|
3.7.0+really3.7.0-6
|
5
|
pass | pass | pass
|
3.7.0
|
|
debian-med
|
|
3.9.0
|
1
|
|
|
|
deblur
|
|
1.1.1-4
|
1
|
neutral | neutral | neutral
|
1.1.1
|
|
dicom3tools
|
|
1.00~20240118131615-2
|
6
|
pass | pass | pass
|
1.00.snapshot.20260320044638
|
|
ea-utils
|
|
1.1.2+dfsg-10
|
1
|
pass | pass | pass
|
0.No-Track
|
|
embassy-domainatrix
|
|
0.1.660-5
|
1
|
|
|
|
embassy-domalign
|
|
0.1.660-5
|
1
|
|
|
|
embassy-domsearch
|
|
1:0.1.660-4
|
1
|
|
|
|
emboss
|
|
6.6.0+dfsg-18
|
6 (1 RC)
|
pass | pass | pass
|
|
|
emperor
|
|
1.0.5+ds-1
|
2 (1 RC)
|
pass | pass | fail
|
1.0.5
|
|
f2j
|
|
0.8.1+dfsg-6
|
1
|
|
0.8.1
|
|
freebayes
|
|
1.3.9-2
|
1
|
pass | pass | fail
|
1.3.10
|
|
freecontact
|
|
1.0.21-16
|
1
|
pass | pass | pass
|
|
|
garli
|
|
2.1-9
|
1
|
pass | pass | pass
|
2.1
|
|
gatb-core
|
|
1.4.2+dfsg-13
|
2
|
pass | pass | pass
|
1.4.2
|
|
gdcm
|
|
3.0.24-10
|
8
|
pass | pass | pass
|
3.2.8
|
|
gemma
|
|
0.98.5+dfsg-3
|
1 (1 RC)
|
pass | fail | pass
|
0.98.5
|
|
genomicsdb
|
|
1.5.5-2
|
1
|
fail | pass | pass
|
1.5.5
|
|
gentle
|
|
1.9.5~alpha2+dfsg1-3
|
2
|
|
1.9.5.alpha2
|
|
getdata
|
|
0.2-4
|
2
|
|
0.No-Track
|
|
gnumed-client
|
|
1.8.24+dfsg-3
|
1
|
neutral | neutral | neutral
|
1.8.24
|
|
gwyddion
|
|
3.10-6
|
2
|
|
3.10
|
|
heudiconv
|
|
1.4.0-2
|
1 (1 RC)
|
neutral | pass | neutral
|
1.4.0
|
|
hinge
|
|
0.5.0-8
|
4
|
neutral
|
0.5.0
|
|
hisat2
|
|
2.2.1-5
|
1
|
pass | pass | pass
|
2.2.2
|
|
hmmer
|
|
3.4+dfsg-3
|
1
|
pass | pass | pass
|
3.4
|
|
hmmer2
|
|
2.3.2+dfsg-12
|
1
|
pass | pass | pass
|
2.3.2
|
|
htslib
|
|
1.22.1+ds2-1
|
1
|
pass | pass | pass
|
1.23.1
|
|
insighttoolkit5
|
|
5.4.6-1
|
2
|
|
5.4.6
|
|
invesalius
|
|
3.1.99998-8
|
1 (1 RC)
|
neutral | neutral | fail
|
3.1.99998
|
|
ismrmrd
|
|
1.15.0-3
|
1
|
pass | pass | pass
|
1.15.0
|
|
ivar
|
|
1.4.4+dfsg-2
|
1
|
pass | pass | pass
|
1.4.4
|
|
jellyfish
|
|
2.3.1-6
|
2
|
pass | pass | pass
|
2.3.1
|
|
jellyfish1
|
|
1.1.11-10
|
2
|
pass | pass | pass
|
1.1.11
|
|
jmodeltest
|
|
2.1.10+dfsg-14
|
1
|
|
2.1.10
|
|
kallisto
|
|
0.51.1+dfsg-2
|
1 (1 RC)
|
pass | fail | pass
|
0.52.0
|
|
kmer
|
|
0~20150903+r2013-10
|
2
|
pass | pass | pass
|
0.No-Release
|
|
kmerresistance
|
|
2.2.0-4
|
1
|
|
2.2.0
|
|
lastz
|
|
1.04.52-1
|
1
|
pass | pass | pass
|
1.04.52
|
|
libai-fann-perl
|
|
0.10-5
|
1
|
pass | pass | pass
|
0.10
|
|
libbio-db-refseq-perl
|
|
1.7.4-2
|
1 (1 RC)
|
pass | pass | pass
|
1.7.4
|
|
libbio-db-seqfeature-perl
|
|
1.7.5-1
|
1
|
pass | pass | pass
|
1.7.5
|
|
libchado-perl
|
|
1.31-9
|
1
|
fail
|
1.31
|
|
libdeflate
|
|
1.25-1
|
1
|
pass | pass | pass
|
1.25
|
|
libgoby-java
|
|
3.3.1+dfsg2-12
|
1
|
pass | pass | pass
|
3.3.1
|
|
libgzstream
|
|
1.5+git20171107.9a20658-3
|
1
|
|
1.5+git20171107.9a20658
|
|
liblemon
|
|
1.3.1+dfsg-7
|
1
|
|
|
|
libmaus2
|
|
2.0.813+ds-5
|
4
|
|
|
|
libminc
|
|
2.5.0-2
|
1
|
|
release.2.5.0
|
|
librcsb-core-wrapper
|
|
1.005-13
|
2
|
neutral | neutral | neutral
|
1.005
|
|
libsbml
|
|
5.20.5+dfsg-3
|
1
|
neutral | neutral | neutral
|
5.21.1
|
|
libssw
|
|
1.1-16
|
1
|
pass | pass | pass
|
1.2.5
|
|
libtecla
|
|
1.6.3-5
|
1
|
|
1.6.3
|
|
libtfbs-perl
|
|
0.7.1+ds-5
|
1
|
pass | pass | pass
|
0.7.1
|
|
libvbz-hdf-plugin
|
|
1.0.2-3.1
|
2
|
|
|
|
libzeep
|
|
7.3.2-3
|
1
|
pass | pass | pass
|
7.3.2
|
|
libzstd
|
|
1.5.7+dfsg-3
|
10
|
pass | pass | pass
|
1.5.7
|
|
ltrsift
|
|
1.0.2-11
|
3 (1 RC)
|
|
1.0.2
|
|
maude
|
|
3.5.1-1
|
1
|
|
3.5.1
|
|
mcl
|
|
1:22-282+ds-4
|
1
|
pass | pass | pass
|
22-282
|
|
mencal
|
|
3.0-6
|
1
|
pass | pass | pass
|
3.0
|
|
metaeuk
|
|
7-bba0d80+ds-2
|
1
|
pass | pass | pass
|
7-bba0d80
|
|
metaphlan2-data
|
|
2.6.0+ds-4
|
2
|
|
0.No-Track
|
|
metastudent
|
|
2.0.1-10
|
1
|
pass | pass | pass
|
0.No-Site
|
|
mia
|
|
2.4.7-18
|
1
|
pass | pass
|
2.4.7
|
|
microbegps
|
|
1.0.0-7
|
1
|
neutral | neutral | neutral
|
1.0.0
|
|
microbiomeutil
|
|
20101212+dfsg1-6
|
1
|
pass | pass | pass
|
20101212
|
|
milib
|
|
2.2.0+dfsg-1
|
1 (1 RC)
|
|
|
|
mlv-smile
|
|
1.47-10
|
1
|
pass | pass | pass
|
1.47
|
|
mmseqs2
|
|
18-8cc5c+ds-1
|
1
|
pass | pass | pass
|
18-8cc5c
|
|
mrtrix3
|
|
3.0.8-2
|
2 (1 RC)
|
|
3.0.8
|
|
multiqc
|
|
1.21+dfsg-4
|
1
|
pass | pass | pass
|
1.35
|
|
murasaki
|
|
1.68.6-17
|
1
|
pass | pass | pass
|
1.68.6
|
|
muscle
|
|
1:5.1.0-1
|
1
|
pass | pass | pass
|
5.3
|
|
nanostat
|
|
1.4.0-4
|
1
|
fail | pass | pass
|
1.4.0
|
|
ncbi-blast+
|
|
2.17.0+ds-7
|
5
|
pass | pass | pass
|
2.17.0
|
|
ncbi-igblast
|
|
1.20.0-4
|
2
|
pass | pass | pass
|
1.22.0
|
|
ncbi-tools6
|
|
6.1.20170106+dfsg2-7
|
2
|
pass | pass | pass
|
20170106
|
|
nibabel
|
|
5.4.2-4
|
1
|
pass | pass | pass
|
5.4.2
|
|
nifticlib
|
|
3.0.1-9.1
|
2
|
pass | pass | pass
|
3.0.1
|
|
nim-hts
|
|
0.3.25+ds-3
|
1
|
fail | pass | pass
|
0.3.31
|
|
node-shiny-server
|
|
1.5.20.1002-4
|
1 (1 RC)
|
|
1.5.23.1030
|
|
ntcard
|
|
1.2.2+dfsg-10
|
1
|
pass | pass | pass
|
1.2.2
|
|
odin
|
|
2.0.5-9
|
1
|
pass | pass | pass
|
2.0.5
|
|
openslide
|
|
3.4.1+dfsg-9
|
1
|
pass | pass | pass
|
4.0.1
|
|
openslide-python
|
|
1.4.3-1
|
1
|
neutral | neutral | neutral
|
1.4.6
|
|
orthanc
|
|
1.12.11+dfsg-8
|
2
|
pass | pass | pass
|
1.12.11
|
|
orthanc-postgresql
|
|
5.0+dfsg-7
|
1
|
|
10.1
|
|
paml
|
|
4.9j+dfsg-6
|
1
|
pass | pass | pass
|
|
|
parallel
|
|
20240222+ds-3
|
9
|
|
20260522
|
|
parsinsert
|
|
1.04-17
|
1
|
pass | pass | pass
|
1.04
|
|
pbdagcon
|
|
0.3+git20180411.c14c422+dfsg-10
|
1
|
pass | pass | pass
|
|
|
pbsuite
|
|
15.8.24+dfsg-8
|
1 (1 RC)
|
fail | fail | fail
|
15.8.24
|
|
picard-tools
|
|
3.4.0+dfsg-1
|
1 (1 RC)
|
pass | pass | pass
|
3.4.0
|
|
pixelmed
|
|
20251203+dfsg-2
|
4
|
|
20260608
|
|
pplacer
|
|
1.1~alpha19-8
|
2 (2 RC)
|
fail
|
1.1.alpha22
|
|
prime-phylo
|
|
1.0.11-14
|
1
|
pass | pass | pass
|
|
|
probabel
|
|
0.5.0+dfsg-6
|
1
|
pass | pass | pass
|
0.5.0
|
|
profbval
|
|
1.0.22-8
|
1
|
pass | pass | pass
|
0.No-Site
|
|
profphd-utils
|
|
1.0.10-7
|
1
|
pass | pass | pass
|
0.No-Site
|
|
proteinortho
|
|
6.3.1+dfsg-1
|
1
|
pass | pass | pass
|
|
|
psychopy
|
|
2023.2.4+dfsg-4
|
7 (2 RC)
|
pass | pass | fail
|
2026.2.0
|
|
psychtoolbox-3
|
|
3.0.22.2+dfsg-5
|
2
|
|
3.0.22.2
|
|
python-bcbio-gff
|
|
0.7.1-3
|
1
|
pass | pass | pass
|
0.7.1
|
|
python-biom-format
|
|
2.1.17-3
|
4
|
pass | pass | pass
|
2.1.17
|
|
python-colormath
|
|
3.0.0-4
|
1
|
neutral | neutral | neutral
|
3.0.0
|
|
python-csb
|
|
1.2.5+dfsg-10
|
1
|
pass | pass | pass
|
1.2.5
|
|
python-hdmedians
|
|
0.14.2-6
|
1
|
pass | pass | pass
|
0.14.2
|
|
python-hmmlearn
|
|
0.3.3-1
|
1
|
pass | pass | pass
|
0.3.3
|
|
python-loompy
|
|
3.0.8+dfsg-1
|
1
|
pass | pass | pass
|
3.0.8
|
|
python-mne
|
|
1.12.1-1
|
2
|
neutral | neutral | neutral
|
1.12.1
|
|
python-pbcore
|
|
2.1.2+dfsg-14
|
1 (1 RC)
|
pass | pass | fail
|
2.6.0
|
|
python-pynndescent
|
|
0.6.0-1
|
1 (1 RC)
|
fail | fail | pass
|
0.6.0
|
|
python-schema-salad
|
|
8.9.20260417192335-1
|
2
|
neutral | pass | pass
|
8.9.20260417192335
|
|
python-seqcluster
|
|
1.2.9+ds-7
|
1
|
|
|
|
python-skbio
|
|
0.6.3-2
|
1 (1 RC)
|
pass | pass | fail
|
0.7.3
|
|
q2-alignment
|
|
2024.5.0-1
|
1 (1 RC)
|
fail | fail | fail
|
2026.4.0
|
|
q2-cutadapt
|
|
2024.5.0-1
|
1
|
fail | fail | fail
|
2026.4.0
|
|
q2-demux
|
|
2024.5.0+dfsg-1
|
1 (1 RC)
|
fail | fail | fail
|
2026.4.0
|
|
q2-phylogeny
|
|
2024.5.0-1
|
2 (1 RC)
|
fail | fail | fail
|
2026.4.0
|
|
q2-types
|
|
2024.5.0-1
|
3 (1 RC)
|
fail | fail | fail
|
2026.4.0
|
|
q2cli
|
|
2024.5.0-2
|
1 (1 RC)
|
fail | fail | neutral
|
2026.4.0
|
|
q2templates
|
|
2024.5.0+ds-4
|
1
|
pass | pass | pass
|
2026.4.0
|
|
qcumber
|
|
2.3.0-3
|
2
|
pass
|
|
|
qiime
|
|
2024.5.0-1
|
2
|
fail | fail | fail
|
2026.4.0
|
|
qrisk2
|
|
0.1.20150729-8
|
1
|
pass | pass | pass
|
0.No-Track
|
|
r-bioc-biocgenerics
|
|
0.52.0-3
|
1 (1 RC)
|
pass | neutral | pass
|
0.58.1
|
|
r-bioc-biostrings
|
|
2.74.1+dfsg-3
|
1 (1 RC)
|
pass | fail | pass
|
2.80.1
|
|
r-bioc-delayedarray
|
|
0.32.0+dfsg-3
|
1 (1 RC)
|
pass | fail | pass
|
0.38.2
|
|
r-bioc-ebseq
|
|
2.4.0-3
|
1 (1 RC)
|
pass | pass | pass
|
2.10.0
|
|
r-bioc-genomeinfodb
|
|
1.42.3+dfsg-1
|
1 (1 RC)
|
fail | fail | fail
|
1.48.0
|
|
r-bioc-rsamtools
|
|
2.22.0+dfsg-3
|
1 (1 RC)
|
pass | fail | pass
|
2.28.0
|
|
r-bioc-s4vectors
|
|
0.44.0+dfsg-3
|
2 (2 RC)
|
pass | neutral | pass
|
0.50.1
|
|
r-bioc-shortread
|
|
1.64.0-4
|
1 (1 RC)
|
pass | fail | pass
|
1.70.0
|
|
r-bioc-snpstats
|
|
1.56.0+dfsg-3
|
1 (1 RC)
|
pass | pass | pass
|
1.62.0
|
|
r-cran-bbmle
|
|
1.0.25.1-2
|
1
|
pass | fail | pass
|
1.0.25.1
|
|
r-cran-curl
|
|
7.1.0+dfsg-2
|
1
|
pass | fail | pass
|
7.1.0
|
|
r-cran-dplyr
|
|
1.2.1-2
|
1
|
pass | fail | pass
|
1.2.1
|
|
r-cran-igraph
|
|
2.3.2-1
|
1
|
pass | fail | pass
|
2.3.2
|
|
r-cran-openssl
|
|
2.4.2+dfsg-1
|
1
|
pass | fail | pass
|
2.4.2
|
|
r-cran-rcurl
|
|
1.98-1.19+dfsg-1
|
1
|
pass | pass | pass
|
1.98-1.19
|
|
r-cran-rmarkdown
|
|
2.30+dfsg-1
|
1
|
pass | fail | pass
|
2.31
|
|
r-cran-shiny
|
|
1.13.0+dfsg-1
|
2
|
pass | fail | pass
|
1.14.0
|
|
rapmap
|
|
0.15.0+dfsg-5
|
2
|
pass | pass | pass
|
0.15.0
|
|
relion
|
|
3.1.3-4
|
2 (2 RC)
|
neutral | neutral | neutral
|
5.1.0
|
|
relion-cuda
|
|
3.1.3-2
|
2 (2 RC)
|
fail | neutral | fail
|
5.1.0
|
|
routine-update
|
|
0.2.6
|
4
|
|
|
|
sambamba
|
|
1.0.1+dfsg-3
|
2
|
pass | pass | pass
|
1.0.1
|
|
sbmltoolbox
|
|
4.1.0-5.1
|
1
|
|
4.1.0
|
|
seqtools
|
|
4.44.1+dfsg-8
|
1 (1 RC)
|
pass | fail | pass
|
|
|
sift
|
|
6.2.1-2
|
2
|
|
|
|
sight
|
|
26.0.0-1
|
1
|
|
26.0.0
|
|
simde
|
|
0.8.4~rc3-5
|
2
|
pass | pass | pass
|
0.8.4-rc3
|
|
snakemake
|
|
7.32.4-11
|
2
|
pass | fail | pass
|
9.23.1
|
|
snap-aligner
|
|
2.0.5+dfsg-1
|
1
|
pass | pass | pass
|
2.0.5
|
|
sniffles
|
|
2.6.0-1
|
1
|
pass | pass | pass
|
2.8.0
|
|
sortmerna
|
|
4.3.7-3
|
1
|
neutral | neutral | neutral
|
6.0.2
|
|
spades
|
|
4.0.0+really3.15.5+dfsg-3
|
2
|
pass | pass | pass
|
4.3.0
|
|
spaln
|
|
3.0.7+dfsg-1
|
1
|
pass | pass | pass
|
|
|
t-coffee
|
|
13.45.0.4846264+really13.41.0.28bdc39+dfsg-1
|
1
|
pass | pass | pass
|
|
|
terraphast
|
|
0.1.0+dfsg-1
|
1 (1 RC)
|
pass | pass | pass
|
0.1.0
|
|
theseus
|
|
3.3.0-15
|
1
|
pass | pass | pass
|
|
|
tifffile
|
|
20260601-1
|
1
|
pass | pass | pass
|
2026.6.1
|
|
tipp
|
|
1.0+dfsg-4
|
1
|
|
1.0
|
|
tombo
|
|
1.5.1-9
|
1
|
pass | pass | pass
|
1.5.1
|
|
treeviewx
|
|
0.5.1+git20100823.7e4d0e9-4
|
1
|
|
0.5.1+git20100823.7e4d0e9
|
|
trinityrnaseq
|
|
2.15.2+dfsg-3
|
1
|
pass | fail | fail
|
2.15.2
|
|
uc-echo
|
|
1.12-19
|
1
|
pass | pass | pass
|
1_12
|
|
ugene
|
|
52.1+dfsg-1
|
2
|
|
53.1
|
|
umap-learn
|
|
0.5.9.post2+dfsg-1
|
4 (1 RC)
|
fail | pass | fail
|
0.5.12
|
|
umis
|
|
1.0.9-2
|
2 (1 RC)
|
fail | pass | pass
|
1.0.9
|
|
unifrac-tools
|
|
1.4-3
|
2
|
neutral | neutral | neutral
|
1.6.1
|
|
vg
|
|
1.59.0+ds-0.1
|
5 (2 RC)
|
pass | pass | fail
|
1.75.0
|
|
virulencefinder
|
|
2.0.5-2
|
1
|
pass | pass | pass
|
3.2.1
|
|
vt
|
|
0.57721+ds-3
|
1
|
pass | pass | pass
|
0.57721
|
|
xdffileio
|
|
0.3-4
|
1
|
|
0.No-Release
|
|
xmedcon
|
|
0.26.1-gtk3+dfsg-1
|
2
|
|
0.26.2-gtk3
|
|
yaha
|
|
0.1.83-3
|
1
|
pass | pass | pass
|
0.1.83
|
