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Debian Med

All team packages (1471) [hide table]
Package VCS Archive Bugs Tests Upstream
abacas
1.3.1-9 (Git) action needed
1.3.1-9 0 pass | pass | pass 1.3.1
abpoa 1.5.3-1 0 pass | pass | pass 1.5.4
abyss
2.3.10-2 (Git) action needed
2.3.10-1 1 pass | pass | pass 2.3.10
acedb
4.9.39+dfsg.02-10 (Git) action needed
4.9.39+dfsg.02-9 1 (1 RC) 4.9.39
activiz.net 1:1.0~git20111214-2 0
adapterremoval 2.3.4-1 0 pass | pass | pass 2.3.4
adun.app 0.81-15 0 0.No-Site
aegean 0.16.0+dfsg-4 1 pass | pass | pass 0.16.0
aeonbits-owner 1.0.12+ds-3 0 1.0.12
aeskulap 0.2.2-beta2+git20190406.ef77f01-4 0 0.2.2-beta2+git20140119.ea0a119
aevol 5.0+ds-4 0 pass | pass | pass 9.2
aghermann 1.1.2-5 0 1.1.2
alien-hunter 1.7-10 0 pass | pass | pass 0.No-Release
allelecount 4.3.0-3 1 pass | pass | pass 4.3.0
alter-sequence-alignment 1.3.4-8 0 pass | pass | pass 1.3.4
altree 1.3.2-2 3 pass | pass | pass
amap-align 2.2+git20080214.600fc29+dfsg-2 0 pass | pass | pass 2.2+git20080214.600fc29
amide 1.0.6-5 2 neutral | neutral 1.0.6
ampliconnoise 1.29-15 1 pass | pass | pass 1.29
andi
0.14-4 (Git) action needed
0.14-3 0 pass | pass | pass 0.14
anfo 0.98-8 0 0.No-Track
ants 2.5.4+dfsg-1 8 2.6.0
any2fasta 0.4.2-2 0 pass | pass | pass 0.4.2
aragorn 1.2.41-3 0 pass | pass | pass 1.2.41
arb
6.0.6-8 (Git) action needed
6.0.6-8 4 7.0
arcp 0.2.1-7 0 neutral | pass | pass 0.2.1
arden 1.0-6 0 pass | pass 0.No-Release
argh 1.3.2+ds-2 0 1.3.2
argtable2 13-4 0 13
ariba 2.14.7+ds-7 0 pass | pass | pass 2.14.7
art-nextgen-simulation-tools 20160605+dfsg-5 0 pass | pass | pass 20160605
artemis 18.2.0+dfsg-4 0 pass | pass | pass 18.2.0
artfastqgenerator 0.0.20150519-5 0 pass | pass | pass 0.0.20150519
assembly-stats
1.0.1+ds-6 (Git) action needed
1.0.1+ds-6 0 pass | pass | pass 1.0.1
assemblytics 1.2.1+dfsg-2 0 pass | pass 1.2.1
ataqv 1.3.1+ds-2 0 pass | pass | pass 1.3.1
atropos 1.1.32+dfsg-2 0 pass | pass | pass 1.1.32
augur
26.0.0-1 (Git) action needed
24.4.0-1 1 pass | pass | pass 31.0.0
augustus 3.5.0+dfsg-5 0 pass | pass | pass 3.5.0
autodock-vina 1.2.7-1 0 pass | pass | pass 1.2.7
autodocksuite 4.2.6-9 0 pass | pass | pass 4.2.6
autodocktools 1.5.7~rc1+cvs.20140424-1 0 1.5.6
axe-demultiplexer 0.3.3+dfsg-4 0 pass | pass | pass 0.3.3
baitfisher 1.2.7+git20211020.de26d5c+dfsg-2 0 pass | pass | pass 1.2.7+git20211020.de26d5c
bali-phy 4.0-1 0 pass | pass | pass 4.1~beta1
ball 1.5.0+git20180813.37fc53c-11 2 (1 RC) 1.5.0+git20220524.d85d2dd
bambamc 0.0.50-6 1 0.0.50
bamclipper 1.0.0-3 0 pass | pass | pass 1.0.0
bamkit 0.0.1+git20170413.ccd079d-3 0 pass | pass | pass 0.0.1+git20170413.ccd079d
bamtools 2.5.2+dfsg-6 1 pass | pass | pass 2.5.3
bandage 0.9.0-2 0 pass | pass | pass 0.9.0
barrnap 0.9+dfsg-4 0 pass | pass | pass 0.9
bart 0.9.00-3 0 pass | pass | pass 0.9.00
bart-cuda
(Git) action needed
0.8.00-2 2 (2 RC) fail | pass | fail 0.9.00
bart-view 0.3.00-1 0 0.3.00
bbhash
1.0.0-6 (Git) action needed
1.0.0-6 2 pass | pass | pass 1.0.0
bbmap 39.20+dfsg-2 0 pass | pass | pass 39.26
bcalm 2.2.3-5 0 pass | pass | pass 2.2.3
bcbio 1.2.9-3 1 (1 RC) neutral | neutral | neutral 1.2.9
bcftools 1.21-1 0 pass | pass | pass 1.21
beads 1.1.22-1 2 pass | pass | pass
beagle 241217-3 1 pass | pass | pass 250227
beast-mcmc 1.10.4+dfsg-6 2 1.10.4
beast2-mcmc 2.7.6+dfsg-1 1 pass | pass | pass 2.7.7
bedops 2.4.41+dfsg-3 0 pass | pass | pass 2.4.42
bedtools 2.31.1+dfsg-2 2 pass | pass | pass 2.31.1
berkeley-express 1.5.3+dfsg-3 0 pass | pass | pass 1.5.3
bifrost 1.3.1-1 1 pass | pass 1.3.5
bio-eagle 2.4.1-3 0 pass | pass | pass 2.4.1
bio-rainbow 2.0.4+dfsg-2 0 pass | pass | pass 2.0.4
bio-tradis 1.4.5+dfsg2-2 0 pass | fail 1.4.5
bio-vcf
0.9.5-4 (Git) action needed
0.9.5-3 0 pass | pass | pass 0.9.5
bioawk 1.0-5 0 pass | pass | pass 1.0
biobambam2
2.0.185+ds-3 (Git) action needed
2.0.185+ds-2 0 pass | pass | pass 2.0.185-release-20221211202123
biococoa 2.2.2-6 0 2.2.2
biococoa.app 1.6.0-8 0
biofox 1.6-1 0
biojava-live 1:1.9.7+dfsg-2 0 1.9.7
biojava3-live 3.1.0+dfsg-2 0
biojava4-live 4.2.12+dfsg-8 0 4.2.12
biojava5-live 5.4.0+dfsg-5 0 5.4.0
biojava6-live 6.1.0+dfsg-5 0 1.039
biomaj 1.2.3-11 0
biomaj-watcher 1.2.2-4+deb9u1 0
biomaj3 3.1.24-2 0 neutral | neutral | neutral 3.1.24
biomaj3-cli 3.1.11-5 0 neutral | neutral | neutral 3.1.11
biomaj3-core 3.0.28-4 0 pass | pass | pass 3.0.28
biomaj3-daemon 3.0.24-3 0 neutral | neutral | neutral 3.0.24
biomaj3-download 3.2.12-2 0 neutral | neutral | neutral 3.2.12
biomaj3-process 3.0.19-3 0 neutral | neutral | neutral 3.0.19
biomaj3-user 3.0.12-2 0 neutral | neutral | neutral 3.0.12
biomaj3-zipkin 0.2.2-3 0 neutral | neutral | neutral 0.2.2
bioperl 1.7.8-1 0 pass | pass | pass 1.7.8
bioperl-run 1.7.3-13 0 pass | pass | pass 1.7.3
bioruby 1.4.0-2 0
biosig 3.9.0-1 0 neutral | neutral | neutral 3.9.0
biosig4c++ 1.9.3-2 0 2.0.2
biosquid 1.9g+cvs20050121-15.1 0 pass | pass | pass 1.9g
biosyntax 1.0.0b-6 0 1.0.0
bitops 1.0-6-1 0
bitseq
0.7.5+dfsg-7 (Git) action needed
0.7.5+dfsg-6 1 0.7.5
blasr 5.3.5+dfsg-7 0 pass | pass | pass 0.No-Site
blimps 3.9+ds-4 0 3.9
bmtk
1.1.1+ds-5 (Git) action needed
1.1.1+ds-4 0 pass | pass | pass 1.1.2
bolt-lmm 2.4.1+dfsg-2 0 pass | pass | pass 2.4.1
bowtie
1.3.1-4 (Git) action needed
1.3.1-3 0 pass | pass | pass 1.3.1
bowtie2 2.5.4-1 0 pass | pass | pass 2.5.4
boxshade 3.3.1-14 0 pass | pass | pass 0.No-Release
bppphyview 0.6.1-5 0 0.6.1
bppsuite 2.4.1-7 0 pass | pass | pass 2.4.1
brian 2.8.0.4-1 0 pass | pass | pass 2.9.0
brig
0.95+dfsg-3 (Git) action needed
0.95+dfsg-3 0 0.95
btllib 1.7.5+dfsg-2 1 pass | pass 1.7.5
busco 5.5.0-3 0 pass | pass | pass
bustools 0.43.2+dfsg-1 1 pass | pass | pass 0.45.0
bwa 0.7.18-1 0 pass | pass | pass 0.7.19
bwa-mem2
2.2.1-1 (Git) action needed
2.2.1-1 0 pass
caftools 2.0.3-1 0 2.0.2
cain 1.10+dfsg-3 0 1.10
camitk 5.2.0-5 0 pass | pass | pass 5.2.0
camp 0.8.4-4.1 1 0.8.4
canu
2.3+dfsg-1 (Git) action needed
2.2+dfsg-5 0 fail 2.3
capsule-maven-nextflow 1.0.3.1+dfsg-5 0 1.0.3.1
capsule-nextflow 1.1.1+dfsg-1 0 pass | pass | pass 1.1.1
cassiopee 1.0.9-4 0 pass | pass | pass 1.0.9
castxml 0.6.11-1 0 0.6.11
cat-bat 5.3-2 0 pass | pass 6.0.1
catools 1.12-2 0
cct 1:1.0.3-1 0 pass | pass | pass 1.0.3
cd-hit
4.8.1-5 (Git) action needed
4.8.1-4 0 pass | pass | pass 4.8.1
cdbfasta 1.00+git20230710.da8f5ba+dfsg-1 0 pass | pass | pass 1.00+git20230710.da8f5ba
cde 0.1+git9-g551e54d-2 1 0.No-Release
centrifuge
1.0.4.2-1 (Git) action needed
1.0.4.2-1 0 pass | pass | pass 1.0.4.2
cfflib 2.0.5-3 0 2.0.5
cgview 0.0.20100111-7 0 pass | pass | pass 0.No-Release
changeo 1.3.0-3 0 pass | pass | pass 1.3.3
charls 2.4.2-2 0 2.4.2
chip-seq 1.5.5-3 0 pass | pass | pass 1.5.5
chromhmm 1.26+dfsg-3 1 pass | pass | pass 1.26
chromimpute 1.0.3+dfsg-5 0 neutral | neutral | neutral 1.0.3
cif-tools 1.0.12-4 0 pass | pass | pass 1.0.12
ciftilib
1.6.0-2.1 (Git) action needed
1.6.0-2.1 0 pass | pass | pass 1.6.0
circlator 1.5.6-13 0 pass | pass | pass 1.5.5
circos 0.69.9+dfsg-2 0 pass | pass | pass
circos-tools 0.23-1 0
civetweb 1.16+dfsg-2 0 1.16
clearcut 1.0.9+git20211013.b799afe-1 0 pass | pass | pass 1.0.9+git20211013.b799afe
clinica 0.3.0-1 0
clonalframe 1.2-11 0 pass | pass | pass 1.2
clonalframeml 1.13-1 0 pass | pass 1.13
clonalorigin 1.0-8 0 pass | pass 1.0
clustalo 1.2.4-8 0 pass | pass | pass 1.2.4
clustalw
2.1+lgpl-7 (Git) action needed
2.1+lgpl-7 0 pass | pass | pass 2.1
clustalw-mpi 0.15-3 0
clustalx 2.1+lgpl-9 0 2.1
cluster3 1.59+ds-5 0 pass | pass | fail 1.59
cmtk
3.3.1p2+dfsg-3 (Git) action needed
3.3.1p2+dfsg-3 0 3.4.0
cnvkit 0.9.12-1 0 pass | pass | pass 0.9.12
codonw 1.4.4-8 0 pass | pass | pass 1.4.4
coils 2002-9 1 pass | pass | pass 0.No-Release
colt 1.2.0+dfsg-2 0
concavity 0.1+dfsg.1-6 0 pass | pass | pass 0.No-Release
concurrentqueue 1.0.4+ds-2 0 pass | pass | pass 1.0.4
conda-package-handling 2.3.0-1 0 pass | pass | pass 2.4.0
conda-package-streaming 0.10.0-1 0 pass | pass | pass 0.11.0
conquest-dicom-server 1.4.17d-1 0
consensuscore 1.1.1+dfsg-8 1 neutral | neutral | neutral 0.No-Release
consensuscore2 0.13.0+20160719-1 0
conservation-code 20110309.0-8 0 pass | pass | pass 0.No-Release
covtobed 1.3.5+dfsg-2 0 pass | pass | pass 1.3.5
crac 2.5.2+dfsg-6 1 pass | pass | pass
ctdconverter 2.1-8 0 neutral | neutral | neutral 3.0a1
ctdopts 1.5-5 0 pass | pass | pass 1.5
ctffind 4.1.14-3 0 5.0.2
ctk 0.1.0+git20131105~b8307961b6-2 0
ctn 3.2.0~dfsg-8 1 3.2.0
ctn-doc 3.0.6-3 0
ctsim 6.0.2-6 0 neutral | neutral | neutral
cufflinks 2.2.1+dfsg.1-10 0 2.2.1
cutesv 2.1.1-1 1 neutral | neutral 2.1.2
cwlformat 2022.02.18-3 0 pass | pass | pass 2022.02.18
cwltest 2.5.20241122133319-1 0 pass | pass 2.6.20250314152537
cwltool 3.1.20250110105449-3 0 pass | pass | pass 3.1.20250110105449
cycle 0.3.3-2 5 0.3.3
cyvcf2 0.31.1-2 0 pass | pass | pass 0.31.1
daligner 1.0+git20240119.335105d-3 0 pass | pass | pass 1.0+git20240119.335105d
damapper 0.0+git20240314.b025cf9-1 0 pass | pass | pass 0.0+git20240314.b025cf9
dascrubber 1.1-4 0 pass | pass | pass 1.1
datatables.js
1.11.5+dfsg-2 (Git) action needed
1.11.5+dfsg-2 0 2.3.1
dawg 1.2-4 1 neutral | neutral | neutral 1.2
dazzdb 1.0+git20250217.a3eefd4-1 0 pass | pass | pass 1.0+git20250217.a3eefd4
dcm2niix 1.0.20241211-1 0 pass | pass | pass 1.0.20241211
dcmstack
0.9-4 (Git) action needed
0.9-3 0 pass | pass | pass 0.9
dcmtk 3.6.9-5 5 pass | pass | pass 3.6.9
dcmtkpp 0.3.1-3 0
debian-med 3.9.0 0
deblur 1.1.1-4 0 neutral | neutral 1.1.1
deepnano 0.0+git20170813.e8a621e-3.1 0 fail | fail 0.0+git20170813.e8a621e
delly 1.1.8-1 0 pass | pass | pass 1.3.3
density-fitness
1.1.4-1 (Git) action needed
1.1.3-1 0 pass | pass | pass 1.1.4
dextractor 1.0-6 0 1.0
dialign
2.2.1-14 (Git) action needed
2.2.1-13 0 pass | pass | pass 2.2.1
dialign-t 1.0.2-15 0 pass | pass | pass
diamond-aligner 2.1.11-2 0 pass | pass | pass 2.1.11
dichromat 2.0.0-3 0
dicom3tools 1.00~20240118131615-1 6 pass | pass | pass 1.00~20250128115421
dicomnifti 2.33.1-5 0 pass | pass | pass 2.33.1
dicompyler 0.4.2.0-2 0 0.4.2.0+git20220201.ffba3a8
dicomscope 3.6.0-27 0 3.6.0
dindel 1.01-wu1-3+dfsg-1 0 1.01-wu1-3
dipy 1.11.0-2 0 pass | pass | pass 1.11.0
discosnp 1:2.6.2-4 0 pass | pass | pass 2.6.2
disulfinder 1.2.11-12 0 pass | pass | pass 0.No-Site
dnaclust
3-7 (Git) action needed
3-7 0 pass | pass | pass 3
dnapi 1.1-3 0 pass | pass | pass 1.1
dnarrange 1.5.3-1.1 0 pass | pass | pass 1.6.3
dotur 1.53-2 0
drmaa 0.7.9-3 0 neutral | neutral | neutral 0.7.9
drop-seq 3.0.2+dfsg-1 0 pass | pass | pass 3.0.2
dssp
4.4.10-1 (Git) action needed
4.4.10-1 0 pass | pass | pass 4.5.3
dwgsim 0.1.14-3 1 pass | pass | pass 0.1.14
e-mem 1.0.1-5 0 pass | pass | pass 1.0.1
ea-utils
1.1.2+dfsg-10 (Git) action needed
1.1.2+dfsg-9 1 pass | pass | pass 0.No-Track
ecopcr 1.0.1+dfsg-5 0 pass | pass | pass 1.0.1
edfbrowser 2.12+dfsg-1 0 neutral | neutral | neutral 2.12
edflib 1.27-1 0 pass | pass | pass 1.27
edtsurf 0.2009-10 0 pass | pass | pass 0.No-Release
eegdev 0.2-10 0 0.2
eigensoft 8.0.0+dfsg-2 0 pass | pass | pass 8.0.0
elastix 5.2.0-2 0 5.2.0
elph 1.0.1-5 0 pass | pass | pass 1.0.1
embassy-domainatrix 0.1.660-5 0 0.1.660
embassy-domalign 0.1.660-5 0 0.1.660
embassy-domsearch 1:0.1.660-4 0 0.1.660
embassy-phylip 3.69.660-3 0 3.69.660
emboss 6.6.0+dfsg-15 5 pass | pass | pass 6.6.0
emboss-explorer 2.2.0-12 0 fail 2.2.0
emmax 0~beta.20100307-5 0 pass | pass | pass 0.No-Release
emperor 1.0.4+ds-1 1 pass | pass | pass 1.0.4
enlighten 1.11.2-1 1 1.14.1
epcr 2.3.12-1-10 1 pass | pass | pass 0.No-Release
epigrass 3.0.0+dfsg-1 0 fail
estscan 3.0.3-6 0 pass | pass | pass 3.0.3
examl 3.0.22-6 2 pass | pass | pass 3.0.22
exonerate 2.4.0-5 0 pass | pass | pass
f2j 0.8.1+dfsg-5 2 0.8.1
falcon 1.8.6-1.1 0 2.1.4
falconkit 0.7-1 0
fast5 0.6.5-9 0 pass | pass | pass 0.6.5
fasta3 36.3.8i.14-Nov-2020-3 1 fail | pass | pass 36.3.8i.14-Nov-2020
fastani 1.33-3 0 pass | pass | pass
fastaq 3.17.0-9 0 pass | pass | pass 3.17.0
fastdnaml 1.2.2-18 0 pass | pass | pass 1.2.2
fastlink
4.1P-fix100+dfsg-4 (Git) action needed
4.1P-fix100+dfsg-5 1 pass | pass | pass 0.No-Release
fastml 3.11-4 0 0.No-Site
fastp 0.24.0+dfsg-1 0 pass | pass | pass 0.24.1
fastq-pair 1.0-3 0 pass | pass | pass 1.0
fastqc 0.12.1+dfsg-4 0 pass | pass | pass 0.12.1
fastqtl 2.184+v7+dfsg-4 0 pass | pass | pass 7
fasttree 2.1.11-2 0 pass | pass | pass
fastx-toolkit 0.0.14-6 0 pass | pass 0.0.14
fermi-lite 0.1+git20221215.85f159e-1 0 pass | pass | pass 0.1+git20221215.85f159e
ffindex 0.9.9.9-7 0 pass | pass | pass 0.9.9.9
figtree 1.4.4-6 0 pass | pass | pass 1.4.4
filo 1.1.0-3 0
filtlong 0.2.1-4 0 pass | pass | pass 0.2.1
fis-gtm 7.1-006-1 2 7.1-007
fitgcp 0.0.20150429-5 0 pass | pass | pass 0.No-Release
flash 1.2.11-2 0 pass | pass | pass 1.2.11
flexbar
1:3.5.0-5 (Git) action needed
1:3.5.0-5 0 pass | pass | pass 3.5.0
flye 2.9.5+dfsg-1 0 pass | pass | pass 2.9.6
freebayes 1.3.9-1 0 pass | pass | pass 1.3.9
freecontact
1.0.21-15 (Git) action needed
1.0.21-15 1 pass | pass | pass 0.No-Site
freediams 0.4.2-1 0
freemedforms-project 0.9.4-2 0
fsa 1.15.9+dfsg-6 0 pass | pass | pass 1.15.9
fsm-lite 1.0-8 0 pass | pass | pass 1.0
fw4spl 17.2.0-2 0 17.2.0
g2 0.72-13 0 0.72
galileo 0.5.1-11 0 neutral | neutral | neutral 0.5.1
garli 2.1-9 0 pass | pass | pass 2.1
gasic
0.0.r19-8 (Git) action needed
0.0.r19-8 0 pass | pass | pass 0.0.r16
gatb-core 1.4.2+dfsg-13 2 pass | pass | pass 1.4.2
gatk-bwamem 1.0.4+dfsg2-3 1 1.0.4
gatk-fermilite 1.2.1+dfsg-2 0 1.2.1
gbrowse 2.56+dfsg-12 2 pass | pass | pass 2.56
gdcm 3.0.24-5 6 pass | pass | pass 3.0.25
gdpc 2.2.5-16 2 pass | pass | pass 0.No-Release
gemma 0.98.5+dfsg-3 0 pass | pass | pass 0.98.5
genometester 4.0+git20200511.91cecb5+dfsg-1 0 pass | pass | pass 4.0+git20221122.71e6625
genomethreader 1.7.3+dfsg-10 1 pass | pass | pass 1.7.3
genometools 1.6.5+ds-2.2 1 pass | pass | pass 1.6.5
genomicsdb 1.5.4-5 2 (1 RC) pass | pass | pass 1.5.5
gentle 1.9.5~alpha2+dfsg1-2 1 1.9.5~alpha2
getdata 0.2-4 1 0.No-Track
gfapy 1.2.3+dfsg-3 0 pass | pass | pass 1.2.3
gff2aplot 2.0-15 0 pass | pass | pass 2.0
gff2ps 0.98l-6 0 pass | pass | pass 0.98l
gffread 0.12.7-8 0 fail | pass | pass 0.12.7
ggd-utils 1.0.0+ds-1 0 pass | fail | fail 1.0.0
ghmm 0.9~rc3-11 0 pass | pass 0.9~rc3
gifticlib 1.0.9-6 0 pass | pass | pass 1.0.9
giira 0.0.20140625-2 0 0.No-Release
ginkgocadx 3.8.8-5 0 3.8.8
gjh-asl-json 0.0+git20210628.867c5da-1 0 pass | pass | pass 0.0+git20221003.d3546e6
glam2 1064-10 0 pass | pass | pass 0.No-Site
gmap 2024-11-20+ds-2 0 pass | pass | pass 2025-04-19
gnuhealth 2.4.1-2 0
gnumed-client 1.8.21+dfsg-1 0 neutral | neutral | neutral 1.8.21
gnumed-server 22.31-1 0 22.31
gofigure2 0.9.0-3 0
golang-github-dataence-porter2 0.0~git20150829.56e4718-5 0 pass | pass | pass 0.0~git20150829.56e4718
grabix 0.1.7-5 0 pass | pass | pass 0.1.7
graphlan 1.1.3-6 0 pass | pass | pass 1.1.3
grinder 0.5.4-6 0 pass | pass | pass 0.5.4
gsort
0.1.4-3 (Git) action needed
0.1.4-3 0 pass | pass | pass 0.1.4
gtable 0.2.0-1 0
gubbins
3.4-2 (Git) action needed
3.4-2 0 pass | pass | pass 3.4
gwama 2.2.2+dfsg-6 0 pass | pass | pass
gwyddion 2.67-1 1 3.3
h5sparse 0.1.0-8 0 pass | pass | pass 0.1.0
harmonypy
0.0.9-3 (Git) action needed
0.0.9-3.1 0 neutral | neutral | neutral 0.0.10
harvest-tools 1.3-8 0 pass | pass | pass 1.3
hdmf 3.14.5-1 0 pass | pass | pass 4.0.0
heudiconv 1.3.2-1 0 pass | pass | neutral 1.3.3
hhsuite 3.3.0+ds-8 0 pass | pass | pass 3.3.0
hilive
2.0a-4 (Git) action needed
2.0a-4 1 (1 RC) pass | pass | pass 2.0a
hinge
0.5.0-8 (Git) action needed
0.5.0-7 4 0.5.0
hisat2 2.2.1-5 2 pass | pass | pass 2.2.1
hmmer 3.4+dfsg-2 1 pass | pass | pass 3.4
hmmer2 2.3.2+dfsg-12 0 pass | pass | pass 2.3.2
hnswlib 0.8.0-1 0 pass | pass | pass 0.8.0
hopscotch-map 2.3.1-1 0 pass | pass | pass 2.3.1
hts-nim-tools 0.2.1-2 0 pass | pass | fail 0.2.1
htscodecs 1.6.1-2 0 1.6.3
htseq 2.0.9+dfsg-1 0 neutral | neutral | neutral 2.0.9
htsjdk 4.1.3+dfsg-2 0 pass | pass | pass 4.2.0
htslib 1.21+ds-1 0 pass | pass | pass 1.21
hunspell-en-med 0.0.20140410-6 0 pass | pass | pass 0.0.20140410
hyphy 2.5.69+dfsg-1 0 pass | pass | pass 2.5.73
icb-utils 2.0.1+git20161002.afee1d9-5 0 2.0.1+git20161002.afee1d9
idba 1.1.3-8 0 pass | pass | pass 1.1.3
idseq-bench 0.0~git20210602.27fb6dc-2 0 pass | pass | pass
igdiscover 0.11-3 0 neutral | neutral | neutral 0.15.1
igor 1.4.0+dfsg-5 0 pass | pass | pass 1.4.0
igraph 0.10.15+ds-3 0 pass | pass | pass 0.10.15
igstk 4.4.0-2 0
igv 2.18.5+dfsg-1 0 2.19.3
iitii 0.0+git20191030.85209e0-3 1 fail 0.0+git20191030.85209e0
illustrate 0.0+git20200923.217db48-2 0 pass | pass | pass 0.0+git20240817.e469df4
imagej 1.54g-1 0 neutral | neutral | neutral
imagevis3d 3.1.0-7 0 3.1.0
imbalanced-learn 0.12.4-1 0 pass | pass | pass 0.13.0
indelible 1.03-6 0 pass | pass | pass 0.No-Site
indexed-gzip 1.8.7-3 0 pass | pass | pass 1.9.4
infernal 1.1.5-3 0 pass | pass | pass 1.1.5
insighttoolkit 3.20.1+git20120521-5 0
insighttoolkit4 4.13.3withdata-dfsg2-4 0
insighttoolkit5 5.4.3-5 1 5.4.3
insilicoseq 2.0.1-1 0 pass | pass | pass 2.0.1
intake
0.6.6-4 (Git) action needed
0.6.6-3 5 (2 RC) pass | pass | fail 2.0.8
invesalius 3.1.99998-7 1 neutral | neutral | neutral 3.1.99998
ipig 0.0.r5-5 0 0.0.r5
iqtree
2.3.4+dfsg-1 (Git) action needed
2.0.7+dfsg-1 1 pass | pass | pass 2.0.7
ismrmrd 1.8.0-2 1 pass | pass | pass 1.14.2
itkadaptivedenoising 0.0+git20240907.9a7adca-1 0 pass | pass 0.0+git20250309.853934c
itkgenericlabelinterpolator 1.2.1-2 0 pass | pass 1.3.0
iva 1.0.11+ds-6 0 pass | pass | pass 1.0.11
ivar 1.4.4+dfsg-1 1 pass | pass | pass 1.4.4
jai-core 1.1.4-3 0
jai-imageio-core 1.2-3 0
jaligner
1.0+dfsg-11 (Git) action needed
1.0+dfsg-11 0 pass | pass | pass 1.0
jam-lib 0.1.git20240425.aec45be+dfsg-1 0 0.1.git20240425.aec45be
jebl2 0.1+git20230701.b3c0f25-1 0 0.1+git20231105.51da3b1
jellyfish
2.3.1-5 (Git) action needed
2.3.1-4 3 pass | pass | pass 2.3.1
jellyfish1 1.1.11-10 1 pass | pass | pass 1.1.11
jheatchart 0.6-2 0 0.6
jlapack 0.8~dfsg-6 0 0.No-Release
jmodeltest 2.1.10+dfsg-12 2 (1 RC) 2.1.10
kalign 1:3.4.0-1 0 pass | pass | pass 3.4.0
kallisto
0.51.1+dfsg-1 (Git) action needed
0.48.0+dfsg-4 2 pass | pass | pass 0.51.1
kaptive
3.0.0-1 (Git) action needed
2.0.8-1 0 pass | pass | pass 3.1.0
khmer
3.0.0~a3+dfsg-8 (Git) action needed
3.0.0~a3+dfsg-9~0exp 0 pass | fail | pass 3.0.0~a3
kineticstools 0.6.1+git20220223.1326a4d+dfsg-6 1 pass | pass | pass 0.6.1+git20220223.1326a4d
king 2.24+dfsg2-2 1 2.24
king-probe
02.23-1 (Git) action needed
02.21-1 0 pass | pass | pass 02.26
kissplice 2.6.7-2 0 pass | pass | pass 2.6.7
kleborate 2.4.1-5 0 pass | pass | pass 3.1.3
klustakwik
3.0.2+ds-2 (Git) action needed
3.0.2+ds-2 0 pass | pass | pass 3.0.1
kma 1.4.21-1 0 pass | pass | pass 1.5.0
kmc 3.2.4+dfsg-1 0 pass | pass | pass 3.2.4
kmer 0~20150903+r2013-9 2 pass | pass | pass 0.No-Release
kmer-tools 0~20150903+r2013-1~bpo8+1 0
kmerresistance
2.2.0-5 (Git) action needed
2.2.0-4 1 2.2.0
kraken 1.1.1-4 0 pass | pass | pass 1.1.1
kraken2 2.1.3-1 0 pass | pass | pass 2.14
labeling 0.2-1 0
lagan 2.0-10 0 pass | pass | pass
lamarc 2.1.10.1+dfsg-7 0
lamassemble 1.7.2-2 0 pass | pass | pass 1.7.2
lambda-align
1.0.3-6 (Git) action needed
1.0.3-6 0 pass | pass | pass 1.0.3
lambda-align2
2.0.1-4 (Git) action needed
2.0.1-3 0 pass | pass | pass 2.0.1
last-align 1609-1 1 pass | pass | pass 1639
lastz 1.04.22-2 1 pass | pass | pass 1.04.52
lefse 1.1.2-2 0 pass | pass | pass 1.1.2
libace-perl 1.92-12 1 neutral | neutral | neutral 1.92
libai-fann-perl
0.10-5 (Git) action needed
0.10-5 1 pass | pass | pass 0.10
libamplsolver 0~20190702-4 0 0.No-Release
libargparse 3.2-1 0 3.2
libargs
6.3.0-1 (Git) action needed
6.4.1-1 0 pass | pass | pass 6.4.7
libatomic-queue 1.6.5-2 1 pass | fail | fail 1.6.9
libatomicbitvector 0.0+git20200519.e295358-3 0 pass | pass | pass 0.0+git20200519.e295358
libbigwig
0.4.7+dfsg-4 (Git) action needed
0.4.7+dfsg-3.1 0 pass | pass | pass 0.4.8
libbio-alignio-stockholm-perl
1.7.3-2 (Git) action needed
1.7.3-2 0 pass | pass | pass 1.7.3
libbio-cluster-perl 1.7.3-6 0 pass | pass | pass 1.7.3
libbio-coordinate-perl 1.7.1-4 0 pass | pass | pass 1.7.1
libbio-das-lite-perl 2.11-9 0 pass | pass | pass 2.11
libbio-db-biofetch-perl
1.7.3-4 (Git) action needed
1.7.3-4 0 neutral | neutral | neutral 1.7.3
libbio-db-embl-perl 1.7.4-4 0 neutral | neutral | neutral 1.7.4
libbio-db-hts-perl 3.01-5 1 pass | pass | pass 3.01
libbio-db-ncbihelper-perl 1.7.8-1 0 neutral | neutral | neutral 1.7.8
libbio-db-refseq-perl 1.7.4-2 0 pass | pass | pass 1.7.4
libbio-db-seqfeature-perl 1.7.5-1 0 pass | pass | pass 1.7.5
libbio-db-swissprot-perl 1.7.4-2 0 pass | pass | pass 1.7.4
libbio-eutilities-perl 1.77-3 0 pass | pass | pass 1.77
libbio-featureio-perl
1.6.905-2 (Git) action needed
1.6.905-2 0 pass | pass | pass 1.6.905
libbio-graphics-perl
2.40-6 (Git) action needed
2.40-6 0 pass | pass | pass 2.40
libbio-mage-perl 20030502.3-6 0 pass | pass | pass
libbio-mage-utils-perl 20030502.0-5 0
libbio-procedural-perl 1.7.4-5 0 pass | pass | pass 1.7.4
libbio-tools-run-remoteblast-perl
1.7.3-3 (Git) action needed
1.7.3-3 0 pass | pass | pass 1.7.3
libbio-variation-perl 1.7.5-3 0 pass | pass | pass 1.7.5
libbiod 0.2.3+git20191120.b8eecef-2 0 0.2.3
libbioparser-dev 3.1.0-2 0 3.1.0
libbiosoup-dev 0.11.0-3 0 0.11.0
libbitarray 2.0-3 0 pass | pass | pass 2.0
libbpp-core 2.4.1-13 0 2.4.1
libbpp-phyl 2.4.1-11 0 2.4.1
libbpp-phyl-omics 2.4.1-7 0 2.4.1
libbpp-popgen 2.4.1-11 0 2.4.1
libbpp-qt 2.4.1-12 0 2.4.1
libbpp-raa 2.4.1-9 0 2.4.1
libbpp-seq 2.4.1-13 0 2.4.1
libbpp-seq-omics 2.4.1-12 0 2.4.1
libcereal 1.3.2+dfsg-5 0 pass | pass | pass 1.3.2
libchado-perl
1.31-7 (Git) action needed
1.31-6 3 fail 1.31
libcifpp
7.0.9-1 (Git) action needed
7.0.9-1 1 pass | pass | pass 8.0.1
libcolt-free-java 1.2.0+dfsg-8 0 1.2.0
libctapimkt 1.0.5~rc1-9 0 0.No-Track
libdeflate 1.23-2 0 pass | pass | pass 1.24
libdisorder 0.0.2+git20130809.8062ee1-4 0 pass | pass | pass 0.0.2+git20130809.8062ee1
libdistlib-java 1.0-5 0 pass | pass | pass 1.0
libdivsufsort 2.0.1-6 0 2.0.1
libedlib 1.2.7-6 0 pass | pass | pass 1.2.7
libfastahack 1.0.0+dfsg-11 0 pass | pass | pass 1.0.0
libflathashmap 0.0+git20180715.2c46874-2 0 0.0+git20180715.2c46874
libfreecontact-perl
0.08-10 (Git) action needed
0.08-10 1 pass | pass | pass 0.No-Site
libgclib 0.12.7+ds-6 0 pass | pass | pass 0.12.8
libgdf 0.1.3-11.1 0 pass | pass | pass 0.1.3
libgenome 1.3.11+svn20110227.4616-6 0 0.No-Release
libgenome-model-tools-music-perl 0.04-5 0 pass | pass | pass 0.04
libgenome-perl
0.06-7 (Git) action needed
0.06-7 0 pass | pass | pass 0.06
libgff 2.0.0-3 0 pass | pass | pass 2.0.0
libgkarrays 2.1.0+dfsg-4.2 0
libgo-perl 0.15-10 0 pass | pass | pass 0.15
libgoby-java 3.3.1+dfsg2-11 0 pass | pass | pass 3.3.1
libgtextutils 0.7-9 0 0.7
libgzstream 1.5+git20171107.9a20658-3 1 1.5+git20171107.9a20658
libhac-java 0.20110510+git20110510.8b2a326-1 0 0.20110510+git20110510.8b2a326
libhat-trie 0.1.2-3 0 pass | pass | pass 0.1.2
libhmsbeagle 4.0.1+dfsg-3 0 4.0.1
libhpptools 1.1.1-5 0 1.1.1
libhttp-nio-java 1.1.1+dfsg-1 0 1.1.1
libics 1.6.8-1 1 1.6.8
libips4o 0.0+git20190618.2206938-2 0 0.0+git20190618.2206938
libjbzip2-java 0.9.1-8 0 0.9.1
libjloda-java 2.1+ds-3 0 2.1
libjung-free-java 2.1.1-3 0 2.1.1
libkmlframework-java 0.0.git20150825.a2e0518-1 0 0.0.git20150825.a2e0518
libla4j-java 0.6.0-4 0 0.6.0
libleidenalg
0.11.1-3 (Git) action needed
0.11.1-2 0 0.11.1
liblemon 1.3.1+dfsg-6 0 1.3.1
libmaus2 2.0.813+ds-4 4 2.0.813
libmcfp 1.3.5-2 0 pass | pass | pass 1.4.2
libmems 1.6.0+4725-11 0 0.No-Release
libmialm 1.0.9-4 0 1.0.9
libminc
2.4.06-2.1 (Git) action needed
2.4.06-2.1 1 fail 2.4.06
libmjson-java 1.4.0-3 0 1.4.0
libmmap-allocator 0.4.0+git20200122.adbfbe1-2.1 0 pass | pass | pass 0.4.0+git20200122.adbfbe1
libmmmulti 0.1-3 0 0.1
libmurmurhash
1.6-2 (Git) action needed
1.6-1 0 pass | pass | pass 1.6
libmuscle 3.7+4565-8 0 0.No-Release
libncl 2.1.21+git20210811.b1213a7-6 0 pass | pass | pass 2.1.21+git20231019.f845ec2
libnewuoa
0.1.2-2 (Git) action needed
0.1.2-1 0 pass | pass | pass 0.1.2
libomp-jonathonl
(Git) action needed
1.0.0-1 0 1.0.0
liboptions-java
0.0.20120113-3 (Git) action needed
0.0.20120113-3 0 0.No-Release
libpal-java 1.5.1+dfsg-9 0 1.5.1
libpdb-redo 3.2.1-1 0 pass | pass | pass 3.3.0
libpj-java 0.0~20150107+dfsg-5 0 pass | pass | pass 0.0~20150107
libpll 0.3.2-5 0 pass | pass | pass 0.3.2
libpsortb 1.0+dfsg-7 0
libqes 0.2.8+ds-1 0 0.2.8
libquazip 0.9.1-5 1 0.No-Track
librandom123 1.14.0+dfsg-6 0 1.14.0
librcsb-core-wrapper 1.005-13 1 neutral | neutral | neutral 1.005
librdp-taxonomy-tree-java
1.2.0-7 (Git) action needed
1.2.0-6 0 1.2.0
librg-blast-parser-perl 0.03-9 1 pass | pass | pass 0.No-Site
librg-exception-perl 1.0.3-5 0 0.No-Site
librg-utils-perl 1.0.43-9 0 0.No-Site
librostlab 1.0.20-14 0 pass | pass | pass 0.No-Site
librostlab-blast 1.0.1-14 0 pass | pass | pass 0.No-Site
libsbml 5.20.4+dfsg-0.1 1 neutral | neutral | neutral 5.20.5
libsecrecy 0.0.5+ds-4 0 pass | pass | pass 0.0.5
libseqlib 1.2.0+dfsg-11 0 1.2.0
libshrinkwrap
1.2.0-3 (Git) action needed
1.2.0-2 0 1.2.0
libsis-base-java 18.09~pre1+git20180928.45fbd31+dfsg-4 0 18.09~pre1+git20180928.45fbd31
libsis-jhdf5-java 19.04.1+dfsg-3 0 pass | fail | fail
libslow5lib 0.7.0+dfsg-3 4 pass | pass | pass 1.3.0
libsmithwaterman 0.0+git20160702.2610e25-12 0 pass | pass | pass 0.0+git20160702.2610e25
libsort-key-top-perl 0.08-4 1 pass | pass | pass 0.08
libssw
1.1-15 (Git) action needed
1.1-15 0 pass | pass | pass 1.2.5
libstatgen 1.0.15-8 0 1.0.15
libstreamvbyte
0.5.1-1 (Git) action needed
0.4.1-4 0 2.0.0
libtabixpp 1.1.2-2.1 0 pass | pass | pass 1.1.2
libtecla
1.6.3-3 (Git) action needed
1.6.3-3.1 2 1.6.3
libtfbs-perl 0.7.1+ds-4 2 pass | pass | pass 0.7.1
libthread-pool 4.0.0-2 0 pass | pass | pass 4.0.0
libundead 1.0.9-3 0 1.1.1
libvbz-hdf-plugin
1.0.2-3 (Git) action needed
1.0.2-3.1 0
libvcflib 1.0.12+dfsg-1 0 pass | pass | pass 1.0.14
libvistaio 1.2.19-3 1 1.2.19
libwfa2 2.3.3-4 0 2.3.5
libxdf
0.99.8+dfsg-4 (Git) action needed
0.99.8+dfsg-3 0 0.99.9
libzeep
6.1.1-1 (Git) action needed
5.1.8-1 1 pass | pass | pass 7.0.2
libzerg 1.0.7-11 0 pass | pass | pass 1.0.7
libzerg-perl 1.0.4-8 2 neutral | neutral | neutral 0.No-Site
libzstd 1.5.7+dfsg-1 8 pass | pass | pass 1.5.7
lighter 1.1.3-1 0 pass | pass | pass 1.1.3
logol 1.7.9+dfsg-6 0 pass | pass | pass 1.7.9
loki 2.4.7.4-12 0 pass | pass | pass 0.No-Site
ltrsift 1.0.2-10 3 1.0.2
lucy 1.20-6 0 pass | pass | pass 1.20
lumpy-sv 0.3.1+dfsg-7 1 pass | pass | pass 0.3.1
macs 3.0.2-1 0 pass | pass | pass 3.0.3
macsyfinder 2.1.4-1 0 pass | pass | pass 2.1.4
maffilter 1.3.1+dfsg-6 0 pass | pass | pass 1.3.1
mafft 7.505-1 1 pass | pass | pass 7.525
malt 0.5.2-3 0 0.5.2
mapdamage 2.2.2+dfsg-1 0 pass | pass | pass 2.2.2
mapsembler2 2.2.4+dfsg1-4 0 pass | pass | pass 2.2.4
maq 0.7.1-10 0 pass | pass | pass 0.7.1
maqview 0.2.5-12 0 pass | pass | pass 0.No-Site
mash 2.3+dfsg-6 0 pass | pass | pass 2.3
maude 3.4-1 1 3.5
mauve-aligner 2.4.0+4736-6 0 0.No-Release
maxflow 3.0.5-4 0 3.0.5
mcaller 1.0.3+git20210624.b415090-3 0 pass | pass | pass 1.0.3+git20210624.b415090
mcl 1:22-282+ds-4 1 pass | pass | pass 22-282
mcl14 14-137+ocaml-3 0 14-137
mecat2 0.0+git20200428.f54c542+ds-4 0 pass | pass | pass 0.0+git20200428.f54c542
med-doc 0.7 0
medicalterms 20230905-2 0 pass | pass | pass 20230905
megadepth
1.2.0-4 (Git) action needed
1.2.0-4 0 pass | pass | pass 1.2.0
megahit 1.2.9-5 1 pass | pass | pass 1.2.9
megan-ce 6.21.1+dfsg-4 0 6.21.1
melting 5.2.0-2 1 5.2.0
memoise 0.2.1-1 0
mencal 3.0-6 1 pass | pass | pass 3.0
metabat
2.17-1 (Git) action needed
2.15-4 0 pass | pass | pass 2.17
metaeuk 7-bba0d80+ds-1 0 pass | pass 7-bba0d80
metaphlan
4.0.4+ds-1 (Git) action needed
4.0.4-1 1 4.1.1
metaphlan2 2.9.22-1 0
metaphlan2-data 2.6.0+ds-4 2 0.No-Track
metastudent
2.0.1-11 (Git) action needed
2.0.1-10 0 pass | pass | pass 0.No-Site
metastudent-data 2.0.1-8 0 0.No-Site
metastudent-data-2 1.0.0-6 0 0.No-Site
mgltools-bhtree 1.5.7-3 0 1.5.6
mgltools-cadd 1.5.7-4 0 1.5.6
mgltools-cmolkit 1.5.7~rc1+cvs.20140424-2 0 1.5.6
mgltools-dejavu 1.5.7-3 0 1.5.6
mgltools-geomutils 1.5.7-3 0 1.5.6
mgltools-gle 1.5.7-3 0 1.5.6
mgltools-mglutil 1.5.7-4 0 1.5.6
mgltools-molkit 1.5.7-3 0 1.5.6
mgltools-networkeditor 1.5.7-4 0 1.5.6
mgltools-opengltk 1.5.7-3 0 1.5.6
mgltools-pmv 1.5.7~rc1+cvs.20140424-1 0 1.5.6
mgltools-pyautodock 1.5.7-3 0 1.5.6
mgltools-pybabel 1.5.7-3 0 1.5.6
mgltools-pyglf 1.5.7-3 0 1.5.6
mgltools-scenario 1.5.4.cvs.20090514-1 0
mgltools-scenario2 1.5.7-2 0 1.5.6
mgltools-sff 1.5.6~rc3~cvs.20120206-1 0 1.5.6
mgltools-support 1.5.7-3 0 1.5.6
mgltools-symserv 1.5.7-2 0 1.5.6
mgltools-utpackages 1.5.7-3 0 1.5.6
mgltools-viewerframework 1.5.7-3 0 1.5.6
mgltools-vision 1.5.7+dfsg-2 0 1.5.6
mgltools-visionlibraries 1.5.7-2 0 1.5.6
mgltools-volume 1.5.7-3 0 1.5.6
mgltools-webservices 1.5.7-3 0 1.5.6
mhap 2.1.3+dfsg-3 0 2.1.3
mia
2.4.7-14 (Git) action needed
2.4.7-13 1 (1 RC) 2.4.7
mialmpick 0.2.15-2 2 (1 RC) 0.2.15
miaviewit 1.0.5-3 0 1.0.4
microbegps 1.0.0-7 1 neutral | neutral 1.0.0
microbiomeutil 20101212+dfsg1-6 0 pass | pass | pass 20101212
milib 2.2.0+dfsg-1 0
minc 2.2.00-6 0
minc-tools
2.3.00+dfsg-12 (Git) action needed
2.3.00+dfsg-12 0 pass | pass | pass 2.3.00
mindthegap 2.3.0-4 0 pass | pass | pass 2.3.0
minia 3.2.6-4 0 pass | pass | pass 3.2.6
miniasm 0.3+dfsg-4 0 pass | pass | pass 0.3
minimac4 4.1.6-1 0 pass | pass | pass 4.1.6
minimap 0.2-8 0 pass | pass | pass 0.2
minimap2 2.27+dfsg-1 1 pass | pass | pass 2.29
mipe 1.1-9 0 pass | pass | pass 1.1
mira 4.9.6-11 0 pass | pass | pass 4.9.6
mirtop 0.4.30-1 0 pass | pass | pass 0.4.30
mlv-smile 1.47-10 1 pass | pass | pass 1.47
mmlib 1.4.2-2.1 0 1.4.2
mmseqs2
15-6f452+ds-3 (Git) action needed
15-6f452+ds-2 0 pass | pass | pass 17-b804f
mobyle 1.5.5+dfsg-6 0 1.5.5
mobyle-programs 5.1.2-3 0 5.1.2
mobyle-tutorials 1.5.0-4 0 1.5.0
molphy 2.3b3-5 0
mosdepth 0.3.10+ds-1 0 pass | pass | pass 0.3.11
mothur 1.48.1-1 0 pass | pass | pass 1.48.2
mpj 0.44+dfsg-4 0 0.44
mptp 0.2.5-1 1 pass | pass | pass 0.2.5
mrbayes 3.2.7a-7 0 pass | pass | pass 3.2.7a
mrc 1.3.15-2 0 pass | pass | pass 1.3.15
mriconvert 1:2.1.0-5 0
mricron 1.2.20211006+dfsg-6 0 1.2.20211006
mrs 6.0.5+dfsg-7 0 6.0.5
mrtrix3
3.0.4-2 (Git) action needed
3.0.4-1 0 3.0.5
mssstest
3.0-8 (Git) action needed
3.0-7 0 0.No-Release
mtj 0.9.14+dfsg-7 0 0.No-Track
multiqc 1.21+dfsg-2 1 pass | pass | pass 1.28
mummer 3.23+dfsg-8 0 pass | pass | pass 4.0.0.~beta5
mummy 1.0.3-2 0
murasaki 1.68.6-14 0 pass | pass | pass 1.68.6
muscle 1:5.1.0-1 1 pass | pass | pass 5.3
muscle3 3.8.1551-3 0 pass | pass | pass 3.8.1551
mustang 3.2.4-1 0 pass | pass | pass 3.2.4
mypy 1.15.0-5 1 pass | pass | pass 1.15.0
nanofilt 2.8.0-1 0 pass | pass | pass 2.8.0
nanolyse 1.2.0-4 0 pass | pass | pass 1.2.0
nanook 1.33+dfsg-6 0 pass | pass | fail 1.33
nanopolish 0.14.0-1 1 pass | pass | pass 0.14.0
nanostat 1.4.0-4 1 pass | pass | pass 1.4.0
nanosv 1.2.4+git20190409.c1ae30c-7 0 pass | pass | pass 1.2.4+git20190409.c1ae30c
ncbi-acc-download 0.2.8-3 0 pass | pass | pass 0.2.9
ncbi-blast+ 2.16.0+ds-7 5 pass | pass | pass 2.16.0
ncbi-entrez-direct 23.8.20250429+dfsg-1 0 pass | pass | pass 23.9.20250520
ncbi-igblast
1.20.0-2 (Git) action needed
1.20.0-2 2 pass | pass 1.22.0
ncbi-seg 0.0.20000620-7 1 pass | pass | pass 0.No-Release
ncbi-tools6 6.1.20170106+dfsg2-5 2 fail | pass | pass 6.1.20170106
ncbi-vdb 3.2.1+dfsg-2 0 3.2.1
neo 0.14.0-1 0 pass | pass 0.14.1
neobio 0.0.20030929-6 0 pass | pass | pass 0.No-Release
netlib-java 0.9.3-7 0 0.No-Track
ngmlr 0.2.7+git20210816.a2a31fb+dfsg-2 0 pass | pass | pass 0.2.7+git20210816.a2a31fb
ngs-sdk 2.10.9-1 0 pass | pass 3.0.1
nibabel 5.3.2-2 1 pass | pass | pass 5.3.2
nifti2dicom 0.4.11-3 0 pass | fail
nifticlib 3.0.1-9.1 1 pass | pass | pass 3.0.1
nim-hts 0.3.25+ds-2 0 pass | pass | fail 0.3.25
nim-kexpr 0.0.2-3 0 pass | pass | fail 0.0.2
nim-lapper 0.1.7-5 0 pass | pass | fail 0.1.7
nipy 0.6.1-1 0 neutral | pass | pass 0.6.1
nipype 1.9.2-2 1 pass | pass | pass 1.10.0
nitime 0.11-3 0 neutral | pass | pass 0.11
njplot 2.4-9 0 pass | pass | pass 2.4
node-shiny-server 1.5.20.1002-4 0 1.5.23.1030
norsnet 1.0.17-7 1 pass | pass | pass 0.No-Site
norsp 1.0.6-7 0 pass | pass | pass 0.No-Site
ntcard 1.2.2+dfsg-9 1 pass | pass | pass 1.2.2
nthash 2.3.0+dfsg-4 1 pass | fail | pass 2.3.0
nut-nutrition 20.1-2 0
nutsqlite 2.0.6-4 0 neutral | neutral | neutral 2.0.6
nxtrim 0.4.3+dfsg-4 0 pass | pass | pass 0.4.3
obitools
3.0.1~b26+dfsg-4 (Git) action needed
3.0.1~b26+dfsg-4 1 pass | pass 3.0.1~b26
odil 0.12.2-5 0 neutral | neutral | neutral 0.13.0
odin 2.0.5-7 0 pass | pass | pass 2.0.5
ont-fast5-api 4.1.3+dfsg-1 0 pass | pass | pass 4.1.3
opencfu 4.0.0+dfsg-2 1 4.0.0
openmolar 1.0.15-gd81f9e5-1 0
openslide 3.4.1+dfsg-7 1 pass | pass | pass 4.0.0
openslide-python 1.4.1-1 1 neutral | neutral | neutral 1.4.2
opensurgsim 0.7.0-11 0
optimir 1.2-2 0 pass | pass | pass 1.2
orthanc 1.12.7+dfsg-4 1 pass | pass 1.12.7
orthanc-dicomweb 1.20+dfsg-1 0 pass | pass 1.20
orthanc-gdcm 1.8+dfsg-1 0 1.8
orthanc-imagej
1.2+dfsg-4 (Git) action needed
1.2+dfsg-4 0
orthanc-mysql
5.0+dfsg-1 (Git) action needed
5.0+dfsg-1 0
orthanc-neuro
1.1+dfsg-1 (Git) action needed
1.1+dfsg-1 0 pass | pass 1.1
orthanc-postgresql
5.0+dfsg-3 (Git) action needed
5.0+dfsg-3 1 7.2
orthanc-python 5.0+ds-3 0 pass | pass 5.0
orthanc-webviewer 2.10+dfsg-1 0 pass | pass 2.10
orthanc-wsi 3.2+dfsg-7 0 pass | pass 3.2
oscar 1.5.3-2 0 1.5.3
pairtools 1.1.3-1 0 pass | pass | pass 1.1.3
pal2nal 14.1-3 0 pass | pass | pass 14.1
paleomix 1.3.8-2 0 pass | pass | pass 1.3.9
paml 4.9j+dfsg-6 0 pass | pass | pass 4.9j
papyrus 3.7.1+dfsg-6 0 0.No-Site
paraclu 10-1 0 pass | pass | pass
parafly 0.1.0-5 0 pass | pass | pass 0.1.0
parallel 20240222+ds-2 8 20250422
parallel-fastq-dump 0.6.7-3 0 pass | pass | pass 0.6.7
parasail 2.6.2+dfsg-2 0 pass | pass | pass 2.6.2
parsinsert 1.04-15 1 pass | pass | pass 1.04
parsnp 2.1.3+dfsg-1 0 pass | pass | pass 2.1.4
paryfor 0.1-8 0 pass | pass | pass 0.1
patman 1.2.2+dfsg-8 0 pass | pass | pass 0.No-Track
patsy 1.0.1-1 0 pass | pass | pass 1.0.1
pbalign 0.3.2-1 0 neutral | neutral 0.3.2
pbbam 2.4.0+dfsg-1 0 pass | pass | pass 2.4.0
pbbarcode 0.8.0-5 0 pass | fail 0.8.0
pbcopper
2.3.0+dfsg-3 (Git) action needed
2.3.0+dfsg-2 1 2.3.0
pbdagcon 0.3+git20180411.c14c422+dfsg-9 0 pass | pass | pass
pbgenomicconsensus 2.3.2-5 0 pass | fail 2.3.3
pbh5tools 0.8.0+git20170929.58d54ff+dfsg-1 0 pass | fail 0.8.0+git20181212.9fa8fc4
pbseqlib 5.3.5+dfsg-10 0
pbsim 1.0.3+git20180330.e014b1d+dfsg-3 0 pass | pass | pass 1.0.3+git20180330.e014b1d
pbsuite 15.8.24+dfsg-8 1 (1 RC) pass | fail | fail 15.8.24
pcalendar 3.4.1-6 0 3.4.1
pdb2pqr 3.6.1+dfsg-1 0 pass | pass | pass 3.7.1
peptidebuilder
1.1.0-3 (Git) action needed
1.1.0-3 0 pass | pass | pass 1.1.0
perlprimer 1.2.4-2 0 1.1.21
perm 0.4.0-8 0 pass | pass | pass 0.No-Site
permute 0.9-4-1 0
pftools 3.2.12-1 1 pass | pass | pass 3.2.12
phast 1.7+dfsg-2 1 pass | pass | pass 1.8
phipack 0.0.20160614-5 0 pass | pass | pass 0.No-Site
phy-spread 1.0.3-1 0
phybin 0.3-6 0 pass | pass | pass 0.3
phylip 1:3.697+dfsg-4 0 pass | pass | pass
phylonium 1.7-3 0 pass | pass | pass 1.7
phyml 3:3.3.20220408-4 0 pass | pass | pass 3.3.20250515
physamp 1.1.0-5 0 pass | pass | pass 1.1.0
phyutility 2.7.3+dfsg-4 0 2.7.3
phyx 1.3.2+ds-1 0 pass | pass | pass 1.3.2
picard-tools 3.3.0+dfsg-2 0 pass | pass | pass 3.4.0
picopore 1.2.0-3 0 pass | pass | pass 1.2.0
pigx-rnaseq 0.1.1-1 0 0.1.1
piler 0~20140707-4 0 0.No-Release
pilercr 1.06+dfsg-5 0 pass | pass | pass 1.06
pilon 1.24-4 0 pass | pass | pass 1.24
pinfish 0.1.0+ds-4 0 pass | pass | pass 0.1.0
pique 1.1-1 0 pass | pass 1.1
pirs 2.0.2+dfsg-12 0 pass | pass | pass 2.0.2
pixelmed 20250211+dfsg-2 4
pixelmed-codec 20200328-6 0 20200328
pizzly
0.37.3+ds-9 (Git) action needed
0.37.3+ds-9 0 pass | pass | pass 0.37.3
placnet 1.04-1 0 0.No-Track
plasmidid 1.6.5+dfsg-2 0 1.6.5
plasmidomics 0.2.0-10 0 0.No-Track
plasmidseeker 1.3+dfsg-3 0 1.3
plast 2.3.2+dfsg-10 2 pass | pass | pass 2.3.2
plastimatch 1.10.0+dfsg.1-1 0 pass | pass | pass 1.10.0
plink 1.07+dfsg-4 0 pass | pass | pass 1.07
plink1.9 1.90~b7.7-241022-2 0 pass | pass | pass 0.No-Track
plink2 2.00~a6.9-250129+dfsg-1 0 pass | pass | pass 2.00~a6.9-250515
plip 2.4.0+dfsg-4 0 pass | pass | pass 2.4.0
poa 2.0+20060928-10 0 pass | pass | pass 2.0
pondus 0.8.0-4 0 0.8.0
populations 1.2.33+svn0120106+dfsg-7 0 1.2.33
porechop
0.2.4+dfsg-6 (Git) action needed
0.2.4+dfsg-6 0 neutral | neutral | neutral 0.2.4
poretools 0.6.0+dfsg-7 0 pass | pass | pass 0.6.0
pp-popularity-contest 1.0.6-4 0
pplacer
1.1~alpha19-9 (Git) action needed
1.1~alpha19-8 1 (1 RC) pass 1.1~alpha19
praat 6.4.27+dfsg-2 0 pass | pass | pass 6.4.34
prank 0.0.170427+dfsg-3 0 pass | pass | pass 0.0.170427
predictnls 1.0.20-8 0 pass | pass | pass 0.No-Site
predictprotein 1.1.08-1 0 1.1.09
presto 0.7.2-2 0 neutral | pass | pass 0.7.4
prime-phylo 1.0.11-13 2 pass | pass | pass 0.No-Site
primer3 2.6.1-5 1 pass | pass | pass 2.6.1
prinseq-lite
0.20.4-7 (Git) action needed
0.20.4-6 0 pass | pass | pass 0.20.4
proalign 0.603-6 0 0.No-Release
probabel
0.5.0+dfsg-7 (Git) action needed
0.5.0+dfsg-6 1 pass | pass | pass 0.5.0
probalign 1.4-10 0 pass | pass | pass 1.4
probcons 1.12-14 0 pass | pass | pass 1.12
proda 1.0-14 0 pass | pass | pass 1.0
prodigal 1:2.6.3-6 0 pass | pass | pass 2.6.3
profbval 1.0.22-8 0 pass | pass | pass 0.No-Site
profisis 1.0.11-7 0 pass | pass | pass 0.No-Site
profnet 1.0.22-8 0 pass | pass | pass 0.No-Site
profphd 1.0.42-3 0 fail | fail 1.0.42
profphd-utils 1.0.10-7 0 pass | pass | pass 0.No-Site
proftmb 1.1.12-11 0 pass | pass | pass 0.No-Site
progressivemauve 1.2.0+4713+dfsg-5 0 pass | pass | pass 0.No-Release
prokka 1.14.6+dfsg-6 0 pass | pass | pass 1.14.6
propka 3.5.1-2 0 pass | pass | pass 3.5.1
proteinortho 6.3.1+dfsg-1 1 pass | pass | pass
prottest 3.4.2+dfsg-8 0 pass | pass | pass 3.4.2
provean 1.1.5+ds-5 0 pass | pass 1.1.5
pscan-chip 1.1-3 0 0.No-Release
pscan-tfbs 1.2.2-4 0 pass | pass | pass 0.No-Release
psignifit 2.5.6-8 0 pass | pass | pass 2.5.6
psortb 3.0.6+dfsg-4 2 pass | pass | pass
psychopy
2024.2.4+dfsg-1 (Git) action needed
2023.2.4+dfsg-4 7 (3 RC) pass | pass | fail 2025.1.1
pullseq 1.0.2-5 0 pass | pass | pass
pvclust 2.0-0-1 0
pvrg-jpeg 1.2.1+dfsg1-9 0
pybel 0.15.5-1 0 neutral | neutral | neutral 0.15.5
pybigwig 0.3.23+dfsg-1 0 pass | pass | pass 0.3.24
pychopper 2.7.10-1 1 (1 RC) pass | pass | pass 2.7.10
pycoqc 2.5.2+dfsg-4 0 pass | pass | pass 2.5.2
pycorrfit 1.1.7+nopack-3 0 pass | pass | pass 1.1.7
pydicom 2.4.3-2 0 neutral | neutral | neutral 3.0.1
pyensembl 2.3.13-2 0 neutral | pass | pass 2.3.13
pyfastx 2.2.0-1 0 pass | pass | pass 2.2.0
pylibtiff
0.6.1-3 (Git) action needed
0.6.1-2 0 neutral | pass | pass 0.6.1
pymia
0.1.9-3 (Git) action needed
0.1.9-2.1 2 0.1.9
pynast 1.2.2-4 0 fail | fail 1.2.2
pynn
0.12.2-1 (Git) action needed
0.10.1-5 0 neutral | neutral | neutral 0.12.4
pynwb 2.8.2-2 0 neutral | neutral 3.0.0
pyode 1.2.0.dev15-5 0 pass | pass | pass 1.2.0.dev15
pyqi 0.3.2+dfsg-13 0 neutral | neutral | neutral 0.3.2
pyranges 0.0.111+ds-9 1 neutral | neutral | neutral 0.0.111
pyrle 0.0.33-4.1 1 neutral | neutral | neutral
pyscanfcs 0.3.6+ds-5 0 pass | pass | pass 0.3.6
pysurfer 0.11.2-1 1 (1 RC) pass | pass | fail 0.11.2
python-alignlib 0.1.1+dfsg-2 0 neutral | neutral | neutral 0.1.1
python-anndata
0.12.0~rc1-1 (Git) action needed
0.10.6-1 2 (1 RC) pass | pass | fail 0.11.4
python-array-api-compat 1.11.2-1 0 neutral | neutral 1.12
python-avro 1.12.0+dfsg-1 0 neutral | pass | pass 1.12.0
python-awkward 2.6.5-1 0 pass 2.8.3
python-bcbio-gff
0.7.1-2 (Git) action needed
0.7.1-2 0 pass | pass | pass 0.7.1
python-bd2k 1.14~alpha1.48-1 0 1.14~alpha1.48
python-bel-resources 0.0.3-4 0 neutral | neutral | neutral 0.0.3
python-bids-validator
1.14.6-1 (Git) action needed
1.14.6-1 0 pass | pass | pass 1.14.6
python-bioblend
1.2.0-2 (Git) action needed
1.2.0-2 0 pass | pass | pass 1.5.0
python-bioframe 0.4.1-2 0 pass | pass | pass 0.8.0
python-biom-format 2.1.16-1 1 pass | pass | pass 2.1.16
python-biomaj3 3.0.20-2 0
python-biopython 1.85+dfsg-4 1 pass | pass | pass 1.85
python-bioregistry 0.11.12-3 0 0.12.13
python-biotools 1.2.12-6 0 neutral | neutral | neutral 1.2.12
python-burrito 0.9.1-3 0 neutral | fail 0.9.1
python-bx 0.13.0-1 0 neutral | pass | pass 0.13.0
python-bz2file 0.98-3 0 neutral | neutral | neutral 0.98
python-casmoothing 0.2-1 0
python-cgecore 1.5.6+ds-2 0 neutral | neutral | neutral 2.0.1
python-cgelib 0.7.3-3 0 0.7.5
python-cigar 0.1.3-2 0 pass | pass | pass 0.1.3
python-ciso8601 2.3.2-1 0 pass | pass | pass 2.3.2
python-clips 1.0.7.348+clips-4 0 neutral | neutral 1.0.7.348
python-cobra 0.29.1-2 0 pass | pass | fail 0.29.1
python-cogent 2024.5.7a1+dfsg-3 2 (1 RC) pass | pass | fail 2025.5.8a5
python-colormap 1.3.0-1 0 neutral | pass | pass 1.3.0
python-colormath 3.0.0-4 1 neutral | neutral | neutral 3.0.0
python-cooler 0.10.3-1 0 pass | pass | pass 0.10.3
python-csb
1.2.5+dfsg-11 (Git) action needed
1.2.5+dfsg-10 1 pass | pass | pass 1.2.5
python-curies 0.9.0-1 0 pass | pass 0.10.19
python-cutadapt 4.7-2 0 pass | pass | pass 5.0
python-cykhash 2.0.0-3 0 2.0.0
python-datacache 1.4.1-2 0 pass | pass | pass 1.4.1
python-deeptools 3.5.6+dfsg-1 0 pass | pass | pass 3.5.6
python-deeptoolsintervals 0.1.9-3 0 pass | pass | pass 0.1.9
python-dendropy 4.6.1-2 0 pass | pass | pass 5.0.1
python-depinfo 2.2.0-3 0 neutral | pass | pass 2.2.0rc3
python-dicompylercore 0.5.6-3 0 neutral | neutral | neutral 0.5.6
python-dictobj 0.4-7 0 neutral | neutral | neutral 0.4
python-dnaio 1.2.3-1 0 pass | pass | pass 1.2.3
python-duckpy
3.2.0-4 (Git) action needed
3.2.0-3 2 (1 RC) fail | pass | fail 3.2.0
python-easydev 0.13.3+dfsg1-1 0 neutral | pass | pass 0.13.3
python-epimodels
0.4.0-4 (Git) action needed
0.4.0-4 0 pass | pass | pass 0.4.3
python-ete3
3.1.3+dfsg-3 (Git) action needed
3.1.3+dfsg-3 0 neutral | neutral | neutral 3.1.3
python-etelemetry 0.3.1-1 0 fail | fail | fail 0.3.1
python-fitbit 0.3.1-5 0 neutral | neutral | neutral 0.3.1
python-freecontact
1.1-10 (Git) action needed
1.1-10 0 neutral | neutral | neutral 0.No-Site
python-geneimpacts 0.3.7-5 0 pass | pass | pass 0.3.7
python-gffutils 0.13-2 0 pass | pass | pass 0.13
python-gtfparse
2.0.1+ds-1 (Git) action needed
1.3.0+ds-2 0 pass | pass | pass 2.5.0
python-hdmedians 0.14.2-6 1 pass | pass | pass 0.14.2
python-hl7 0.4.5-3 0 neutral | neutral | neutral 0.4.5
python-hmmlearn 0.3.2-2 0 pass | pass 0.3.3
python-intervaltree-bio
1.0.1-4 (Git) action needed
1.0.1-4 0 pass | pass | pass 1.0.1
python-iow 1.0.7-1 0 pass | pass 1.0.8
python-leidenalg 0.10.2-3 0 pass | pass | pass 0.10.2
python-loompy 3.0.7+dfsg-4 1 pass | pass | pass 3.0.8
python-lzstring 1.0.4-3 0 neutral | neutral | neutral 1.0.4
python-matplotlib-venn 1.1.1-1 0 neutral | neutral | neutral 1.1.2
python-mne 1.9.0-2 2 neutral | neutral | neutral 1.9.0
python-multipletau 0.4.1+ds-1 0 pass | pass | pass 0.4.1
python-multisplitby 0.0.1-6 0 pass | pass | pass 0.0.1
python-mypy-extensions 1.0.0-1 0 neutral | neutral | neutral 1.1.0
python-nanoget 1.19.3-1 0 pass | pass | pass 1.19.3
python-nanomath
1.2.1+ds-1 (Git) action needed
1.2.1+ds-1 0 pass | pass | pass 1.4.0
python-ncls 0.0.63-hotfix+ds-1 1 pass | pass | pass 0.0.63-hotfix
python-pairix
0.3.8-2 (Git) action needed
0.3.8-1 0 pass | pass | pass 0.3.9
python-pangolearn 2022-07-09+dfsg-2 0 neutral | neutral | neutral 2022-07-09
python-parasail 1.3.3-1 0 pass | pass | pass 1.3.3
python-pauvre 0.2.3-4 0 pass | pass | pass 0.2.3
python-pbcommand 2.1.1+git20231020.28d1635-1 0 pass | pass | pass 2.1.1+git20231020.28d1635
python-pbconsensuscore 1.0.1-1~bpo8+1 0
python-pbcore 2.1.2+dfsg-11 1 pass | pass | pass 2.1.2
python-pbh5tools 0.8.0+dfsg-3~bpo8+1 0
python-pipdeptree
2.2.0-4 (Git) action needed
2.2.0-3 0 pass | pass | pass 2.26.1
python-prefixed 0.7.0-1 0 neutral | neutral | neutral 0.9.0
python-py2bit 0.3.3-1 0 pass | pass | pass 0.3.3
python-pyani
0.2.13.1-1 (Git) action needed
0.2.13-1 0 pass | pass | pass 0.2.13.1
python-pybedtools 0.10.0-4 0 neutral | pass | pass 0.12.0
python-pycosat 0.6.6+dfsg-2 0 pass | pass | pass 0.6.6
python-pyfaidx 0.8.1.3-2 0 pass | pass | pass 0.8.1.4
python-pyflow 1.1.20-4 0 neutral | neutral | fail 1.1.20
python-pymummer 0.11.0-5 0 pass | pass | pass 0.12.0
python-pynast 1.1-3 0
python-pynndescent 0.5.11-1 4 (1 RC) pass | pass | fail 0.5.13
python-pypubsub 4.0.3-7 0 neutral | neutral | neutral 4.0.3
python-pysam 0.23.0+ds-1 0 pass | pass | pass 0.23.0
python-pyspoa 0.2.1-2 0 pass | pass | pass 0.2.1
python-pyvcf 0.6.8+git20170215.476169c-11 0 pass | pass | pass 0.6.8+git20170215.476169c
python-qcli 0.1.1-3 0 neutral | fail 0.1.1
python-questplus 2023.1-3 0 pass | pass | pass 2023.1
python-rdflib-jsonld 0.6.1-2 0 neutral | neutral | neutral 0.6.2
python-ruffus 2.8.4-7 0 pass | pass | pass 2.8.4
python-schema-salad 8.9.20250408123006-1 2 pass | neutral | neutral 8.9.20250408123006
python-scitrack 2024.10.8-1 0 pass | pass | pass 2024.10.8
python-screed 1.1.3-1 0 pass | pass | pass 1.1.3
python-seqcluster
1.2.9+ds-5 (Git) action needed
1.2.9+ds-5 1 1.2.9
python-sinfo 1.0.0-1 0 pass | pass | pass
python-skbio 0.6.2-4 0 pass | pass | pass 0.6.3
python-spectra 0.1.0-1 0 pass | pass | pass 0.1.0
python-sqlsoup 0.9.1-5 0 neutral | neutral | fail 0.9.1
python-sqt 0.8.0-9 0 neutral | pass | pass 0.8.0
python-stdlib-list 0.11.1-1 0 neutral | pass | pass 0.11.1
python-streamz 0.6.4-2 2 pass | pass | pass 0.6.4
python-stubserver 1.1-4 0 pass | pass | pass 1.1
python-tinyalign 0.2.2-1 0 pass | pass | pass 0.2.2
python-treetime 0.11.4-1 0 pass | pass | pass 0.11.4
python-trx-python 0.3-1 0 pass | pass 0.3
python-typechecks 0.1.0+ds-4 0 neutral | neutral | neutral 0.1.0
python-upsetplot 0.9.0-3 0 pass | pass | pass 0.9.0
python-wdlparse 0.1.0-3 0 pass | pass | pass 0.1.0
python-wordcloud
1.9.3+dfsg-2 (Git) action needed
1.9.3+dfsg-2 1 pass | pass | pass 1.9.4
python-xopen 1.7.0-3 0 pass | pass | pass 2.0.2
python3-fitbitscraper 0.1-1 0
python3-typed-ast 1.5.4-1 0 neutral | neutral | neutral 1.5.5
pythonqt 3.0-3 0 3.2
pyxid 1.0-6 0 neutral | neutral | neutral 1.0
pyxnat
1.6.3-1 (Git) action needed
1.6.3-1 0 neutral | neutral | neutral 1.6.3
q2-alignment
2024.5.0-1 (Git) action needed
2024.5.0-1 1 (1 RC) pass | fail | fail 2025.4.0
q2-cutadapt
2024.5.0-2 (Git) action needed
2024.5.0-1 1 pass | fail | fail 2025.4.0
q2-dada2 2024.5.0-1 0 pass | fail | fail 2025.4.0
q2-demux
2024.5.0+dfsg-1 (Git) action needed
2024.5.0+dfsg-1 1 (1 RC) pass | fail | fail 2025.4.0
q2-diversity-lib 2024.5.0-1 0 pass | fail | fail 2025.4.0
q2-emperor 2024.5.0-2 0 pass | pass | pass 2025.4.0
q2-feature-classifier
2024.5.0-1 (Git) action needed
2024.2.0-1 1 (1 RC) pass | pass | fail 2025.4.0
q2-feature-table 2024.5.0+dfsg-1 0 fail | fail | fail 2025.4.0
q2-fragment-insertion 2024.5.0-1 0 pass | fail | fail 2025.4.0
q2-metadata 2024.5.0+dfsg-1 0 pass | pass | pass 2025.4.0
q2-phylogeny
2024.5.0-1 (Git) action needed
2024.5.0-1 1 (1 RC) fail | fail | fail 2025.4.0
q2-quality-control 2024.5.0-1 1 pass | fail | fail 2025.4.0
q2-quality-filter 2024.5.0-1 0 pass | fail | fail 2025.4.0
q2-sample-classifier 2024.5.0-2 0 pass | fail | fail 2025.4.0
q2-taxa 2024.5.0+dfsg-1 0 pass | pass | pass 2025.4.0
q2-types
2024.5.0-1 (Git) action needed
2024.5.0-1 3 (1 RC) pass | fail | fail 2025.4.0
q2cli 2024.5.0-2 1 (1 RC) pass | fail | neutral 2025.4.0
q2templates 2024.5.0+ds-3 1 pass | pass | pass 2025.4.0
qcat 1.1.0-7 1 pass | pass | pass 1.1.0
qcumber
2.3.0-3 (Git) action needed
2.3.0-2 6
qiime
2024.10.1-1 (Git) action needed
2024.5.0-1 2 fail | fail | fail 2025.4.0
qrisk2 0.1.20150729-7 1 pass | pass | pass 0.No-Track
qsopt-ex 2.5.10.3-3 0 2.5.10.3
qtl 1.23-16-1 0
qtltools 1.3.1+dfsg-4 0 pass | pass | pass 1.3.1
quicktree 2.5-6 0 pass | pass | pass 2.5
quitcount 3.1.4-4 0 3.1.4
quorum 1.1.2-2 0 pass | pass | pass 1.1.2
r-bioc-affy 1.84.0-2 0 pass | pass | pass 1.86.0
r-bioc-affyio 1.76.0-2 0 pass | pass | pass 1.78.0
r-bioc-altcdfenvs 1:2.68.0-2 0 pass | pass | pass 2.70.0
r-bioc-annotate 1.84.0+dfsg-2 0 pass | pass | pass 1.86.0
r-bioc-annotationdbi 1.68.0-2 0 pass | pass | pass 1.70.0
r-bioc-annotationfilter 1.30.0+dfsg-2 0 pass | pass | pass 1.32.0
r-bioc-annotationhub 3.14.0+dfsg-2 0 fail | pass | pass 3.16.0
r-bioc-aroma.light 3.36.0-2 0 pass | pass | pass 3.38.0
r-bioc-biobase 2.66.0-2 0 fail | pass | pass 2.68.0
r-bioc-biocgenerics 0.52.0-2 0 pass | pass | pass 0.54.0
r-bioc-biocinstaller 1.32.1-1 0 pass | fail
r-bioc-biocparallel 1.40.0-2 0 pass | pass | pass 1.42.0
r-bioc-biomart 2.62.1+dfsg-1 0 pass | pass | pass 2.64.0
r-bioc-biomformat 1.34.0+dfsg-2 0 pass | pass | pass 1.36.0
r-bioc-biostrings 2.74.1+dfsg-2 0 pass | pass | pass 2.76.0
r-bioc-biovizbase 1.54.0-2 0 pass | pass | pass 1.56.0
r-bioc-bsgenome 1.74.0-2 0 pass | pass | pass 1.76.0
r-bioc-cummerbund 2.48.0-2 0 pass | pass | pass 2.50.0
r-bioc-delayedarray 0.32.0+dfsg-2 0 pass | pass | pass 0.34.1
r-bioc-deseq2 1.46.0+dfsg-2 0 pass | pass | pass 1.48.1
r-bioc-dnacopy 1.80.0-2 0 pass | pass | pass 1.82.0
r-bioc-ebseq 2.4.0-2 0 pass | pass | pass 2.6.0
r-bioc-edger 4.4.2+dfsg-1 0 pass | pass | pass 4.6.2
r-bioc-ensembldb 2.30.0+dfsg-3 0 neutral | pass | pass 2.32.0
r-bioc-genefilter 1.88.0-2 0 pass | pass | pass 1.90.0
r-bioc-geneplotter
1.84.0+dfsg-2 (Git) action needed
1.84.0+dfsg-2 0 pass | pass | pass 1.86.0
r-bioc-genomeinfodb 1.42.3+dfsg-1 0 pass | pass | pass 1.44.0
r-bioc-genomeinfodbdata 1.2.13-2 0 pass | pass | pass 1.2.14
r-bioc-genomicalignments 1.42.0-2 0 pass | pass | pass 1.44.0
r-bioc-genomicfeatures 1.58.0+dfsg-2 0 fail | pass | pass 1.60.0
r-bioc-genomicranges 1.58.0+dfsg-2 0 pass | pass | pass 1.60.0
r-bioc-go.db 3.20.0-2 0 pass | pass | pass 3.21.0
r-bioc-graph 1.84.1-2 0 pass | pass | pass 1.86.0
r-bioc-gviz 1.50.0+dfsg-2 0 pass | pass | pass 1.52.0
r-bioc-hilbertvis 1.64.0-2 0 pass | pass | pass 1.66.1
r-bioc-hypergraph
1.78.0-2 (Git) action needed
1.78.0-2 0 pass | pass | pass 1.80.0
r-bioc-impute 1.80.0-2 0 pass | pass | pass 1.82.0
r-bioc-interactivedisplaybase 1.44.0+dfsg-2 0 pass | pass | pass 1.46.0
r-bioc-iranges
2.40.1-3 (Git) action needed
2.40.1-3 0 pass | pass | pass 2.42.0
r-bioc-limma 3.62.2+dfsg-1 0 pass | pass | pass 3.64.0
r-bioc-makecdfenv 1.82.0-2 0 pass | pass | pass 1.84.0
r-bioc-mergeomics 1.34.0-2 0 pass | pass | pass 1.36.0
r-bioc-metagenomeseq
1.48.1-1 (Git) action needed
1.48.1-1 0 pass | pass | pass 1.50.0
r-bioc-multtest 2.62.0-2 0 pass | pass | pass 2.64.0
r-bioc-pcamethods 1.98.0-2 0 pass | pass | pass 2.0.0
r-bioc-phyloseq 1.50.0+dfsg-2 0 pass | pass | pass 1.52.0
r-bioc-preprocesscore 1.68.0+ds-2 0 pass | pass | pass 1.70.0
r-bioc-protgenerics 1.38.0-2 0 pass | pass | pass 1.40.0
r-bioc-qvalue 2.38.0-2 0 pass | pass | pass 2.40.0
r-bioc-rbgl 1.82.0+dfsg-2 0 pass | pass | pass 1.84.0
r-bioc-rsamtools 2.22.0+dfsg-2 0 fail | pass | pass 2.24.0
r-bioc-rtracklayer 1.66.0-3 0 fail | pass | pass 1.68.0
r-bioc-s4vectors 0.44.0+dfsg-2 0 pass | pass | pass 0.46.0
r-bioc-savr 1.37.0-6 0 pass | pass | pass 0.No-Track
r-bioc-shortread 1.64.0-3 0 pass | pass | pass 1.66.0
r-bioc-snpstats 1.56.0+dfsg-2 0 pass | pass | pass 1.58.0
r-bioc-summarizedexperiment 1.36.0+dfsg-2 0 pass | pass | pass 1.38.1
r-bioc-variantannotation 1.52.0-2 0 pass | pass | pass 1.54.1
r-bioc-xvector 0.46.0-2 0 pass | pass | pass 0.48.0
r-cran-ade4 1.7-23-1 0 pass | pass | pass 1.7-23
r-cran-adegenet 2.1.11-1 0 pass | pass | pass 2.1.11
r-cran-adegraphics 1.0-21-1 0 pass | pass | pass 1.0-22
r-cran-adephylo 1.1-17-1 0 pass | pass | pass 1.1-17
r-cran-animation
2.7+dfsg-2 (Git) action needed
2.7+dfsg-1 0 pass | pass | pass 2.7
r-cran-ape 5.8-1-1 0 pass | pass | pass 5.8-1
r-cran-aplpack 1.3.5-1 0 pass | pass | pass 1.3.5
r-cran-assertthat 0.2.1-2 1 pass | pass | pass 0.2.1
r-cran-backports 1.5.0-2 0 pass | pass | pass 1.5.0
r-cran-batchjobs
1.9-2 (Git) action needed
1.9-1 0 pass | pass | pass 1.9
r-cran-bbmisc 1.13-1 0 fail | pass | pass 1.13
r-cran-bbmle 1.0.25.1-1 1 pass | pass | pass 1.0.25.1
r-cran-beeswarm
0.4.0-2 (Git) action needed
0.4.0-1 0 pass | pass | pass 0.4.0
r-cran-biasedurn 2.0.12-1 0 pass | pass | pass 2.0.12
r-cran-bigmemory 4.6.4-2 0 pass | fail | pass 4.6.4
r-cran-bigmemory.sri
0.1.8-1 (Git) action needed
0.1.8-1 0 pass | pass | pass 0.1.8
r-cran-bindr 0.1.2-1 0 pass | pass | pass 0.1.2
r-cran-bindrcpp 0.2.3-1 0 pass | pass | pass 0.2.3
r-cran-bio3d 2.4-5-1 0 pass | fail | pass 2.4-5
r-cran-bit 4.6.0+dfsg-1 0 fail | pass | pass 4.6.0
r-cran-bit64 4.6.0-1-4 0 pass | pass | pass 4.6.0-1
r-cran-bitops 1.0-9-1 0 pass | pass | pass 1.0-9
r-cran-blob 1.2.4-1 0 pass | pass | pass 1.2.4
r-cran-blockmodeling 1.1.5-1 0 pass | pass | pass 1.1.5
r-cran-bold 1.3.0-1 1 pass | fail | fail
r-cran-boolnet 2.1.9-1 0 pass | pass | pass 2.1.9
r-cran-brew 1.0-10-1 0 pass | pass | pass 1.0-10
r-cran-cairo 1.6-2-1 0 pass | pass | pass 1.6-2
r-cran-calibrate 1.7.7-1 0 pass | pass | pass 1.7.7
r-cran-catools 1.18.3-1 0 pass | pass | pass 1.18.3
r-cran-checkmate 2.3.2-1 0 fail | pass | pass 2.3.2
r-cran-clustergeneration 1.3.8-1 0 pass | pass | pass 1.3.8
r-cran-cmprsk 2.2-12-1 0 pass | pass | pass 2.2-12
r-cran-combinat 0.0-8-7 0 pass | pass | pass 0.0-8
r-cran-crayon 1.5.3-1 0 pass | pass | pass 1.5.3
r-cran-crul 1.5.0+dfsg-1 0 pass | pass | pass 1.5.0
r-cran-curl
6.2.1+dfsg-2 (Git) action needed
6.2.1+dfsg-1 1 pass | pass | pass 6.2.2
r-cran-data.table 1.17.0+dfsg-1 0 pass | pass | pass 1.17.2
r-cran-dbitest 1.8.2-1 0 pass | pass | pass 1.8.2
r-cran-deal
1:1.2-42-2 (Git) action needed
1:1.2-42-1 0 pass | pass | pass 1.2-42
r-cran-desc 1.4.3-1 0 pass | pass | pass 1.4.3
r-cran-diagnosismed 0.2.3-7 1 pass | pass | pass 0.2.3
r-cran-dichromat 1:2.0-0.1-1 0 pass | pass | pass 2.0-0.1
r-cran-distory 1.4.5-1 0 pass | pass | pass 1.4.5
r-cran-doparallel
1.0.17-2 (Git) action needed
1.0.17-1 0 pass | pass | pass 1.0.17
r-cran-dorng 1.8.6.1-1 0 pass | pass | pass 1.8.6.2
r-cran-dosefinding 1.3-1-1 0 pass | pass | pass 1.3-1
r-cran-dplyr 1.1.4-4 1 fail | pass | pass 1.1.4
r-cran-ellipse 0.5.0-1 0 pass | pass | pass 0.5.0
r-cran-epi 2.59-1 0 pass | pass | pass 2.59
r-cran-epibasix 1.5-2 0 pass | pass | pass 1.5
r-cran-epicalc 2.15.1.0-5 1 pass | pass | pass 2.15.1.0
r-cran-epir 2.0.80+dfsg-1 0 pass | pass | pass 2.0.83
r-cran-epitools 1:0.5-10.1-2 0 pass | pass | pass 0.5-10.1
r-cran-etm 1.1.1-1 0 pass | pass | pass 1.1.2
r-cran-evaluate 1.0.3-1 0 pass | pass | pass 1.0.3
r-cran-evd 2.3-7.1-1 0 pass | pass | pass 2.3-7.1
r-cran-factominer 2.11-1 0 pass | pass | pass 2.11
r-cran-fail 1.3-4 0 pass | pass | pass 1.3
r-cran-fastcluster 1.3.0-1 0 pass | pass | pass 1.3.0
r-cran-fastmatch 1.1-6-1 0 pass | pass | pass 1.1-6
r-cran-fauxpas 0.5.2+dfsg-1 0 pass | pass | pass 0.5.2
r-cran-fields 16.3.1-1 0 pass | pass | pass 16.3.1
r-cran-filehash 2.4-6-1 0 pass | pass | fail 2.4-6
r-cran-fitbitscraper
0.1.8-6 (Git) action needed
0.1.8-6 0 pass | pass | pass 0.1.8
r-cran-fitcoach
1.0-4 (Git) action needed
1.0-4 0 pass | pass | pass 1.0
r-cran-flashclust 1.01-2-3 0 pass | pass | pass 1.01-2
r-cran-futile.logger 1.4.3-4 0 pass | pass | pass 1.4.3
r-cran-futile.options 1.0.1-3 0 pass | pass | pass 1.0.1
r-cran-future 1.34.0+dfsg-1 0 fail | pass | pass 1.49.0
r-cran-g.data 2.4.1-1 0 pass | pass | pass 2.4.1
r-cran-gee 4.13-29-1 0 pass | pass | pass 4.13-29
r-cran-genabel 1.8-0-6 1 (1 RC) pass | pass | pass 1.8-0
r-cran-genabel.data 1.0.0-4 1 pass | pass | pass
r-cran-genetics
1.3.8.1.3-2 (Git) action needed
1.3.8.1.3-1 0 pass | pass | pass 1.3.8.1.3
r-cran-ggplot2
3.5.1+dfsg-2 (Git) action needed
3.5.1+dfsg-1 0 pass | pass | pass 3.5.2
r-cran-ggsci 3.2.0-1 0 pass | pass | pass 3.2.0
r-cran-globals 0.16.3-1 0 pass | pass | pass 0.18.0
r-cran-glue 1.8.0-1 0 fail | pass | pass 1.8.0
r-cran-googlevis 0.7.3+dfsg-1 0 pass | pass | pass 0.7.3
r-cran-gridbase 0.4-7-5 0 pass | pass | pass 0.4-7
r-cran-gtable 0.3.6+dfsg-1 0 pass | pass | pass 0.3.6
r-cran-guerry 1.8.3-1 0 pass | pass | pass 1.8.3
r-cran-haplo.stats 1.9.7-1 0 pass | pass | pass 1.9.7
r-cran-hexbin 1.28.5-1 0 pass | pass | pass 1.28.5
r-cran-hms 1.1.3-1 0 pass | pass | pass 1.1.3
r-cran-htmltools 0.5.8.1-1 0 pass | pass | pass 0.5.8.1
r-cran-htmlwidgets 1.6.4+dfsg-1 0 pass | pass | pass 1.6.4
r-cran-httpcode 0.3.0-2 0 pass | pass | pass 0.3.0
r-cran-httr 1.4.7+dfsg-1 0 pass | pass | pass 1.4.7
r-cran-hwriter
1.3.2.1-2 (Git) action needed
1.3.2.1-1 0 pass | pass | pass 1.3.2.1
r-cran-igraph 2.1.4-1 1 pass | pass | pass 2.1.4
r-cran-irlba 2.3.5.1-4 0 pass | pass | pass 2.3.5.1
r-cran-labeling 0.4.3-1 0 pass | pass | pass 0.4.3
r-cran-lambda.r 1.2.4-2 0 pass | pass | pass 1.2.4
r-cran-lazyeval
0.2.2-2 (Git) action needed
0.2.2-1 0 pass | pass | pass 0.2.2
r-cran-lexrankr 0.5.2-8 0 pass | pass | pass 0.5.2
r-cran-listenv 0.9.1+dfsg-1 0 pass | pass | pass 0.9.1
r-cran-luminescence 1.0.1-1 0 pass | pass | pass 1.0.1
r-cran-magic 1.6-1-1 0 pass | pass | pass 1.6-1
r-cran-magrittr 2.0.3-1 0 pass | pass | pass 2.0.3
r-cran-matrixstats 1.5.0-1 0 fail | pass | pass 1.5.0
r-cran-medadherence 1.03-6 1 pass | pass | pass 1.03
r-cran-memoise 2.0.1-1 0 pass | pass | pass 2.0.1
r-cran-minpack.lm 1.2-4-1 0 pass | pass | pass 1.2-4
r-cran-mockery 0.4.4+dfsg-1 0 pass | pass | pass 0.4.4
r-cran-mockr 0.2.1-1 1 (1 RC) pass | fail | pass 0.2.2
r-cran-munsell
0.5.1-2 (Git) action needed
0.5.1-1 0 pass | pass | pass 0.5.1
r-cran-natserv 1.0.0+dfsg-1 0 pass | pass | pass 1.0.0
r-cran-nmf 0.28-1 0 pass | fail | pass 0.28
r-cran-nnls 1.6-1 0 pass | pass | pass 1.6
r-cran-openssl 2.3.2+dfsg-1 1 pass | pass | pass 2.3.2
r-cran-optparse 1.7.5-1 0 pass | pass | pass 1.7.5
r-cran-permute
0.9-7-2 (Git) action needed
0.9-7-1 0 pass | pass | pass 0.9-7
r-cran-phangorn 2.12.1+dfsg-1 0 pass | pass | pass 2.12.1
r-cran-pheatmap
1.0.12-2 (Git) action needed
1.0.12-2 0 pass | pass | pass 1.0.12
r-cran-phylobase 0.8.12-1 0 pass | pass | pass 0.8.12
r-cran-phytools 2.4-4-1 0 pass | pass | pass 2.4-4
r-cran-pkgconfig 2.0.3-2 0 pass | pass | pass 2.0.3
r-cran-pkgmaker 0.32.10-1 0 pass | pass | pass
r-cran-plogr 0.2.0-3 0 pass | pass | pass 0.2.0
r-cran-plyr
1.8.9-2 (Git) action needed
1.8.9-1 0 pass | pass | pass 1.8.9
r-cran-png 0.1-8-1 0 pass | pass | pass 0.1-8
r-cran-praise 1.0.0-4 0 pass | pass | pass 1.0.0
r-cran-prettyr
2.2-3-2 (Git) action needed
2.2-3-2 0 pass | pass | pass 2.2-3
r-cran-prettyunits 1.2.0-1 0 pass | pass | pass 1.2.0
r-cran-princurve 2.1.6-1 0 pass | pass | pass 2.1.6
r-cran-progress 1.2.3-1 0 pass | pass | pass 1.2.3
r-cran-proto 1.0.0-3 0 pass | pass | pass 1.0.0
r-cran-pscbs 0.67.0-3 0 pass | pass | pass 0.68.0
r-cran-psy
1.2-2 (Git) action needed
1.2-1 0 pass | pass | pass 1.2
r-cran-purrr 1.0.4-1 0 pass | pass | pass 1.0.4
r-cran-pvclust 2.2-0-2 1 pass | pass | pass 2.2-0
r-cran-qqman 0.1.9+dfsg-1 0 pass | pass | pass 0.1.9
r-cran-qtl 1.70-1 0 pass | pass | pass 1.70
r-cran-qvalue 1.20.0-1 0
r-cran-r.cache 0.16.0-1 0 pass | pass | pass 0.17.0
r-cran-r.methodss3
1.8.2-2 (Git) action needed
1.8.2-1 0 pass | pass | pass 1.8.2
r-cran-r.oo 1.27.0-1 0 pass | pass | pass 1.27.1
r-cran-r.utils 2.13.0-1 0 pass | pass | pass 2.13.0
r-cran-randomforest 4.7-1.2-1 0 pass | pass | pass 4.7-1.2
r-cran-raster 3.6-31-1 0 fail | fail | pass 3.6-32
r-cran-rcurl 1.98-1.16+dfsg-1 1 pass | pass | pass 1.98-1.17
r-cran-registry 0.5-1-2 0 pass | pass | pass 0.5-1
r-cran-rentrez 1.2.3+dfsg-1 0 pass | pass | pass 1.2.3
r-cran-reshape
0.8.9-2 (Git) action needed
0.8.9-1 0 pass | pass | pass 0.8.9
r-cran-reshape2 1.4.4-2 0 pass | pass | pass 1.4.4
r-cran-rglwidget 0.2.1-4 1 pass | pass | pass
r-cran-rhandsontable 0.3.8+dfsg-1 0 pass | pass | pass 0.3.8
r-cran-ritis 1.0.0-1 0 pass | pass | pass 1.0.0
r-cran-rlang 1.1.5-3 0 pass | pass | pass 1.1.6
r-cran-rlumshiny 0.2.3-1 0 pass | pass | pass 0.2.4
r-cran-rmarkdown 2.29+dfsg-1 1 pass | pass | pass 2.29
r-cran-rncl 0.8.7-1 0 pass | pass | pass 0.8.7
r-cran-rnexml 2.4.11+ds-1 0 pass | pass | pass 2.4.11
r-cran-rngtools
1.5.2-2 (Git) action needed
1.5.2-1 0 pass | pass | pass 1.5.2
r-cran-rniftilib 0.0-35.r79-6 0 pass | pass | pass 0.No-Site
r-cran-rocr 1.0-11-3 0 pass | pass | pass 1.0-11
r-cran-rotl 3.1.0-1 0 pass | pass | pass 3.1.0
r-cran-rprojroot 2.0.4-2 0 pass | pass | pass 2.0.4
r-cran-rredlist 1.0.0-1 0 pass | pass | pass 1.0.0
r-cran-rsolnp 1.16+dfsg-4 0 pass | pass | pass 1.16
r-cran-rsqlite 2.3.9-1 0 pass | pass | pass 2.3.11
r-cran-rwave 2.6-5-1 0 pass | pass | pass 2.6-5
r-cran-samr 3.0-2 0 pass | pass | pass 3.0
r-cran-scales
1.3.0-2 (Git) action needed
1.3.0-1 0 pass | pass | pass 1.4.0
r-cran-scatterd3 1.0.1+dfsg-1 0 pass | pass | pass 1.0.1
r-cran-segmented 2.1-4-1 0 pass | pass | pass 2.1-4
r-cran-sendmailr 1.4-0-1 0 pass | pass | pass 1.4-0
r-cran-seqinr 4.2-36-1 0 pass | pass | pass 4.2-36
r-cran-seroincidence 2.0.0-3 2 pass | pass | pass 2.0.0
r-cran-shape 1.4.6.1-1 0 pass | pass | pass 1.4.6.1
r-cran-shiny 1.10.0+dfsg-2 1 pass | pass | pass 1.10.0
r-cran-shinybs 0.61.1-1 0 pass | pass | pass 0.61.1
r-cran-shinydashboard 0.7.2-1 0 pass | pass | pass 0.7.3
r-cran-snowballc 0.7.1-1 0 pass | pass | pass 0.7.1
r-cran-snowfall 1.84-6.3-1 0 pass | pass | pass 1.84-6.3
r-cran-solrium 1.2.0+dfsg-1 0 pass | pass | pass 1.2.0
r-cran-sourcetools 0.1.7-1-1 0 pass | pass | pass 0.1.7-1
r-cran-stringi 1.8.4-1 0 pass | pass | pass 1.8.7
r-cran-stringr 1.5.1-1 0 pass | pass | pass 1.5.1
r-cran-surveillance 1.24.1-1 0 pass | pass | pass 1.24.1
r-cran-taxize 0.10.0-1 0 pass | pass | pass 0.10.0
r-cran-testit
0.13-2 (Git) action needed
0.13-1 0 pass | pass | pass 0.13
r-cran-testthat 3.2.3-1 0 pass | pass | pass 3.2.3
r-cran-tibble 3.2.1+dfsg-3 0 fail | pass | pass 3.2.1
r-cran-tidyr 1.3.1-1 0 pass | pass | pass 1.3.1
r-cran-tidyselect 1.2.1+dfsg-1 0 pass | pass | pass 1.2.1
r-cran-tikzdevice 0.12.6-1 0 pass | pass | pass 0.12.6
r-cran-treescape 1.10.18+dfsg-2 0 pass | pass | fail 1.10.18
r-cran-treespace 1.1.4.3+dfsg-1 0 pass | pass | pass 1.1.4.3
r-cran-triebeard 0.4.1-1 0 pass | pass | pass 0.4.1
r-cran-truncnorm 1.0-9-2 0 pass | pass | pass 1.0-9
r-cran-urltools 1.7.3+dfsg-2 0 pass | pass | pass 1.7.3
r-cran-vegan
2.6-10+dfsg-3 (Git) action needed
2.6-10+dfsg-3 0 pass | pass | pass 2.6-10
r-cran-vioplot 0.5.1-1 0 pass | pass | pass 0.5.1
r-cran-waveslim 1.8.5-1 0 pass | pass | pass 1.8.5
r-cran-wavethresh 4.7.3-1 0 pass | pass | pass 4.7.3
r-cran-webmockr 2.0.0-1 0 pass | pass | pass 2.0.0
r-cran-webutils 1.2.2-1 0 pass | pass | pass 1.2.2
r-cran-wikidatar
2.3.3-2 (Git) action needed
2.3.3-1 0 pass | pass | pass 2.3.3
r-cran-wikipedir 1.7.1-1 0 pass | pass | pass 1.7.1
r-cran-wikitaxa 0.4.0+dfsg-1 0 pass | pass | pass 0.4.0
r-cran-withr 3.0.2+dfsg-1 0 pass | pass | pass 3.0.2
r-cran-worrms 0.4.3+dfsg-1 0 pass | pass | pass 0.4.3
r-cran-xml2 1.3.8-1 0 pass | pass | pass 1.3.8
r-other-bio3d 1.1-5-1 0
r-other-hms-dbmi-spp 1.15.2-1 0 1.15.2
r-other-mott-happy 2.4-5 0 pass | pass | pass 0.No-Site
raccoon 1.0b-1 0 1.0b
racon 1.5.0-3 1 pass | pass | pass 1.5.0
radiant 2.8.1+dfsg-2 0 pass | pass | pass 2.8.1
ragout 2.3-5 0 pass | pass | pass 2.3
rambo-k
1.21+dfsg-6 (Git) action needed
1.21+dfsg-5 1
rampler 2.1.1-1 0 pass | pass | pass 2.1.1
rapmap 0.15.0+dfsg-4 3 pass | pass | pass 0.15.0
raster3d 3.0-7-2 2 pass | pass | pass 3.0-8
rate4site 3.0.0-8 0 pass | pass | pass 0.No-Site
raxml 8.2.13+dfsg-2 1 pass | pass | pass 8.2.13
ray 2.3.1-9 0 pass | pass | pass 2.3.1
rdp-alignment
1.2.0-9 (Git) action needed
1.2.0-8 0 1.2.0
rdp-classifier 2.10.2-7 1 (1 RC) 2.10.2
rdp-readseq
2.0.2-10 (Git) action needed
2.0.2-9 0 pass | pass | pass 2.0.2
readerwriterqueue 1.0.6-1 0 1.0.7
readseq 1-15 1 pass | pass | pass 0.No-Release
readucks 0.0.3-6 0 pass | pass | pass 0.0.3
reapr 1.0.18+dfsg-7 0 pass | pass | pass 1.0.18
recan 0.5+dfsg-1 0 pass | pass | pass 0.5
relacy 0.0+git20191025.acc09bb-2 0 0.0+git20250422.f1cee3b
relion 3.1.3-4 1 neutral | neutral | neutral 5.0.0
relion-cuda
(Git) action needed
3.1.3-2 2 (2 RC) neutral | neutral | fail 5.0.0
repeatmasker-recon 1.08-8 0 pass | pass | pass
reprof 1.0.1-9 0 pass | pass | pass 0.No-Site
resfinder 4.4.2-2 0 pass | pass | pass 4.7.2
resfinder-db 0.0+git20220524.fa32d9a-1 1 0.0+git20250515.cf9bbc7
rna-star 2.7.11b+dfsg-2 0 pass | pass | pass 2.7.11b
rnahybrid 2.1.2-8 0 pass | pass | pass 0.No-Track
roary 3.13.0+dfsg-2 0 pass | pass | pass 3.13.0
rockhopper 2.0.3+dfsg2-5 0 pass | pass | pass 2.0.3
roguenarok 1.0.1-3 1 pass | pass | pass 1.0.1
routine-update
0.2.4 (Git) action needed
0.2.3 6
rsem 1.3.3+dfsg-3 0 pass | pass | pass 1.3.3
rtax 0.984-8 0 0.984
ruby-rgfa 1.3.1+dfsg-3 0 pass | pass | pass 1.3.1
runcircos-gui 0.0+git20200528.82dda8c-1 0 0.0+git20200528.82dda8c
saint 2.5.0+dfsg-4 1 2.5.0
salmid 0.1.23-5 0 pass | pass | pass 0.1.23
salmon 1.10.2+ds1-1 3 pass | pass | pass 1.10.3
sambamba
1.0.1+dfsg-3 (Git) action needed
1.0.1+dfsg-2 2 pass | pass | pass 1.0.1
samblaster 0.1.26-4 0 pass | pass | pass 0.1.26
samclip 0.4.0-4 0 pass | pass | pass 0.4.0
samtools 1.21-1 0 pass | pass | pass 1.21
samtools-legacy 0.1.19+dfsg-6 0 pass | pass | pass 0.1.19
savvy 2.1.0-3 0 2.1.0
sbmltoolbox 4.1.0-5.1 0 4.1.0
scoary 1.6.16-10 0 pass | pass | pass 1.6.16
scrappie
1.4.2-8 (Git) action needed
1.4.2-8 0 pass | pass | pass 1.4.2
scrm 1.7.4-2 0 pass | pass | pass 1.7.4
scythe 0.994+git20141017.20d3cff-5 0 pass | pass | pass 0.994+git20141017.20d3cff
seaview 1:5.0.5-3 0 pass | pass | pass 5.1
seer 1.1.4-8 0 pass | pass | pass 1.1.4
segemehl 0.3.4-5 0 pass | pass | pass 0.3.4
seirsplus
1.1.0-1 (Git) action needed
1.0.9-2 1 pass | pass | pass 1.0.9
sepp 4.5.5+dfsg-1 0 pass | pass | pass 4.5.5
seq-gen
1.3.4-3 (Git) action needed
1.3.4-2 0 1.3.5
seqan 1.4.2+dfsg-3 0 1.4.2
seqan-needle 1.0.3+ds-1 0 pass | pass 1.0.3
seqan-raptor 3.0.1+ds-9 0 pass | pass 3.0.1
seqan2
2.4.0+dfsg-16 (Git) action needed
2.4.0+dfsg-16 2 pass | pass | pass 2.5.0
seqan3 3.4.0~rc.3+ds-4 1 pass | pass | pass 3.4.0~rc.3
seqkit 2.9.0+ds-1 0 pass | pass | pass 2.10.0
seqmagick 0.8.6-3 0 pass | pass | pass 0.8.6
seqprep 1.3.2-9 1 pass | pass | pass 1.3.2
seqsero 1.0.1+dfsg-6 0 pass | pass | pass 1.0.1
seqtk 1.4-2 0 pass | pass | pass 1.4
seqtools
4.44.1+dfsg-8 (Git) action needed
4.44.1+dfsg-7.1 2 pass | pass | pass 4.44.1
seriation 0.1+git20210125.fc7b8cb-1 0 pass | pass | pass 0.1+git20210125.fc7b8cb
setcover 0.0~git20161128.b1de791-2 0 0.0~git20161128.b1de791
sga 0.10.15-7 0 0.10.15
shapeit4 4.2.2+dfsg-1 0 pass | pass | pass 4.2.2
shasta
0.13.0-1 (Git) action needed
0.12.0-1 0 pass | pass | pass 0.14.0
shovill 1.1.0-9 0 pass | pass | pass 1.1.0
sibelia
3.0.7+dfsg-3 (Git) action needed
3.0.7+dfsg-3 0 pass | pass | pass 3.0.7
sibsim4 0.20-5 0 0.20
sickle 1.33+git20150314.f3d6ae3-2 0 pass | pass | pass 1.33+git20150314.f3d6ae3
sideretro
(Git) action needed
1.1.6-2 0 1.1.6
sift
6.2.1-1 (Git) action needed
6.2.1-1 3 6.2.1
sight 25.0.0-1 2 25.0.0
sigma-align 1.1.3-9 0 pass | pass | pass
sigviewer 0.6.4-3 0 0.6.4
sim4 0.0.20121010-8 1 pass | pass | pass 0.0.20121010
simde 0.8.2-3 0 pass | pass | pass 0.8.4~rc1
simka 1.5.3-8 0 pass | pass | pass 1.5.3
simpleitk 1.0.1-3 0
simrisc 16.02.00-1 1 pass | pass | pass
sitplus 1.0.3-5.1 0 1.0.3
ska 1.0+dfsg-4 0 pass | pass 1.0
skesa 2.4.0-6 0 2.4.0
skewer 0.2.2-6 0 pass | pass | pass 0.2.2
sleepyhead 1.0.0-beta-2+dfsg-6 0 1.0.0-beta-2
smalr 1.1+dfsg-2 0 pass | fail 1.1
smalt 0.7.6-13 0 pass | pass | pass 0.7.6
smart-open 7.1.0-1 0 pass | pass | pass 7.2.0
smrtanalysis 0~20210112 0
snakemake
8.2.3-1 (Git) action needed
7.32.4-7 2 pass | pass | pass 9.4.0
snap 2013-11-29-11 0 pass | pass | pass
snap-aligner
2.0.3+dfsg-3 (Git) action needed
2.0.3+dfsg-2 1 pass | pass | pass 2.0.5
snappy1.0.3-java 1.0.3-rc3~dfsg-4 0
sniffles 2.6.0-1 0 pass | pass | pass 2.6.2
snippy 4.6.0+dfsg-5 0 pass | pass 4.6.0
snp-sites 2.5.1-2 0 pass | pass | pass 2.5.1
snpeff 5.2.f+dfsg-1 0 pass | pass | pass 5.2.f
snpomatic 1.0-7 0 pass | pass | pass 1.0
snpsift 5.2.e+dfsg-2 0 pass | pass | pass 5.2.f
soapaligner 2.20-5 1 0.No-Site
soapdenovo 1.05-6 1 pass | pass | pass 0.No-Release
soapdenovo2 242+dfsg-4 2 pass | pass | pass 242
soapsnp
1.03-6 (Git) action needed
1.03-5 0 0.No-Site
socket++ 1.12.13+git20131030.5d039ba-1 0 1.12.13+git20131030.5d039ba
sofa-framework 1.0~beta4-12 0
solvate 1.0-3 0 pass | pass | pass 0.No-Site
sorted-nearest 0.0.39+dfsg-3 1 pass | pass | pass 0.0.39
sortmerna 4.3.7-2 2 pass | neutral | neutral 4.3.7
sourmash 4.8.14-3 0 pass | pass 4.9.0
spaced 1.2.0-201605+dfsg-4 0 pass | pass | pass 0.No-Release
spades 4.0.0+really3.15.5+dfsg-1 3 pass | pass | pass 4.2.0
spaln 3.0.2+dfsg-2 0 pass | pass | pass 3.0.6d
spdlog 1:1.15.2+ds-2 0 pass | pass | pass 1.15.3
sphinxcontrib-autoprogram 0.1.9-1 0 pass | pass | pass 0.1.9
spoa 4.1.4-2 1 pass | pass | pass 4.1.4
sprai 0.9.9.23+dfsg1-3 0 0.No-Site
spread-phy 1.0.7+dfsg-5 0
squizz 0.99d+dfsg-3 0 pass | fail | pass 0.99d
sra-sdk
3.2.1+dfsg-4 (Git) action needed
3.2.1+dfsg-4 0 pass | pass | pass 3.2.1
srf 0.1+dfsg-7 0 0.1
srst2 0.2.0-13 0 pass | pass | pass 0.2.0
ssake 4.0.1-2 0 pass | pass | pass 4.0.1
sspace 2.1.1+dfsg-7 0 pass | pass | pass 2.1.1
ssshtest 0.0+git20220105.0d6df3d-1 0 pass | pass | pass 0.0+git20231108.fd3155a
stacks
2.68+dfsg-3 (Git) action needed
2.68+dfsg-2 0 neutral | neutral 2.68
staden
2.0.0+b11-6 (Git) action needed
2.0.0+b11-5 1 2.0.0b11
staden-io-lib 1.15.0-1.1 0 pass | pass | pass 1.15.0
stringtie 2.2.1+ds-3 0 pass | pass | pass 3.0.0
subarch-select 0.2-1 0 pass | pass 0.2
subread 2.0.8+dfsg-1 0 pass | pass | pass 2.1.1
suitename 0.4.130509+git20210223.ebb1325-1 0 0.No-Release
sumaclust 1.0.36+ds-4 0 pass | pass | pass 1.0.36
sumalibs 1.0.36-5 0 pass | pass | pass 1.0.36
sumatra
1.0.36+ds-3 (Git) action needed
1.0.36+ds-2 0 pass | pass | pass 1.0.36
surankco 0.0.r5+dfsg-4 1 0.0.r5
surpyvor 0.5-2 0 0.5
survivor 1.0.7-4 0 pass | pass | pass 1.0.7
svim 2.0.0-3 0 pass | pass | pass 2.0.0
swarm-cluster
3.1.5+dfsg-3 (Git) action needed
3.1.5+dfsg-2 0 pass | pass | pass 3.1.5
sweed 3.2.1+dfsg-6 1 pass | pass | pass 3.2.1
swissknife
1.80-1 (Git) action needed
1.80-1 0 pass | pass | pass
t-coffee 13.45.0.4846264+really13.41.0.28bdc39+dfsg-1 1 pass | pass | pass
tabix 0.2.6-2 0
tantan 51-1 0 pass | pass | pass 51
tao-config 0.0+git20200604.84a7383-2 0 0.0+git20240413.93a455e
tao-json 1.0.0~beta14-1 1 (1 RC) 1.0.0~beta14
terraphast 0.0+git20200413.8af2e4c+dfsg-3 0 pass | pass 0.0+git20250513.85ab617
theseus 3.3.0-14 1 pass | pass | pass
thesias 3.1.1-3 1 3.1.1
tiddit 3.6.1+dfsg-2 0 pass | pass | pass 3.9.3
tifffile 20250330-1 0 pass | pass | pass 20250510
tigr-glimmer
3.02b-6 (Git) action needed
3.02b-6 0 pass | pass | pass 3.02b
tipp 1.0+dfsg-3 0 1.0
tm-align 20190822+dfsg-3 0 pass | pass | pass
tnseq-transit 3.3.12-1 1 pass | pass | pass 3.3.19
toil
8.2.0-1 (Git) action needed
8.0.0-5 0 pass | pass | pass 8.2.0
tombo 1.5.1-7 0 pass | pass | pass 1.5.1
toml11 4.4.0-1 0 pass | pass | pass 4.4.0
tophat 2.1.1+dfsg1-2 0 pass | pass 2.1.1
tophat-recondition
1.4-3 (Git) action needed
1.4-3 0 1.4
toppred 1.10-10 0 pass | pass | pass 1.10
tortoize 2.0.15-1 0 pass | pass | pass 2.0.15
trace2dbest
3.0.1-2 (Git) action needed
3.0.1-2 0
tracetuner 3.0.6~beta+dfsg-3 1 3.0.6~beta
transdecoder 5.7.1-2 0 pass | pass | pass 5.7.1
transrate-tools 1.0.0-5 0 pass | pass | pass 1.0.0
transtermhp 2.09-5 0 pass | pass | pass 2.09
tree-puzzle 5.3~rc16+dfsg-12 0 pass | pass | pass 5.2
treeview 1.2.0+dfsg-2 0 1.2.1
treeviewx 0.5.1+git20100823.7e4d0e9-4 1 0.5.1+git20100823.7e4d0e9
trf 4.09.1-6 0 pass | pass | pass 4.09.1
trim-galore 0.6.10-1 0 pass | pass | pass 0.6.10
trimmomatic 0.39+dfsg-2 0 pass | pass | pass 0.39
trinculo
0.96+dfsg-4 (Git) action needed
0.96+dfsg-4 1 pass | pass | pass 0.96
trinityrnaseq 2.15.2+dfsg-1 1 pass | pass | pass 2.15.2
trnascan-se 2.0.12+ds-1 0 pass | pass | pass
tvc 5.0.3+git20151221.80e144e+dfsg-5 0 pass | pass | pass 5.0.3+git20151221.80e144e
twopaco 1.0.0+dfsg-1 1 pass | pass | pass 1.1.0
uc-echo 1.12-19 1 pass | pass | pass 1.12
ugene
51.0+dfsg-4 (Git) action needed
51.0+dfsg-3 1 52.1
umap-learn 0.5.4+dfsg-1 3 (1 RC) pass | pass | fail 0.5.4
umis
1.0.9-2 (Git) action needed
1.0.9-2 1 (1 RC) pass | pass | pass 1.0.9
unanimity 3.3.0+dfsg-2.1 0 fail | fail 6.0.0
uncalled 2.3+ds-3 0 pass | pass | pass 2.3
unicycler
0.5.1+dfsg-3 (Git) action needed
0.5.1+dfsg-3 0 pass | pass | pass 0.5.1
unifrac 1.3-4 0 pass | pass | pass 1.5
unifrac-tools 1.4-3 1 neutral | neutral | neutral 1.5
unikmer 0.20.0-1 0 pass | pass | pass 0.20.0
varna 3-93+ds-7 0 pass | pass | pass 3-93
varscan 2.4.3+dfsg-4 0
vcfanno 0.3.5+ds-2 0 pass | pass | pass 0.3.5
vcftools 0.1.16-3 0 pass | pass | pass 0.1.17
vdjtools 1.2.1+git20190311+repack-2 0 pass | pass | pass 1.2.1
velvet 1.2.10+dfsg1-9 1 pass | pass | pass 1.2.10
velvetoptimiser
2.2.6-6 (Git) action needed
2.2.6-5 0 pass | pass | pass 2.2.6
veryfasttree 4.0.4+dfsg-2 0 pass | pass 4.0.5
vg
1.59.0+ds-0.1 (Git) action needed
1.59.0+ds-0.1 4 (1 RC) pass | pass | fail 1.65.0
vienna-rna
2.7.0+dfsg-1 (Git) action needed
2.6.4+dfsg-1 1 2.7.0
virulencefinder 2.0.5-2 0 pass | pass | pass 3.1.0
visionegg 1.2.1-2 0 1.2.1
vmatch 2.3.1+dfsg-9 1 pass | pass | pass 2.3.1
volpack 1.0b3-10 1 pass | pass | pass 1.0b3
volview 3.4-3 0
vsearch 2.30.0-1 0 pass | pass | pass 2.30.0
vt 0.57721+ds-3 0 pass | pass | pass 0.57721
vtk-dicom 0.8.17-1 0 neutral | neutral | neutral 0.8.17
vtkedge 0.2.0~20110819-2 0
vxl 1.17.0.dfsg-1 0
wgsim 0.3.1-r13-1 0
wham-align 0.1.5-8 0 pass | pass | pass 0.1.5
wise 2.4.1-27 1 pass | pass | pass
wtdbg2 2.5-10 1 pass | pass | pass 2.5
xdffileio
1.0-1 (Git) action needed
0.3-4 1 0.No-Release
xenium 0.0.2+ds-8 0 0.0.2
xmedcon 0.25.1-gtk3+dfsg-1 2 0.25.2-gtk3
xpore 2.1-2 0 pass | pass 2.1
xxsds-dynamic 1.0~alpha.1+git20210426.548c6f7-2 0 1.0~alpha.1+git20240520.0540076
yaggo
1.5.11-3 (Git) action needed
1.5.11-2 0 pass | pass | pass 1.5.11
yaha 0.1.83-3 1 pass | pass | pass 0.1.83
yanagiba 1.0.0-5 0 pass | pass | pass 1.0.0
yanosim 0.1-6 0 neutral | neutral | neutral 0.1
zalign 0.9.1-5 0 0.9.1